RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 NISCHQ9Y2I1 1504 aa10.63□□□□□ -0.71
CTNNA1-241ENST00000524127 CCDC180Q9P1Z9 1646 aa9.44□□□□□ -0.9
CTNNA1-241ENST00000524127 ABCC9O60706 1549 aa9.27□□□□□ -0.93
CTNNA1-241ENST00000524127 AEBP2Q6ZN18 517 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-241ENST00000524127 ZCCHC6Q5VYS8 1495 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-241ENST00000524127 POTEDQ86YR6 584 aa8.86□□□□□ -0.99
CTNNA1-241ENST00000524127 RB1CC1Q8TDY2 1594 aa8.86□□□□□ -0.99
CTNNA1-241ENST00000524127 NACADO15069 1562 aa8.85□□□□□ -0.99
CTNNA1-241ENST00000524127 UNC13AQ9UPW8 1703 aa8.81□□□□□ -1
CTNNA1-241ENST00000524127 DCAF8L2P0C7V8 631 aa8.8□□□□□ -1
CTNNA1-241ENST00000524127 MYO15BQ96JP2 1530 aa8.8□□□□□ -1
CTNNA1-241ENST00000524127 DCAF1Q9Y4B6 1507 aa8.77□□□□□ -1.01
CTNNA1-241ENST00000524127 BICRAQ9NZM4 1560 aa8.72□□□□□ -1.01
CTNNA1-241ENST00000524127 PABPN1Q86U42 306 aaKnown RBP eCLIP8.67□□□□□ -1.02
CTNNA1-241ENST00000524127 SCRIBQ14160 1630 aa8.65□□□□□ -1.03
CTNNA1-241ENST00000524127 DNAJC5BQ9UF47 199 aa8.62□□□□□ -1.03
CTNNA1-241ENST00000524127 SHROOM4Q9ULL8 1493 aa8.47□□□□□ -1.05
CTNNA1-241ENST00000524127 EIF4G1Q04637 1599 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-241ENST00000524127 CC2D2AQ9P2K1 1620 aa8.4□□□□□ -1.06
CTNNA1-241ENST00000524127 CECR2Q9BXF3 1484 aa8.34□□□□□ -1.07
CTNNA1-241ENST00000524127 HRCP23327 699 aa8.29□□□□□ -1.08
CTNNA1-241ENST00000524127 CHIC1Q5VXU3 224 aa8.27□□□□□ -1.09
CTNNA1-241ENST00000524127 SMARCA4P51532 1647 aa8.26□□□□□ -1.09
CTNNA1-241ENST00000524127 MROH2BQ7Z745 1585 aa8.23□□□□□ -1.09
CTNNA1-241ENST00000524127 ATAD2BQ9ULI0 1458 aa8.21□□□□□ -1.09
CTNNA1-241ENST00000524127 NCAPD3P42695 1498 aa8.19□□□□□ -1.1
CTNNA1-241ENST00000524127 BAZ1AQ9NRL2 1556 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-241ENST00000524127 PEG3Q9GZU2 1588 aa8.18□□□□□ -1.1
CTNNA1-241ENST00000524127 WIZO95785 1651 aa8.15□□□□□ -1.1
CTNNA1-241ENST00000524127 SMARCA2P51531 1590 aa8.15□□□□□ -1.1
CTNNA1-241ENST00000524127 HMGXB3Q12766 1538 aa8.14□□□□□ -1.11
CTNNA1-241ENST00000524127 SUPT5HO00267 1087 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-241ENST00000524127 RSF1Q96T23 1441 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-241ENST00000524127 BAZ1BQ9UIG0 1483 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-241ENST00000524127 NESP48681 1621 aa8.07□□□□□ -1.12
CTNNA1-241ENST00000524127 PELP1Q8IZL8 1130 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-241ENST00000524127 PCGF6Q9BYE7 350 aa8.01□□□□□ -1.13
CTNNA1-241ENST00000524127 TOP2AP11388 1531 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-241ENST00000524127 KIF21AQ7Z4S6 1674 aa7.98□□□□□ -1.13
CTNNA1-241ENST00000524127 LAMC3Q9Y6N6 1575 aa7.96□□□□□ -1.14
CTNNA1-241ENST00000524127 ZEB1P37275 1124 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-241ENST00000524127 THOC2Q8NI27 1593 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-241ENST00000524127 CADPSQ9ULU8 1353 aa7.94□□□□□ -1.14
CTNNA1-241ENST00000524127 CCDC88BA6NC98 1476 aa7.94□□□□□ -1.14
CTNNA1-241ENST00000524127 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-241ENST00000524127 ERCC6Q03468 1493 aa7.92□□□□□ -1.14
CTNNA1-241ENST00000524127 PPARGC1BQ86YN6 1023 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-241ENST00000524127 CFTRP13569 1480 aa7.91□□□□□ -1.14
CTNNA1-241ENST00000524127 PRDM2Q13029 1718 aa7.88□□□□□ -1.15
CTNNA1-241ENST00000524127 CUX2O14529 1486 aa7.86□□□□□ -1.15
CTNNA1-241ENST00000524127 FANCD2Q9BXW9 1451 aa7.86□□□□□ -1.15
CTNNA1-241ENST00000524127 PDS5BQ9NTI5 1447 aa7.86□□□□□ -1.15
CTNNA1-241ENST00000524127 WDR62O43379 1518 aa7.83□□□□□ -1.16
CTNNA1-241ENST00000524127 URB2Q14146 1524 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-241ENST00000524127 MRC2Q9UBG0 1479 aa7.83□□□□□ -1.16
CTNNA1-241ENST00000524127 CEP164Q9UPV0 1460 aa7.82□□□□□ -1.16
CTNNA1-241ENST00000524127 LOC105371045A0A1W2PR82 267 aa7.78□□□□□ -1.16
CTNNA1-241ENST00000524127 MYT1Q01538 1121 aa7.78□□□□□ -1.16
CTNNA1-241ENST00000524127 TOPBP1Q92547 1522 aa7.75□□□□□ -1.17
CTNNA1-241ENST00000524127 SENP3Q9H4L4 574 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-241ENST00000524127 DNMBPQ6XZF7 1577 aa7.72□□□□□ -1.17
CTNNA1-241ENST00000524127 SCAF1Q9H7N4 1312 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-241ENST00000524127 CUX1P39880 1505 aa7.72□□□□□ -1.17
CTNNA1-241ENST00000524127 ZNF608Q9ULD9 1512 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-241ENST00000524127 TARBP1Q13395 1621 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-241ENST00000524127 POLA1P09884 1462 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-241ENST00000524127 RAD54L2Q9Y4B4 1467 aa7.68□□□□□ -1.18
CTNNA1-241ENST00000524127 ABCC8Q09428 1581 aa7.67□□□□□ -1.18
CTNNA1-241ENST00000524127 DNAJC5Q9H3Z4 198 aa7.67□□□□□ -1.18
CTNNA1-241ENST00000524127 FGD5Q6ZNL6 1462 aa7.66□□□□□ -1.18
CTNNA1-241ENST00000524127 IFT140Q96RY7 1462 aa7.66□□□□□ -1.18
CTNNA1-241ENST00000524127 SYNJ1O43426 1573 aa7.66□□□□□ -1.18
CTNNA1-241ENST00000524127 WDR97A6NE52 1622 aa7.65□□□□□ -1.18
CTNNA1-241ENST00000524127 EIF4G3O43432 1585 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-241ENST00000524127 TRIM41Q8WV44 630 aa7.64□□□□□ -1.19
CTNNA1-241ENST00000524127 AQRO60306 1485 aaKnown RBP eCLIP7.63□□□□□ -1.194e-6■■□□□ 13.8
CTNNA1-241ENST00000524127 BIVM-ERCC5R4GMW8 1640 aa7.63□□□□□ -1.19
CTNNA1-241ENST00000524127 ACIN1Q9UKV3 1341 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-241ENST00000524127 TOP2BQ02880 1626 aa7.62□□□□□ -1.19
CTNNA1-241ENST00000524127 SOGA1O94964 1423 aa7.61□□□□□ -1.19
CTNNA1-241ENST00000524127 TDRD9Q8NDG6 1382 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-241ENST00000524127 WRNQ14191 1432 aaPredicted RBP eCLIP7.6□□□□□ -1.19
CTNNA1-241ENST00000524127 CHD1O14646 1710 aa7.59□□□□□ -1.19
CTNNA1-241ENST00000524127 CENPBP07199 599 aaPredicted RBP7.58□□□□□ -1.2
CTNNA1-241ENST00000524127 ABCA5Q8WWZ7 1642 aa7.58□□□□□ -1.2
CTNNA1-241ENST00000524127 ABCA10Q8WWZ4 1543 aa7.57□□□□□ -1.2
CTNNA1-241ENST00000524127 PBRM1Q86U86 1689 aa7.57□□□□□ -1.2
CTNNA1-241ENST00000524127 SNAPC4Q5SXM2 1469 aa7.55□□□□□ -1.2
CTNNA1-241ENST00000524127 GAPVD1Q14C86 1478 aa7.53□□□□□ -1.2
CTNNA1-241ENST00000524127 GRIN2BQ13224 1484 aa7.52□□□□□ -1.21
CTNNA1-241ENST00000524127 NEUROD1Q13562 356 aa7.52□□□□□ -1.21
CTNNA1-241ENST00000524127 PHF23Q9BUL5 403 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-241ENST00000524127 OSCARQ8IYS5 282 aa7.5□□□□□ -1.21
CTNNA1-241ENST00000524127 ADAMTS12P58397 1594 aa7.5□□□□□ -1.21
CTNNA1-241ENST00000524127 MAGI1Q96QZ7 1491 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-241ENST00000524127 CLASP1Q7Z460 1538 aa7.49□□□□□ -1.21
CTNNA1-241ENST00000524127 DIEXFQ68CQ4 756 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-241ENST00000524127 CCER1Q8TC90 406 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-241ENST00000524127 SYNJ2O15056 1496 aa7.49□□□□□ -1.21
CTNNA1-241ENST00000524127 RIMBP3CA6NJZ7 1639 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms