RNA–Protein interactions for RNA: ENST00000521047.1

CLINT1-203, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-203ENST00000521047 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
CLINT1-203ENST00000521047 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
CLINT1-203ENST00000521047 NISCHQ9Y2I1 1504 aa19.64■□□□□ 0.73
CLINT1-203ENST00000521047 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
CLINT1-203ENST00000521047 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
CLINT1-203ENST00000521047 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
CLINT1-203ENST00000521047 ABCC9O60706 1549 aa17.28■□□□□ 0.36
CLINT1-203ENST00000521047 RB1CC1Q8TDY2 1594 aa16.52■□□□□ 0.24
CLINT1-203ENST00000521047 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
CLINT1-203ENST00000521047 NACADO15069 1562 aa16.48■□□□□ 0.23
CLINT1-203ENST00000521047 MYO15BQ96JP2 1530 aa16.36■□□□□ 0.21
CLINT1-203ENST00000521047 FOXD1Q16676 465 aa16.34■□□□□ 0.21
CLINT1-203ENST00000521047 ZCCHC6Q5VYS8 1495 aaKnown RBP16.34■□□□□ 0.21
CLINT1-203ENST00000521047 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
CLINT1-203ENST00000521047 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
CLINT1-203ENST00000521047 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
CLINT1-203ENST00000521047 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
CLINT1-203ENST00000521047 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
CLINT1-203ENST00000521047 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLINT1-203ENST00000521047 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
CLINT1-203ENST00000521047 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
CLINT1-203ENST00000521047 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
CLINT1-203ENST00000521047 ADRA2BP18089 450 aa15.74■□□□□ 0.11
CLINT1-203ENST00000521047 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
CLINT1-203ENST00000521047 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
CLINT1-203ENST00000521047 CECR2Q9BXF3 1484 aa15.53■□□□□ 0.08
CLINT1-203ENST00000521047 PIAS4Q8N2W9 510 aaPredicted RBP15.39■□□□□ 0.05
CLINT1-203ENST00000521047 SMARCA4P51532 1647 aa15.29■□□□□ 0.04
CLINT1-203ENST00000521047 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
CLINT1-203ENST00000521047 ATAD2BQ9ULI0 1458 aa15.23■□□□□ 0.03
CLINT1-203ENST00000521047 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
CLINT1-203ENST00000521047 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
CLINT1-203ENST00000521047 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
CLINT1-203ENST00000521047 HMGXB3Q12766 1538 aa15.15■□□□□ 0.02
CLINT1-203ENST00000521047 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
CLINT1-203ENST00000521047 BAZ1BQ9UIG0 1483 aaKnown RBP15.03■□□□□ -0
CLINT1-203ENST00000521047 MSH5O43196 834 aa15.01□□□□□ -0.01
CLINT1-203ENST00000521047 WIZO95785 1651 aa15□□□□□ -0.01
CLINT1-203ENST00000521047 NESP48681 1621 aa14.97□□□□□ -0.01
CLINT1-203ENST00000521047 RSF1Q96T23 1441 aaPredicted RBP14.9□□□□□ -0.02
CLINT1-203ENST00000521047 LAMC3Q9Y6N6 1575 aa14.84□□□□□ -0.03
CLINT1-203ENST00000521047 ERCC6Q03468 1493 aa14.81□□□□□ -0.04
CLINT1-203ENST00000521047 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
CLINT1-203ENST00000521047 KIF21AQ7Z4S6 1674 aa14.8□□□□□ -0.04
CLINT1-203ENST00000521047 CUX2O14529 1486 aa14.78□□□□□ -0.04
CLINT1-203ENST00000521047 TOP2AP11388 1531 aaKnown RBP14.77□□□□□ -0.04
CLINT1-203ENST00000521047 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
CLINT1-203ENST00000521047 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
CLINT1-203ENST00000521047 CFTRP13569 1480 aa14.66□□□□□ -0.06
CLINT1-203ENST00000521047 CCDC88BA6NC98 1476 aa14.62□□□□□ -0.07
CLINT1-203ENST00000521047 WDR62O43379 1518 aa14.61□□□□□ -0.07
CLINT1-203ENST00000521047 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
CLINT1-203ENST00000521047 PRDM2Q13029 1718 aa14.58□□□□□ -0.07
CLINT1-203ENST00000521047 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
CLINT1-203ENST00000521047 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
CLINT1-203ENST00000521047 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
CLINT1-203ENST00000521047 DNAJC5Q9H3Z4 198 aa14.53□□□□□ -0.08
CLINT1-203ENST00000521047 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
CLINT1-203ENST00000521047 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
CLINT1-203ENST00000521047 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
CLINT1-203ENST00000521047 DNMBPQ6XZF7 1577 aa14.32□□□□□ -0.12
CLINT1-203ENST00000521047 ZNF608Q9ULD9 1512 aaPredicted RBP14.3□□□□□ -0.12
CLINT1-203ENST00000521047 KCNA4P22459 653 aa14.28□□□□□ -0.12
CLINT1-203ENST00000521047 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
CLINT1-203ENST00000521047 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
CLINT1-203ENST00000521047 ABCC8Q09428 1581 aa14.26□□□□□ -0.13
CLINT1-203ENST00000521047 IFT140Q96RY7 1462 aa14.25□□□□□ -0.13
CLINT1-203ENST00000521047 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
CLINT1-203ENST00000521047 POLA1P09884 1462 aaPredicted RBP14.24□□□□□ -0.13
CLINT1-203ENST00000521047 CUX1P39880 1505 aa14.23□□□□□ -0.13
CLINT1-203ENST00000521047 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
CLINT1-203ENST00000521047 RAD54L2Q9Y4B4 1467 aa14.18□□□□□ -0.14
CLINT1-203ENST00000521047 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
CLINT1-203ENST00000521047 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.143e-6■■■■■ 30.9
CLINT1-203ENST00000521047 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
CLINT1-203ENST00000521047 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
CLINT1-203ENST00000521047 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
CLINT1-203ENST00000521047 POTEDQ86YR6 584 aa14.12□□□□□ -0.15
CLINT1-203ENST00000521047 SOGA1O94964 1423 aa14.11□□□□□ -0.15
CLINT1-203ENST00000521047 CHD1O14646 1710 aa14.1□□□□□ -0.15
CLINT1-203ENST00000521047 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
CLINT1-203ENST00000521047 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
CLINT1-203ENST00000521047 SYNJ1O43426 1573 aa14.06□□□□□ -0.16
CLINT1-203ENST00000521047 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
CLINT1-203ENST00000521047 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
CLINT1-203ENST00000521047 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
CLINT1-203ENST00000521047 ABCA5Q8WWZ7 1642 aa14.03□□□□□ -0.16
CLINT1-203ENST00000521047 ABCA10Q8WWZ4 1543 aa14.02□□□□□ -0.16
CLINT1-203ENST00000521047 PBRM1Q86U86 1689 aa14.01□□□□□ -0.17
CLINT1-203ENST00000521047 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
CLINT1-203ENST00000521047 RIMBP3CA6NJZ7 1639 aa14□□□□□ -0.17
CLINT1-203ENST00000521047 RIMBP3BA6NNM3 1639 aa14□□□□□ -0.17
CLINT1-203ENST00000521047 RIMBP3Q9UFD9 1639 aa14□□□□□ -0.17
CLINT1-203ENST00000521047 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
CLINT1-203ENST00000521047 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
CLINT1-203ENST00000521047 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
CLINT1-203ENST00000521047 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
CLINT1-203ENST00000521047 GAPVD1Q14C86 1478 aa13.95□□□□□ -0.18
CLINT1-203ENST00000521047 MAGI1Q96QZ7 1491 aaPredicted RBP13.95□□□□□ -0.18
CLINT1-203ENST00000521047 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms