RNA–Protein interactions for RNA: ENST00000520485.5

ARFGAP1-214, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-214ENST00000520485 FGD6Q6ZV73 1430 aa35.35■■■■□ 3.25
ARFGAP1-214ENST00000520485 CFDP1Q9UEE9 299 aaPredicted RBP35.32■■■■□ 3.25
ARFGAP1-214ENST00000520485 PPRC1Q5VV67 1664 aaKnown RBP35.31■■■■□ 3.24
ARFGAP1-214ENST00000520485 ZNF777Q9ULD5 760 aaPredicted RBP35.3■■■■□ 3.24
ARFGAP1-214ENST00000520485 PTPN23Q9H3S7 1636 aa35.29■■■■□ 3.24
ARFGAP1-214ENST00000520485 ARAP3Q8WWN8 1544 aa35.26■■■■□ 3.24
ARFGAP1-214ENST00000520485 SAMD9LQ8IVG5 1584 aa35.26■■■■□ 3.24
ARFGAP1-214ENST00000520485 ZNF644Q9H582 1327 aaPredicted RBP35.26■■■■□ 3.24
ARFGAP1-214ENST00000520485 FANCAO15360 1455 aa35.26■■■■□ 3.24
ARFGAP1-214ENST00000520485 MIA2Q96PC5 1412 aa35.25■■■■□ 3.23
ARFGAP1-214ENST00000520485 CAMSAP2Q08AD1 1489 aa35.24■■■■□ 3.23
ARFGAP1-214ENST00000520485 RRBP1Q9P2E9 1410 aaKnown RBP35.23■■■■□ 3.23
ARFGAP1-214ENST00000520485 FAM50AQ14320 339 aaKnown RBP35.2■■■■□ 3.23
ARFGAP1-214ENST00000520485 EFCAB2Q5VUJ9 269 aa35.19■■■■□ 3.22
ARFGAP1-214ENST00000520485 CFAP74Q9C0B2 1584 aa35.18■■■■□ 3.22
ARFGAP1-214ENST00000520485 TCOF1Q13428 1488 aaKnown RBP35.17■■■■□ 3.22
ARFGAP1-214ENST00000520485 ABCC1P33527 1531 aa35.15■■■■□ 3.22
ARFGAP1-214ENST00000520485 SYCP2Q9BX26 1530 aa35.15■■■■□ 3.22
ARFGAP1-214ENST00000520485 TEX14Q8IWB6 1497 aa35.14■■■■□ 3.22
ARFGAP1-214ENST00000520485 AKNAQ7Z591 1439 aa35.13■■■■□ 3.21
ARFGAP1-214ENST00000520485 ADGRL1O94910 1474 aa35.11■■■■□ 3.21
ARFGAP1-214ENST00000520485 NEO1Q92859 1461 aa35.1■■■■□ 3.21
ARFGAP1-214ENST00000520485 ARHGEF12Q9NZN5 1544 aa35.1■■■■□ 3.21
ARFGAP1-214ENST00000520485 HNRNPMP52272 730 aaKnown RBP eCLIP35.06■■■■□ 3.25e-16■■■□□ 15.4
ARFGAP1-214ENST00000520485 PLEKHH2Q8IVE3 1493 aa35.04■■■■□ 3.2
ARFGAP1-214ENST00000520485 SCAPERQ9BY12 1400 aa35.03■■■■□ 3.2
ARFGAP1-214ENST00000520485 ITGAEP38570 1179 aa35.03■■■■□ 3.2
ARFGAP1-214ENST00000520485 MBD5Q9P267 1494 aa35.01■■■■□ 3.19
ARFGAP1-214ENST00000520485 DNMT1P26358 1616 aaKnown RBP35■■■■□ 3.19
ARFGAP1-214ENST00000520485 KIAA1107Q9UPP5 1409 aa34.99■■■■□ 3.19
ARFGAP1-214ENST00000520485 TRAPPC8Q9Y2L5 1435 aa34.99■■■■□ 3.19
ARFGAP1-214ENST00000520485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.97■■■■□ 3.191e-7■■□□□ 12
ARFGAP1-214ENST00000520485 DAPK1P53355 1430 aa34.96■■■■□ 3.19
ARFGAP1-214ENST00000520485 ARHGEF5Q12774 1597 aa34.96■■■■□ 3.19
ARFGAP1-214ENST00000520485 TRIM26Q12899 539 aaPredicted RBP34.96■■■■□ 3.19
ARFGAP1-214ENST00000520485 CCDC141Q6ZP82 1450 aa34.95■■■■□ 3.19
ARFGAP1-214ENST00000520485 ABCC5O15440 1437 aa34.95■■■■□ 3.19
ARFGAP1-214ENST00000520485 CROCC2H7BZ55 1655 aa34.95■■■■□ 3.18
ARFGAP1-214ENST00000520485 POGZQ7Z3K3 1410 aa34.93■■■■□ 3.18
ARFGAP1-214ENST00000520485 PTPRKQ15262 1439 aa34.92■■■■□ 3.18
ARFGAP1-214ENST00000520485 FRMPD1Q5SYB0 1578 aa34.92■■■■□ 3.18
ARFGAP1-214ENST00000520485 DENND4BO75064 1496 aaPredicted RBP34.91■■■■□ 3.18
ARFGAP1-214ENST00000520485 COL17A1Q9UMD9 1497 aaPredicted RBP34.91■■■■□ 3.18
ARFGAP1-214ENST00000520485 RAPGEF3O95398 923 aa34.9■■■■□ 3.18
ARFGAP1-214ENST00000520485 AFAP1Q8N556 730 aa34.9■■■■□ 3.18
ARFGAP1-214ENST00000520485 RICTORQ6R327 1708 aa34.89■■■■□ 3.18
ARFGAP1-214ENST00000520485 ZNF518AQ6AHZ1 1483 aa34.86■■■■□ 3.17
ARFGAP1-214ENST00000520485 CHIC2Q9UKJ5 165 aa34.85■■■■□ 3.17
ARFGAP1-214ENST00000520485 KDM6BO15054 1643 aa34.83■■■■□ 3.17
ARFGAP1-214ENST00000520485 KDM5CP41229 1560 aa34.82■■■■□ 3.16
ARFGAP1-214ENST00000520485 C9orf84Q5VXU9 1444 aa34.82■■■■□ 3.16
ARFGAP1-214ENST00000520485 SHANK2Q9UPX8 1470 aa34.81■■■■□ 3.16
ARFGAP1-214ENST00000520485 ZFYVE16Q7Z3T8 1539 aa34.78■■■■□ 3.16
ARFGAP1-214ENST00000520485 PCGF6Q9BYE7 350 aa34.78■■■■□ 3.16
ARFGAP1-214ENST00000520485 ADGBQ8N7X0 1667 aa34.77■■■■□ 3.16
ARFGAP1-214ENST00000520485 INO80Q9ULG1 1556 aaPredicted RBP34.77■■■■□ 3.16
ARFGAP1-214ENST00000520485 MAST1Q9Y2H9 1570 aa34.76■■■■□ 3.16
ARFGAP1-214ENST00000520485 RSPH4AQ5TD94 716 aa34.76■■■■□ 3.15
ARFGAP1-214ENST00000520485 SPAG9O60271 1321 aaKnown RBP34.76■■■■□ 3.15
ARFGAP1-214ENST00000520485 HECW2Q9P2P5 1572 aa34.75■■■■□ 3.15
ARFGAP1-214ENST00000520485 TSPY4P0CV99 314 aa34.75■■■■□ 3.15
ARFGAP1-214ENST00000520485 TSPY10P0CW01 314 aa34.75■■■■□ 3.15
ARFGAP1-214ENST00000520485 ATP7AQ04656 1500 aa34.74■■■■□ 3.15
ARFGAP1-214ENST00000520485 MYT1LQ9UL68 1186 aa34.73■■■■□ 3.15
ARFGAP1-214ENST00000520485 ZMYM4Q5VZL5 1548 aa34.71■■■■□ 3.15
ARFGAP1-214ENST00000520485 KIDINS220Q9ULH0 1771 aa34.71■■■■□ 3.15
ARFGAP1-214ENST00000520485 RRP7BPQ9NSQ0 103 aa34.68■■■■□ 3.14
ARFGAP1-214ENST00000520485 ADGRL2O95490 1459 aa34.68■■■■□ 3.14
ARFGAP1-214ENST00000520485 ABCA6Q8N139 1617 aa34.66■■■■□ 3.14
ARFGAP1-214ENST00000520485 MLH3Q9UHC1 1453 aa34.65■■■■□ 3.14
ARFGAP1-214ENST00000520485 YEATS2Q9ULM3 1422 aa34.65■■■■□ 3.14
ARFGAP1-214ENST00000520485 PLXNC1O60486 1568 aa34.65■■■■□ 3.14
ARFGAP1-214ENST00000520485 ANKRD30AQ9BXX3 1397 aa34.63■■■■□ 3.13
ARFGAP1-214ENST00000520485 RTEL1-TNFRSF6BF6WH68 1400 aa34.63■■■■□ 3.13
ARFGAP1-214ENST00000520485 NCOA1Q15788 1441 aa34.63■■■■□ 3.13
ARFGAP1-214ENST00000520485 ROCK1Q13464 1354 aa34.62■■■■□ 3.13
ARFGAP1-214ENST00000520485 KIF15Q9NS87 1388 aa34.61■■■■□ 3.13
ARFGAP1-214ENST00000520485 DIP2CQ9Y2E4 1556 aa34.61■■■■□ 3.13
ARFGAP1-214ENST00000520485 GCC2Q8IWJ2 1684 aa34.58■■■■□ 3.13
ARFGAP1-214ENST00000520485 ARHGEF40Q8TER5 1519 aa34.57■■■■□ 3.13
ARFGAP1-214ENST00000520485 HFM1A2PYH4 1435 aa34.55■■■■□ 3.12
ARFGAP1-214ENST00000520485 NAIPQ13075 1403 aa34.55■■■■□ 3.12
ARFGAP1-214ENST00000520485 MAGI2Q86UL8 1455 aa34.55■■■■□ 3.12
ARFGAP1-214ENST00000520485 DUOX2Q9NRD8 1548 aa34.49■■■■□ 3.11
ARFGAP1-214ENST00000520485 A2MP01023 1474 aa34.47■■■■□ 3.11
ARFGAP1-214ENST00000520485 SETD5Q9C0A6 1442 aa34.45■■■■□ 3.11
ARFGAP1-214ENST00000520485 ANKRD50Q9ULJ7 1429 aa34.44■■■■□ 3.1
ARFGAP1-214ENST00000520485 SIGLEC1Q9BZZ2 1709 aa34.43■■■■□ 3.1
ARFGAP1-214ENST00000520485 ATP10AO60312 1499 aa34.42■■■■□ 3.1
ARFGAP1-214ENST00000520485 RAB3GAP2Q9H2M9 1393 aa34.41■■■■□ 3.1
ARFGAP1-214ENST00000520485 DHX29Q7Z478 1369 aaKnown RBP34.39■■■■□ 3.1
ARFGAP1-214ENST00000520485 ERBINQ96RT1 1412 aa34.39■■■■□ 3.1
ARFGAP1-214ENST00000520485 REREQ9P2R6 1566 aa34.34■■■■□ 3.09
ARFGAP1-214ENST00000520485 EIF2AK4Q9P2K8 1649 aaKnown RBP34.32■■■■□ 3.08
ARFGAP1-214ENST00000520485 KIF3BO15066 747 aa34.28■■■■□ 3.08
ARFGAP1-214ENST00000520485 BCORL1Q5H9F3 1711 aa34.24■■■■□ 3.07
ARFGAP1-214ENST00000520485 UNC13BO14795 1591 aa34.23■■■■□ 3.07
ARFGAP1-214ENST00000520485 AGLP35573 1532 aa34.22■■■■□ 3.07
ARFGAP1-214ENST00000520485 MROH1Q8NDA8 1641 aa34.22■■■■□ 3.07
ARFGAP1-214ENST00000520485 RNF17Q9BXT8 1623 aaKnown RBP34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms