RNA–Protein interactions for RNA: ENST00000521047.1

CLINT1-203, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-203ENST00000521047 KIF14Q15058 1648 aa12.9□□□□□ -0.34
CLINT1-203ENST00000521047 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
CLINT1-203ENST00000521047 NEO1Q92859 1461 aa12.89□□□□□ -0.35
CLINT1-203ENST00000521047 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
CLINT1-203ENST00000521047 ADGRL1O94910 1474 aa12.86□□□□□ -0.35
CLINT1-203ENST00000521047 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
CLINT1-203ENST00000521047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
CLINT1-203ENST00000521047 HNRNPUL2Q1KMD3 747 aaKnown RBP12.86□□□□□ -0.35
CLINT1-203ENST00000521047 CASKIN1Q8WXD9 1431 aa12.86□□□□□ -0.35
CLINT1-203ENST00000521047 CLIP1P30622 1438 aa12.85□□□□□ -0.35
CLINT1-203ENST00000521047 SIGLEC1Q9BZZ2 1709 aa12.84□□□□□ -0.35
CLINT1-203ENST00000521047 PHLDB1Q86UU1 1377 aa12.83□□□□□ -0.36
CLINT1-203ENST00000521047 TROQ12816 1431 aaPredicted RBP12.83□□□□□ -0.36
CLINT1-203ENST00000521047 RAPGEF3O95398 923 aa12.83□□□□□ -0.36
CLINT1-203ENST00000521047 FANCAO15360 1455 aa12.83□□□□□ -0.36
CLINT1-203ENST00000521047 MYO5CQ9NQX4 1742 aa12.82□□□□□ -0.36
CLINT1-203ENST00000521047 PLCH2O75038 1416 aa12.82□□□□□ -0.36
CLINT1-203ENST00000521047 AKNAQ7Z591 1439 aa12.82□□□□□ -0.36
CLINT1-203ENST00000521047 CDC42BPBQ9Y5S2 1711 aa12.82□□□□□ -0.36
CLINT1-203ENST00000521047 CFAP74Q9C0B2 1584 aa12.81□□□□□ -0.36
CLINT1-203ENST00000521047 FYCO1Q9BQS8 1478 aa12.81□□□□□ -0.36
CLINT1-203ENST00000521047 ZMYM4Q5VZL5 1548 aa12.8□□□□□ -0.36
CLINT1-203ENST00000521047 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
CLINT1-203ENST00000521047 ARHGEF40Q8TER5 1519 aa12.78□□□□□ -0.36
CLINT1-203ENST00000521047 CDC42BPAQ5VT25 1732 aa12.78□□□□□ -0.36
CLINT1-203ENST00000521047 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
CLINT1-203ENST00000521047 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.36
CLINT1-203ENST00000521047 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
CLINT1-203ENST00000521047 CEP162Q5TB80 1403 aa12.77□□□□□ -0.37
CLINT1-203ENST00000521047 PREX2Q70Z35 1606 aa12.77□□□□□ -0.37
CLINT1-203ENST00000521047 POGZQ7Z3K3 1410 aa12.75□□□□□ -0.37
CLINT1-203ENST00000521047 YEATS2Q9ULM3 1422 aa12.75□□□□□ -0.37
CLINT1-203ENST00000521047 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
CLINT1-203ENST00000521047 ARHGEF12Q9NZN5 1544 aa12.74□□□□□ -0.37
CLINT1-203ENST00000521047 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
CLINT1-203ENST00000521047 SCAPERQ9BY12 1400 aa12.73□□□□□ -0.37
CLINT1-203ENST00000521047 KDM5CP41229 1560 aa12.73□□□□□ -0.37
CLINT1-203ENST00000521047 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
CLINT1-203ENST00000521047 ABCC1P33527 1531 aa12.72□□□□□ -0.37
CLINT1-203ENST00000521047 ITSN2Q9NZM3 1697 aa12.71□□□□□ -0.37
CLINT1-203ENST00000521047 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
CLINT1-203ENST00000521047 CDK11AQ9UQ88 783 aaPredicted RBP12.71□□□□□ -0.37
CLINT1-203ENST00000521047 ARHGAP5Q13017 1502 aa12.71□□□□□ -0.38
CLINT1-203ENST00000521047 ZFYVE16Q7Z3T8 1539 aa12.71□□□□□ -0.38
CLINT1-203ENST00000521047 SAMD9LQ8IVG5 1584 aa12.7□□□□□ -0.38
CLINT1-203ENST00000521047 GPATCH8Q9UKJ3 1502 aaKnown RBP12.7□□□□□ -0.38
CLINT1-203ENST00000521047 MADDQ8WXG6 1647 aa12.7□□□□□ -0.38
CLINT1-203ENST00000521047 MAGI2Q86UL8 1455 aa12.69□□□□□ -0.38
CLINT1-203ENST00000521047 TRAPPC8Q9Y2L5 1435 aa12.68□□□□□ -0.38
CLINT1-203ENST00000521047 ABCA6Q8N139 1617 aa12.67□□□□□ -0.38
CLINT1-203ENST00000521047 EFCAB2Q5VUJ9 269 aa12.67□□□□□ -0.38
CLINT1-203ENST00000521047 TIAM1Q13009 1591 aa12.67□□□□□ -0.38
CLINT1-203ENST00000521047 DIP2CQ9Y2E4 1556 aa12.67□□□□□ -0.38
CLINT1-203ENST00000521047 KIDINS220Q9ULH0 1771 aa12.66□□□□□ -0.38
CLINT1-203ENST00000521047 PTPRMP28827 1452 aa12.65□□□□□ -0.38
CLINT1-203ENST00000521047 ZNF518AQ6AHZ1 1483 aa12.65□□□□□ -0.38
CLINT1-203ENST00000521047 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
CLINT1-203ENST00000521047 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
CLINT1-203ENST00000521047 AFAP1Q8N556 730 aa12.65□□□□□ -0.38
CLINT1-203ENST00000521047 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
CLINT1-203ENST00000521047 RIMS1Q86UR5 1692 aaKnown RBP12.64□□□□□ -0.39
CLINT1-203ENST00000521047 MLH3Q9UHC1 1453 aa12.64□□□□□ -0.39
CLINT1-203ENST00000521047 ATP10AO60312 1499 aa12.63□□□□□ -0.39
CLINT1-203ENST00000521047 REREQ9P2R6 1566 aa12.63□□□□□ -0.39
CLINT1-203ENST00000521047 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
CLINT1-203ENST00000521047 SYCP2Q9BX26 1530 aa12.62□□□□□ -0.39
CLINT1-203ENST00000521047 C9orf84Q5VXU9 1444 aa12.61□□□□□ -0.39
CLINT1-203ENST00000521047 FER1L4A9Z1Z3 1794 aa12.6□□□□□ -0.39
CLINT1-203ENST00000521047 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
CLINT1-203ENST00000521047 MTUS2Q5JR59 1369 aa12.59□□□□□ -0.39
CLINT1-203ENST00000521047 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
CLINT1-203ENST00000521047 MBD5Q9P267 1494 aa12.59□□□□□ -0.39
CLINT1-203ENST00000521047 APLP2Q06481 763 aa12.58□□□□□ -0.4
CLINT1-203ENST00000521047 NCOA2Q15596 1464 aa12.58□□□□□ -0.4
CLINT1-203ENST00000521047 SUPT6HQ7KZ85 1726 aaKnown RBP12.57□□□□□ -0.4
CLINT1-203ENST00000521047 KIAA1107Q9UPP5 1409 aa12.57□□□□□ -0.4
CLINT1-203ENST00000521047 LRRC9Q6ZRR7 1453 aa12.57□□□□□ -0.4
CLINT1-203ENST00000521047 ZNF644Q9H582 1327 aaPredicted RBP12.57□□□□□ -0.4
CLINT1-203ENST00000521047 AGLP35573 1532 aa12.57□□□□□ -0.4
CLINT1-203ENST00000521047 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
CLINT1-203ENST00000521047 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
CLINT1-203ENST00000521047 MAP3K1Q13233 1512 aa12.56□□□□□ -0.4
CLINT1-203ENST00000521047 ARID4BQ4LE39 1312 aaPredicted RBP12.56□□□□□ -0.4
CLINT1-203ENST00000521047 PLXNC1O60486 1568 aa12.56□□□□□ -0.4
CLINT1-203ENST00000521047 LMTK3Q96Q04 1460 aa12.55□□□□□ -0.4
CLINT1-203ENST00000521047 HNRNPMP52272 730 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLINT1-203ENST00000521047 KANK4Q5T7N3 995 aaPredicted RBP12.55□□□□□ -0.4
CLINT1-203ENST00000521047 ATP7AQ04656 1500 aa12.54□□□□□ -0.4
CLINT1-203ENST00000521047 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
CLINT1-203ENST00000521047 ZNF777Q9ULD5 760 aaPredicted RBP12.53□□□□□ -0.4
CLINT1-203ENST00000521047 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
CLINT1-203ENST00000521047 CAMSAP2Q08AD1 1489 aa12.52□□□□□ -0.41
CLINT1-203ENST00000521047 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
CLINT1-203ENST00000521047 MLECQ14165 292 aa12.51□□□□□ -0.41
CLINT1-203ENST00000521047 C3P01024 1663 aa12.51□□□□□ -0.41
CLINT1-203ENST00000521047 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
CLINT1-203ENST00000521047 ARHGEF5Q12774 1597 aa12.48□□□□□ -0.41
CLINT1-203ENST00000521047 SPAG9O60271 1321 aaKnown RBP12.48□□□□□ -0.41
CLINT1-203ENST00000521047 CAPN15O75808 1086 aa12.47□□□□□ -0.41
CLINT1-203ENST00000521047 A2MP01023 1474 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms