RNA–Protein interactions for RNA: ENST00000523853.1

MCM4-214, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 354 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-214ENST00000523853 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
MCM4-214ENST00000523853 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
MCM4-214ENST00000523853 KANK4Q5T7N3 995 aaPredicted RBP13.5□□□□□ -0.25
MCM4-214ENST00000523853 KIF14Q15058 1648 aa13.5□□□□□ -0.25
MCM4-214ENST00000523853 GLI2P10070 1586 aa13.49□□□□□ -0.25
MCM4-214ENST00000523853 TROQ12816 1431 aaPredicted RBP13.49□□□□□ -0.25
MCM4-214ENST00000523853 FAM69CQ0P6D2 419 aa13.49□□□□□ -0.25
MCM4-214ENST00000523853 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
MCM4-214ENST00000523853 SUPT6HQ7KZ85 1726 aaKnown RBP13.46□□□□□ -0.25
MCM4-214ENST00000523853 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.26
MCM4-214ENST00000523853 MAP3K4Q9Y6R4 1608 aa13.45□□□□□ -0.26
MCM4-214ENST00000523853 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
MCM4-214ENST00000523853 TSPOAP1O95153 1857 aa13.44□□□□□ -0.26
MCM4-214ENST00000523853 MAGI3Q5TCQ9 1506 aa13.44□□□□□ -0.26
MCM4-214ENST00000523853 MYO5CQ9NQX4 1742 aa13.43□□□□□ -0.26
MCM4-214ENST00000523853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.43□□□□□ -0.26
MCM4-214ENST00000523853 DSG3P32926 999 aa13.42□□□□□ -0.26
MCM4-214ENST00000523853 CD109Q6YHK3 1445 aa13.41□□□□□ -0.26
MCM4-214ENST00000523853 TEX14Q8IWB6 1497 aa13.4□□□□□ -0.26
MCM4-214ENST00000523853 TTC37Q6PGP7 1564 aa13.4□□□□□ -0.26
MCM4-214ENST00000523853 ITSN2Q9NZM3 1697 aa13.4□□□□□ -0.26
MCM4-214ENST00000523853 CFAP74Q9C0B2 1584 aa13.38□□□□□ -0.27
MCM4-214ENST00000523853 CDC42BPAQ5VT25 1732 aa13.38□□□□□ -0.27
MCM4-214ENST00000523853 CCNB3Q8WWL7 1395 aa13.37□□□□□ -0.27
MCM4-214ENST00000523853 PREX2Q70Z35 1606 aa13.37□□□□□ -0.27
MCM4-214ENST00000523853 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
MCM4-214ENST00000523853 ARAP3Q8WWN8 1544 aa13.36□□□□□ -0.27
MCM4-214ENST00000523853 PLCH2O75038 1416 aa13.36□□□□□ -0.27
MCM4-214ENST00000523853 PPRC1Q5VV67 1664 aaKnown RBP13.35□□□□□ -0.27
MCM4-214ENST00000523853 CDC42BPBQ9Y5S2 1711 aa13.35□□□□□ -0.27
MCM4-214ENST00000523853 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
MCM4-214ENST00000523853 PHLDB1Q86UU1 1377 aa13.33□□□□□ -0.27
MCM4-214ENST00000523853 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
MCM4-214ENST00000523853 FANCAO15360 1455 aa13.32□□□□□ -0.28
MCM4-214ENST00000523853 NEO1Q92859 1461 aa13.32□□□□□ -0.28
MCM4-214ENST00000523853 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
MCM4-214ENST00000523853 GPATCH8Q9UKJ3 1502 aaKnown RBP13.32□□□□□ -0.28
MCM4-214ENST00000523853 ZNF777Q9ULD5 760 aaPredicted RBP13.31□□□□□ -0.28
MCM4-214ENST00000523853 ABCB7O75027 752 aa13.3□□□□□ -0.28
MCM4-214ENST00000523853 MYOM3Q5VTT5 1437 aa13.3□□□□□ -0.28
MCM4-214ENST00000523853 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
MCM4-214ENST00000523853 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
MCM4-214ENST00000523853 PLEKHH2Q8IVE3 1493 aa13.28□□□□□ -0.28
MCM4-214ENST00000523853 KDM6BO15054 1643 aa13.27□□□□□ -0.29
MCM4-214ENST00000523853 ADGRL1O94910 1474 aa13.26□□□□□ -0.29
MCM4-214ENST00000523853 ZNF644Q9H582 1327 aaPredicted RBP13.26□□□□□ -0.29
MCM4-214ENST00000523853 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
MCM4-214ENST00000523853 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
MCM4-214ENST00000523853 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
MCM4-214ENST00000523853 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
MCM4-214ENST00000523853 PTPN23Q9H3S7 1636 aa13.24□□□□□ -0.29
MCM4-214ENST00000523853 ABCC1P33527 1531 aa13.23□□□□□ -0.29
MCM4-214ENST00000523853 SCAPERQ9BY12 1400 aa13.23□□□□□ -0.29
MCM4-214ENST00000523853 FAM50AQ14320 339 aaKnown RBP13.23□□□□□ -0.29
MCM4-214ENST00000523853 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
MCM4-214ENST00000523853 CAMSAP2Q08AD1 1489 aa13.23□□□□□ -0.29
MCM4-214ENST00000523853 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
MCM4-214ENST00000523853 KIAA1107Q9UPP5 1409 aa13.22□□□□□ -0.29
MCM4-214ENST00000523853 RSPH4AQ5TD94 716 aa13.22□□□□□ -0.29
MCM4-214ENST00000523853 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.29
MCM4-214ENST00000523853 SYCP2Q9BX26 1530 aa13.2□□□□□ -0.3
MCM4-214ENST00000523853 RICTORQ6R327 1708 aa13.2□□□□□ -0.3
MCM4-214ENST00000523853 ITGAEP38570 1179 aa13.2□□□□□ -0.3
MCM4-214ENST00000523853 ZNF518AQ6AHZ1 1483 aa13.2□□□□□ -0.3
MCM4-214ENST00000523853 TCOF1Q13428 1488 aaKnown RBP13.19□□□□□ -0.3
MCM4-214ENST00000523853 POGZQ7Z3K3 1410 aa13.18□□□□□ -0.3
MCM4-214ENST00000523853 ARHGEF5Q12774 1597 aa13.18□□□□□ -0.3
MCM4-214ENST00000523853 RAPGEF3O95398 923 aa13.16□□□□□ -0.3
MCM4-214ENST00000523853 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
MCM4-214ENST00000523853 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
MCM4-214ENST00000523853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
MCM4-214ENST00000523853 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
MCM4-214ENST00000523853 RRBP1Q9P2E9 1410 aaKnown RBP13.15□□□□□ -0.3
MCM4-214ENST00000523853 ARHGEF12Q9NZN5 1544 aa13.15□□□□□ -0.3
MCM4-214ENST00000523853 DNMT1P26358 1616 aaKnown RBP13.15□□□□□ -0.3
MCM4-214ENST00000523853 TSPY4P0CV99 314 aa13.15□□□□□ -0.3
MCM4-214ENST00000523853 TSPY10P0CW01 314 aa13.15□□□□□ -0.3
MCM4-214ENST00000523853 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
MCM4-214ENST00000523853 MAGI2Q86UL8 1455 aa13.15□□□□□ -0.3
MCM4-214ENST00000523853 COL17A1Q9UMD9 1497 aaPredicted RBP13.15□□□□□ -0.3
MCM4-214ENST00000523853 KDM5CP41229 1560 aa13.15□□□□□ -0.3
MCM4-214ENST00000523853 FRMPD1Q5SYB0 1578 aa13.15□□□□□ -0.3
MCM4-214ENST00000523853 ZMYM4Q5VZL5 1548 aa13.14□□□□□ -0.31
MCM4-214ENST00000523853 MBD5Q9P267 1494 aa13.14□□□□□ -0.31
MCM4-214ENST00000523853 HECW2Q9P2P5 1572 aa13.14□□□□□ -0.31
MCM4-214ENST00000523853 CROCC2H7BZ55 1655 aa13.14□□□□□ -0.31
MCM4-214ENST00000523853 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
MCM4-214ENST00000523853 CHIC2Q9UKJ5 165 aa13.13□□□□□ -0.31
MCM4-214ENST00000523853 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
MCM4-214ENST00000523853 MLH3Q9UHC1 1453 aa13.11□□□□□ -0.31
MCM4-214ENST00000523853 ZFYVE16Q7Z3T8 1539 aa13.11□□□□□ -0.31
MCM4-214ENST00000523853 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
MCM4-214ENST00000523853 DAPK1P53355 1430 aa13.11□□□□□ -0.31
MCM4-214ENST00000523853 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
MCM4-214ENST00000523853 SHANK2Q9UPX8 1470 aa13.1□□□□□ -0.31
MCM4-214ENST00000523853 ATP7AQ04656 1500 aa13.1□□□□□ -0.31
MCM4-214ENST00000523853 INO80Q9ULG1 1556 aaPredicted RBP13.1□□□□□ -0.31
MCM4-214ENST00000523853 KIDINS220Q9ULH0 1771 aa13.09□□□□□ -0.31
MCM4-214ENST00000523853 ADGBQ8N7X0 1667 aa13.09□□□□□ -0.31
MCM4-214ENST00000523853 ABCC5O15440 1437 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms