RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
TRIM35-204ENST00000521283 MAGI3Q5TCQ9 1506 aa16.56■□□□□ 0.24
TRIM35-204ENST00000521283 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
TRIM35-204ENST00000521283 CD109Q6YHK3 1445 aa16.56■□□□□ 0.24
TRIM35-204ENST00000521283 KCNH8Q96L42 1107 aa16.56■□□□□ 0.24
TRIM35-204ENST00000521283 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
TRIM35-204ENST00000521283 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
TRIM35-204ENST00000521283 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
TRIM35-204ENST00000521283 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
TRIM35-204ENST00000521283 ABCA9Q8IUA7 1624 aa16.51■□□□□ 0.23
TRIM35-204ENST00000521283 HECW1Q76N89 1606 aa16.5■□□□□ 0.23
TRIM35-204ENST00000521283 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
TRIM35-204ENST00000521283 ARID3CA6NKF2 412 aa16.48■□□□□ 0.23
TRIM35-204ENST00000521283 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
TRIM35-204ENST00000521283 NEO1Q92859 1461 aa16.43■□□□□ 0.22
TRIM35-204ENST00000521283 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
TRIM35-204ENST00000521283 CLIP1P30622 1438 aa16.43■□□□□ 0.22
TRIM35-204ENST00000521283 ATP1B4Q9UN42 357 aaPredicted RBP16.42■□□□□ 0.22
TRIM35-204ENST00000521283 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
TRIM35-204ENST00000521283 CASKIN1Q8WXD9 1431 aa16.41■□□□□ 0.22
TRIM35-204ENST00000521283 CFAP74Q9C0B2 1584 aa16.4■□□□□ 0.22
TRIM35-204ENST00000521283 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
TRIM35-204ENST00000521283 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
TRIM35-204ENST00000521283 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
TRIM35-204ENST00000521283 CDK13Q14004 1512 aaKnown RBP16.38■□□□□ 0.21
TRIM35-204ENST00000521283 REM2Q8IYK8 340 aaPredicted RBP16.37■□□□□ 0.21
TRIM35-204ENST00000521283 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRIM35-204ENST00000521283 TROQ12816 1431 aaPredicted RBP16.35■□□□□ 0.21
TRIM35-204ENST00000521283 KIF14Q15058 1648 aa16.33■□□□□ 0.2
TRIM35-204ENST00000521283 FANCAO15360 1455 aa16.32■□□□□ 0.2
TRIM35-204ENST00000521283 PLCH2O75038 1416 aa16.32■□□□□ 0.2
TRIM35-204ENST00000521283 PCF11O94913 1555 aaKnown RBP16.32■□□□□ 0.2
TRIM35-204ENST00000521283 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
TRIM35-204ENST00000521283 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
TRIM35-204ENST00000521283 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
TRIM35-204ENST00000521283 LRRIQ1Q96JM4 1722 aa16.31■□□□□ 0.2
TRIM35-204ENST00000521283 MYO5CQ9NQX4 1742 aa16.31■□□□□ 0.2
TRIM35-204ENST00000521283 TTC37Q6PGP7 1564 aa16.3■□□□□ 0.2
TRIM35-204ENST00000521283 AKNAQ7Z591 1439 aa16.3■□□□□ 0.2
TRIM35-204ENST00000521283 CEP162Q5TB80 1403 aa16.29■□□□□ 0.2
TRIM35-204ENST00000521283 EFCAB2Q5VUJ9 269 aa16.29■□□□□ 0.2
TRIM35-204ENST00000521283 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
TRIM35-204ENST00000521283 MAGI2Q86UL8 1455 aa16.24■□□□□ 0.19
TRIM35-204ENST00000521283 RICTORQ6R327 1708 aa16.23■□□□□ 0.19
TRIM35-204ENST00000521283 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
TRIM35-204ENST00000521283 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
TRIM35-204ENST00000521283 KDM4FA0A1W2PPD8 638 aa16.22■□□□□ 0.19
TRIM35-204ENST00000521283 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
TRIM35-204ENST00000521283 ZMYM4Q5VZL5 1548 aa16.2■□□□□ 0.18
TRIM35-204ENST00000521283 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
TRIM35-204ENST00000521283 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
TRIM35-204ENST00000521283 FRMPD1Q5SYB0 1578 aa16.19■□□□□ 0.18
TRIM35-204ENST00000521283 MTUS2Q5JR59 1369 aa16.19■□□□□ 0.18
TRIM35-204ENST00000521283 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
TRIM35-204ENST00000521283 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
TRIM35-204ENST00000521283 CDC42BPBQ9Y5S2 1711 aa16.17■□□□□ 0.18
TRIM35-204ENST00000521283 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
TRIM35-204ENST00000521283 POGZQ7Z3K3 1410 aa16.17■□□□□ 0.18
TRIM35-204ENST00000521283 ZNF692Q9BU19 519 aaPredicted RBP16.16■□□□□ 0.18
TRIM35-204ENST00000521283 SSUH2Q9Y2M2 353 aa16.16■□□□□ 0.18
TRIM35-204ENST00000521283 ARHGEF40Q8TER5 1519 aa16.15■□□□□ 0.18
TRIM35-204ENST00000521283 VPS8Q8N3P4 1428 aa16.15■□□□□ 0.18
TRIM35-204ENST00000521283 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.18
TRIM35-204ENST00000521283 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
TRIM35-204ENST00000521283 ZFYVE16Q7Z3T8 1539 aa16.14■□□□□ 0.17
TRIM35-204ENST00000521283 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
TRIM35-204ENST00000521283 PLEKHH2Q8IVE3 1493 aa16.12■□□□□ 0.17
TRIM35-204ENST00000521283 MAP3K1Q13233 1512 aa16.11■□□□□ 0.17
TRIM35-204ENST00000521283 GPATCH8Q9UKJ3 1502 aaKnown RBP16.11■□□□□ 0.17
TRIM35-204ENST00000521283 KDM5CP41229 1560 aa16.1■□□□□ 0.17
TRIM35-204ENST00000521283 CFDP1Q9UEE9 299 aaPredicted RBP16.1■□□□□ 0.17
TRIM35-204ENST00000521283 ITSN2Q9NZM3 1697 aa16.1■□□□□ 0.17
TRIM35-204ENST00000521283 ARID4BQ4LE39 1312 aaPredicted RBP16.1■□□□□ 0.17
TRIM35-204ENST00000521283 KIAA1107Q9UPP5 1409 aa16.09■□□□□ 0.17
TRIM35-204ENST00000521283 ATP10AO60312 1499 aa16.09■□□□□ 0.17
TRIM35-204ENST00000521283 ABCC1P33527 1531 aa16.09■□□□□ 0.17
TRIM35-204ENST00000521283 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
TRIM35-204ENST00000521283 MLH3Q9UHC1 1453 aa16.08■□□□□ 0.16
TRIM35-204ENST00000521283 TIAM1Q13009 1591 aa16.08■□□□□ 0.16
TRIM35-204ENST00000521283 BCORL1Q5H9F3 1711 aa16.08■□□□□ 0.16
TRIM35-204ENST00000521283 SUPT6HQ7KZ85 1726 aaKnown RBP16.08■□□□□ 0.16
TRIM35-204ENST00000521283 HECW2Q9P2P5 1572 aa16.07■□□□□ 0.16
TRIM35-204ENST00000521283 ADAMTSL3P82987 1691 aa16.06■□□□□ 0.16
TRIM35-204ENST00000521283 AFAP1Q8N556 730 aa16.06■□□□□ 0.16
TRIM35-204ENST00000521283 C9orf84Q5VXU9 1444 aa16.05■□□□□ 0.16
TRIM35-204ENST00000521283 MYT1LQ9UL68 1186 aa16.05■□□□□ 0.16
TRIM35-204ENST00000521283 YEATS2Q9ULM3 1422 aa16.04■□□□□ 0.16
TRIM35-204ENST00000521283 RSPH4AQ5TD94 716 aa16.04■□□□□ 0.16
TRIM35-204ENST00000521283 ZNF777Q9ULD5 760 aaPredicted RBP16.04■□□□□ 0.16
TRIM35-204ENST00000521283 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
TRIM35-204ENST00000521283 FXR2P51116 673 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRIM35-204ENST00000521283 SAMD9LQ8IVG5 1584 aa16.02■□□□□ 0.16
TRIM35-204ENST00000521283 LRRC9Q6ZRR7 1453 aa16.02■□□□□ 0.15
TRIM35-204ENST00000521283 TRAPPC8Q9Y2L5 1435 aa16.01■□□□□ 0.15
TRIM35-204ENST00000521283 ARHGEF12Q9NZN5 1544 aa16■□□□□ 0.15
TRIM35-204ENST00000521283 NCOA2Q15596 1464 aa16■□□□□ 0.15
TRIM35-204ENST00000521283 SYCP2Q9BX26 1530 aa15.99■□□□□ 0.15
TRIM35-204ENST00000521283 SPAG9O60271 1321 aaKnown RBP15.98■□□□□ 0.15
TRIM35-204ENST00000521283 PTPRMP28827 1452 aa15.98■□□□□ 0.15
TRIM35-204ENST00000521283 DIP2CQ9Y2E4 1556 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms