RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 MYO5CQ9NQX4 1742 aa22.84■■□□□ 1.25
SREK1-209ENST00000520953 ABCA9Q8IUA7 1624 aa22.83■■□□□ 1.25
SREK1-209ENST00000520953 CAMSAP2Q08AD1 1489 aa22.82■■□□□ 1.24
SREK1-209ENST00000520953 HRCP23327 699 aa22.82■■□□□ 1.24
SREK1-209ENST00000520953 ARHGAP5Q13017 1502 aa22.81■■□□□ 1.24
SREK1-209ENST00000520953 PTPRKQ15262 1439 aa22.81■■□□□ 1.24
SREK1-209ENST00000520953 PLCH2O75038 1416 aa22.79■■□□□ 1.24
SREK1-209ENST00000520953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.79■■□□□ 1.24
SREK1-209ENST00000520953 SAMD9LQ8IVG5 1584 aa22.78■■□□□ 1.24
SREK1-209ENST00000520953 DIP2BQ9P265 1576 aa22.75■■□□□ 1.23
SREK1-209ENST00000520953 HNRNPMP52272 730 aaKnown RBP eCLIP22.73■■□□□ 1.233e-7■■■■□ 25
SREK1-209ENST00000520953 CD109Q6YHK3 1445 aa22.73■■□□□ 1.23
SREK1-209ENST00000520953 FAM69CQ0P6D2 419 aa22.72■■□□□ 1.23
SREK1-209ENST00000520953 ABCC5O15440 1437 aa22.72■■□□□ 1.23
SREK1-209ENST00000520953 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
SREK1-209ENST00000520953 ARHGEF12Q9NZN5 1544 aa22.7■■□□□ 1.22
SREK1-209ENST00000520953 DAPK1P53355 1430 aa22.7■■□□□ 1.22
SREK1-209ENST00000520953 DNMT1P26358 1616 aaKnown RBP22.7■■□□□ 1.22
SREK1-209ENST00000520953 SYCP2Q9BX26 1530 aa22.7■■□□□ 1.22
SREK1-209ENST00000520953 EFCAB2Q5VUJ9 269 aa22.69■■□□□ 1.22
SREK1-209ENST00000520953 FANCAO15360 1455 aa22.69■■□□□ 1.22
SREK1-209ENST00000520953 MAP3K4Q9Y6R4 1608 aa22.68■■□□□ 1.22
SREK1-209ENST00000520953 MBD5Q9P267 1494 aa22.68■■□□□ 1.22
SREK1-209ENST00000520953 GLI2P10070 1586 aa22.68■■□□□ 1.22
SREK1-209ENST00000520953 ARAP3Q8WWN8 1544 aa22.68■■□□□ 1.22
SREK1-209ENST00000520953 KIF13AQ9H1H9 1805 aa22.66■■□□□ 1.22
SREK1-209ENST00000520953 ABCC1P33527 1531 aa22.65■■□□□ 1.22
SREK1-209ENST00000520953 TSPOAP1O95153 1857 aa22.63■■□□□ 1.21
SREK1-209ENST00000520953 CROCC2H7BZ55 1655 aa22.62■■□□□ 1.21
SREK1-209ENST00000520953 RRP7BPQ9NSQ0 103 aa22.62■■□□□ 1.21
SREK1-209ENST00000520953 TRAPPC8Q9Y2L5 1435 aa22.61■■□□□ 1.21
SREK1-209ENST00000520953 ARHGEF5Q12774 1597 aa22.6■■□□□ 1.21
SREK1-209ENST00000520953 AKNAQ7Z591 1439 aa22.6■■□□□ 1.21
SREK1-209ENST00000520953 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
SREK1-209ENST00000520953 PPRC1Q5VV67 1664 aaKnown RBP22.59■■□□□ 1.21
SREK1-209ENST00000520953 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
SREK1-209ENST00000520953 CCDC141Q6ZP82 1450 aa22.58■■□□□ 1.21
SREK1-209ENST00000520953 PLEKHH2Q8IVE3 1493 aa22.57■■□□□ 1.2
SREK1-209ENST00000520953 SCAPERQ9BY12 1400 aa22.56■■□□□ 1.2
SREK1-209ENST00000520953 AFAP1Q8N556 730 aa22.56■■□□□ 1.2
SREK1-209ENST00000520953 C9orf84Q5VXU9 1444 aa22.56■■□□□ 1.2
SREK1-209ENST00000520953 NAIPQ13075 1403 aa22.55■■□□□ 1.2
SREK1-209ENST00000520953 RAB3GAP2Q9H2M9 1393 aa22.55■■□□□ 1.2
SREK1-209ENST00000520953 SETD5Q9C0A6 1442 aa22.54■■□□□ 1.2
SREK1-209ENST00000520953 HFM1A2PYH4 1435 aa22.53■■□□□ 1.2
SREK1-209ENST00000520953 KDM6BO15054 1643 aa22.53■■□□□ 1.2
SREK1-209ENST00000520953 SHANK2Q9UPX8 1470 aa22.52■■□□□ 1.2
SREK1-209ENST00000520953 CFAP74Q9C0B2 1584 aa22.52■■□□□ 1.2
SREK1-209ENST00000520953 ADGBQ8N7X0 1667 aa22.52■■□□□ 1.2
SREK1-209ENST00000520953 TSPY4P0CV99 314 aa22.51■■□□□ 1.19
SREK1-209ENST00000520953 TSPY10P0CW01 314 aa22.51■■□□□ 1.19
SREK1-209ENST00000520953 NEO1Q92859 1461 aa22.51■■□□□ 1.19
SREK1-209ENST00000520953 NCOA1Q15788 1441 aa22.51■■□□□ 1.19
SREK1-209ENST00000520953 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
SREK1-209ENST00000520953 ADGRL2O95490 1459 aa22.49■■□□□ 1.19
SREK1-209ENST00000520953 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
SREK1-209ENST00000520953 GCC2Q8IWJ2 1684 aa22.48■■□□□ 1.19
SREK1-209ENST00000520953 RAPGEF3O95398 923 aa22.48■■□□□ 1.19
SREK1-209ENST00000520953 RSPH4AQ5TD94 716 aa22.48■■□□□ 1.19
SREK1-209ENST00000520953 MAST1Q9Y2H9 1570 aa22.46■■□□□ 1.19
SREK1-209ENST00000520953 ANKRD30AQ9BXX3 1397 aa22.45■■□□□ 1.18
SREK1-209ENST00000520953 POGZQ7Z3K3 1410 aa22.45■■□□□ 1.18
SREK1-209ENST00000520953 SPAG9O60271 1321 aaKnown RBP22.43■■□□□ 1.18
SREK1-209ENST00000520953 ZFYVE16Q7Z3T8 1539 aa22.43■■□□□ 1.18
SREK1-209ENST00000520953 TEX14Q8IWB6 1497 aa22.42■■□□□ 1.18
SREK1-209ENST00000520953 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
SREK1-209ENST00000520953 DENND4BO75064 1496 aaPredicted RBP22.41■■□□□ 1.18
SREK1-209ENST00000520953 ZNF518AQ6AHZ1 1483 aa22.41■■□□□ 1.18
SREK1-209ENST00000520953 INO80Q9ULG1 1556 aaPredicted RBP22.4■■□□□ 1.18
SREK1-209ENST00000520953 COL17A1Q9UMD9 1497 aaPredicted RBP22.4■■□□□ 1.18
SREK1-209ENST00000520953 FRMPD1Q5SYB0 1578 aa22.39■■□□□ 1.18
SREK1-209ENST00000520953 RICTORQ6R327 1708 aa22.39■■□□□ 1.18
SREK1-209ENST00000520953 ATP7AQ04656 1500 aa22.39■■□□□ 1.17
SREK1-209ENST00000520953 KDM5CP41229 1560 aa22.38■■□□□ 1.17
SREK1-209ENST00000520953 KIDINS220Q9ULH0 1771 aa22.38■■□□□ 1.17
SREK1-209ENST00000520953 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
SREK1-209ENST00000520953 MYT1LQ9UL68 1186 aa22.38■■□□□ 1.17
SREK1-209ENST00000520953 PLXNC1O60486 1568 aa22.38■■□□□ 1.17
SREK1-209ENST00000520953 ANKRD50Q9ULJ7 1429 aa22.36■■□□□ 1.17
SREK1-209ENST00000520953 DHX57Q6P158 1386 aaKnown RBP22.36■■□□□ 1.17
SREK1-209ENST00000520953 RTEL1-TNFRSF6BF6WH68 1400 aa22.35■■□□□ 1.17
SREK1-209ENST00000520953 HECW2Q9P2P5 1572 aa22.32■■□□□ 1.16
SREK1-209ENST00000520953 MLH3Q9UHC1 1453 aa22.31■■□□□ 1.16
SREK1-209ENST00000520953 ABCA6Q8N139 1617 aa22.29■■□□□ 1.16
SREK1-209ENST00000520953 TRIM52Q96A61 297 aa22.29■■□□□ 1.16
SREK1-209ENST00000520953 YEATS2Q9ULM3 1422 aa22.29■■□□□ 1.16
SREK1-209ENST00000520953 DUOX2Q9NRD8 1548 aa22.29■■□□□ 1.16
SREK1-209ENST00000520953 ZMYM4Q5VZL5 1548 aa22.25■■□□□ 1.15
SREK1-209ENST00000520953 DIP2CQ9Y2E4 1556 aa22.24■■□□□ 1.15
SREK1-209ENST00000520953 ERBINQ96RT1 1412 aa22.22■■□□□ 1.15
SREK1-209ENST00000520953 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
SREK1-209ENST00000520953 A2MP01023 1474 aa22.2■■□□□ 1.15
SREK1-209ENST00000520953 PZPP20742 1482 aa22.2■■□□□ 1.15
SREK1-209ENST00000520953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.143e-7■■□□□ 13.6
SREK1-209ENST00000520953 NUP155O75694 1391 aa22.18■■□□□ 1.14
SREK1-209ENST00000520953 FOXD1Q16676 465 aa22.18■■□□□ 1.14
SREK1-209ENST00000520953 MPHOSPH9Q99550 1183 aa22.18■■□□□ 1.14
SREK1-209ENST00000520953 ZEB1P37275 1124 aaPredicted RBP22.17■■□□□ 1.14
SREK1-209ENST00000520953 UNC13BO14795 1591 aa22.17■■□□□ 1.14
SREK1-209ENST00000520953 KIF3BO15066 747 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms