RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CFAP43Q8NDM7 1665 aa17.07■□□□□ 0.32
TRAPPC9-208ENST00000520857 CARD11Q9BXL7 1154 aa17.06■□□□□ 0.32
TRAPPC9-208ENST00000520857 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-208ENST00000520857 NCOA1Q15788 1441 aa17.05■□□□□ 0.32
TRAPPC9-208ENST00000520857 PRKCSHP14314 528 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC9-208ENST00000520857 PDE4AP27815 886 aa17.04■□□□□ 0.32
TRAPPC9-208ENST00000520857 RCAN3Q9UKA8 241 aa17.04■□□□□ 0.32
TRAPPC9-208ENST00000520857 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-208ENST00000520857 FANCD2Q9BXW9 1451 aa17.03■□□□□ 0.32
TRAPPC9-208ENST00000520857 EFCAB5A4FU69 1503 aa17.02■□□□□ 0.32
TRAPPC9-208ENST00000520857 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
TRAPPC9-208ENST00000520857 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC9-208ENST00000520857 PPM1GO15355 546 aaPredicted RBP17■□□□□ 0.31
TRAPPC9-208ENST00000520857 RRP1P56182 461 aaKnown RBP17■□□□□ 0.31
TRAPPC9-208ENST00000520857 USP47Q96K76 1375 aa17■□□□□ 0.31
TRAPPC9-208ENST00000520857 PLIN1O60240 522 aa16.99■□□□□ 0.31
TRAPPC9-208ENST00000520857 PKD2Q13563 968 aa16.99■□□□□ 0.31
TRAPPC9-208ENST00000520857 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
TRAPPC9-208ENST00000520857 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
TRAPPC9-208ENST00000520857 SKAP1Q86WV1 359 aa16.96■□□□□ 0.31
TRAPPC9-208ENST00000520857 CFDP1Q9UEE9 299 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-208ENST00000520857 ST20-MTHFSA0A0A6YYL1 179 aa16.94■□□□□ 0.3
TRAPPC9-208ENST00000520857 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
TRAPPC9-208ENST00000520857 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC9-208ENST00000520857 DCAF11Q8TEB1 546 aa16.93■□□□□ 0.3
TRAPPC9-208ENST00000520857 DDRGK1Q96HY6 314 aa16.93■□□□□ 0.3
TRAPPC9-208ENST00000520857 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
TRAPPC9-208ENST00000520857 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
TRAPPC9-208ENST00000520857 RGL3Q3MIN7 710 aa16.91■□□□□ 0.3
TRAPPC9-208ENST00000520857 SNAPC4Q5SXM2 1469 aa16.91■□□□□ 0.3
TRAPPC9-208ENST00000520857 CDCA7LQ96GN5 454 aa16.91■□□□□ 0.3
TRAPPC9-208ENST00000520857 EHBP1L1Q8N3D4 1523 aa16.9■□□□□ 0.3
TRAPPC9-208ENST00000520857 KDM5BQ9UGL1 1544 aa16.9■□□□□ 0.3
TRAPPC9-208ENST00000520857 RGS3P49796 1198 aa16.89■□□□□ 0.29
TRAPPC9-208ENST00000520857 BACH2Q9BYV9 841 aa16.89■□□□□ 0.29
TRAPPC9-208ENST00000520857 MYBBP1AQ9BQG0 1328 aaKnown RBP16.89■□□□□ 0.29
TRAPPC9-208ENST00000520857 USP35Q9P2H5 1018 aa16.89■□□□□ 0.29
TRAPPC9-208ENST00000520857 BRPF3Q9ULD4 1205 aa16.88■□□□□ 0.29
TRAPPC9-208ENST00000520857 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
TRAPPC9-208ENST00000520857 RALBP1Q15311 655 aa16.87■□□□□ 0.29
TRAPPC9-208ENST00000520857 CRBNQ96SW2 442 aa16.87■□□□□ 0.29
TRAPPC9-208ENST00000520857 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
TRAPPC9-208ENST00000520857 RPRD2Q5VT52 1461 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-208ENST00000520857 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
TRAPPC9-208ENST00000520857 NLRP13Q86W25 1043 aa16.85■□□□□ 0.29
TRAPPC9-208ENST00000520857 RNF123Q5XPI4 1314 aa16.84■□□□□ 0.29
TRAPPC9-208ENST00000520857 DHX29Q7Z478 1369 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-208ENST00000520857 ARXQ96QS3 562 aa16.84■□□□□ 0.29
TRAPPC9-208ENST00000520857 NESP48681 1621 aa16.84■□□□□ 0.29
TRAPPC9-208ENST00000520857 MS4A1P11836 297 aa16.83■□□□□ 0.29
TRAPPC9-208ENST00000520857 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
TRAPPC9-208ENST00000520857 GSE1Q14687 1217 aa16.83■□□□□ 0.28
TRAPPC9-208ENST00000520857 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
TRAPPC9-208ENST00000520857 CDK13Q14004 1512 aaKnown RBP16.83■□□□□ 0.28
TRAPPC9-208ENST00000520857 FBLN2P98095 1184 aa16.83■□□□□ 0.28
TRAPPC9-208ENST00000520857 KDM6BO15054 1643 aa16.83■□□□□ 0.28
TRAPPC9-208ENST00000520857 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.28
TRAPPC9-208ENST00000520857 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
TRAPPC9-208ENST00000520857 DENND4BO75064 1496 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC9-208ENST00000520857 UGGT2Q9NYU1 1516 aa16.81■□□□□ 0.28
TRAPPC9-208ENST00000520857 NUP155O75694 1391 aa16.81■□□□□ 0.28
TRAPPC9-208ENST00000520857 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
TRAPPC9-208ENST00000520857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.285e-6■■■■□ 19.5
TRAPPC9-208ENST00000520857 TSPY4P0CV99 314 aa16.8■□□□□ 0.28
TRAPPC9-208ENST00000520857 TSPY10P0CW01 314 aa16.8■□□□□ 0.28
TRAPPC9-208ENST00000520857 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
TRAPPC9-208ENST00000520857 DAPK1P53355 1430 aa16.79■□□□□ 0.28
TRAPPC9-208ENST00000520857 MIA2Q96PC5 1412 aa16.79■□□□□ 0.28
TRAPPC9-208ENST00000520857 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
TRAPPC9-208ENST00000520857 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRAPPC9-208ENST00000520857 BRD4O60885 1362 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC9-208ENST00000520857 SPATA31E1Q6ZUB1 1445 aa16.78■□□□□ 0.28
TRAPPC9-208ENST00000520857 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
TRAPPC9-208ENST00000520857 FRAT1Q92837 279 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-208ENST00000520857 EPRSP07814 1512 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-208ENST00000520857 MAGI3Q5TCQ9 1506 aa16.76■□□□□ 0.27
TRAPPC9-208ENST00000520857 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
TRAPPC9-208ENST00000520857 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
TRAPPC9-208ENST00000520857 CUL7Q14999 1698 aa16.75■□□□□ 0.27
TRAPPC9-208ENST00000520857 ARID4BQ4LE39 1312 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC9-208ENST00000520857 ABCC5O15440 1437 aa16.75■□□□□ 0.27
TRAPPC9-208ENST00000520857 CANXP27824 592 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-208ENST00000520857 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
TRAPPC9-208ENST00000520857 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-208ENST00000520857 C20orf194Q5TEA3 1177 aa16.73■□□□□ 0.27
TRAPPC9-208ENST00000520857 TCOF1Q13428 1488 aaKnown RBP16.72■□□□□ 0.27
TRAPPC9-208ENST00000520857 ANKRD30AQ9BXX3 1397 aa16.71■□□□□ 0.27
TRAPPC9-208ENST00000520857 KIAA1107Q9UPP5 1409 aa16.71■□□□□ 0.27
TRAPPC9-208ENST00000520857 PANK3Q9H999 370 aa16.71■□□□□ 0.26
TRAPPC9-208ENST00000520857 ROCK1Q13464 1354 aa16.7■□□□□ 0.26
TRAPPC9-208ENST00000520857 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC9-208ENST00000520857 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
TRAPPC9-208ENST00000520857 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-208ENST00000520857 SLKQ9H2G2 1235 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC9-208ENST00000520857 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
TRAPPC9-208ENST00000520857 KNSTRNQ9Y448 316 aa16.67■□□□□ 0.26
TRAPPC9-208ENST00000520857 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
TRAPPC9-208ENST00000520857 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC9-208ENST00000520857 GCC2Q8IWJ2 1684 aa16.66■□□□□ 0.26
TRAPPC9-208ENST00000520857 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms