RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 SAMD1Q6SPF0 538 aaPredicted RBP8.38□□□□□ -1.07
AP3B1-204ENST00000519295 CDC42BPBQ9Y5S2 1711 aa8.38□□□□□ -1.07
AP3B1-204ENST00000519295 PDIA4P13667 645 aaKnown RBP8.36□□□□□ -1.07
AP3B1-204ENST00000519295 TRIM41Q8WV44 630 aa8.36□□□□□ -1.07
AP3B1-204ENST00000519295 JPH4Q96JJ6 628 aa8.36□□□□□ -1.07
AP3B1-204ENST00000519295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.36□□□□□ -1.073e-8■□□□□ 10.1
AP3B1-204ENST00000519295 HECW1Q76N89 1606 aa8.36□□□□□ -1.07
AP3B1-204ENST00000519295 EHMT2Q96KQ7 1210 aa8.35□□□□□ -1.07
AP3B1-204ENST00000519295 INO80Q9ULG1 1556 aaPredicted RBP8.35□□□□□ -1.07
AP3B1-204ENST00000519295 STRCQ7RTU9 1775 aa8.35□□□□□ -1.07
AP3B1-204ENST00000519295 HOMEZQ8IX15 550 aa8.35□□□□□ -1.07
AP3B1-204ENST00000519295 PPP6R1Q9UPN7 881 aa8.35□□□□□ -1.07
AP3B1-204ENST00000519295 NUP153P49790 1475 aaKnown RBP8.35□□□□□ -1.07
AP3B1-204ENST00000519295 CDC42BPAQ5VT25 1732 aa8.34□□□□□ -1.07
AP3B1-204ENST00000519295 ATP10BO94823 1461 aa8.33□□□□□ -1.08
AP3B1-204ENST00000519295 PTPRGP23470 1445 aa8.33□□□□□ -1.08
AP3B1-204ENST00000519295 CYB5RLQ6IPT4 315 aa8.32□□□□□ -1.08
AP3B1-204ENST00000519295 ADGBQ8N7X0 1667 aa8.32□□□□□ -1.08
AP3B1-204ENST00000519295 FGD1P98174 961 aa8.31□□□□□ -1.08
AP3B1-204ENST00000519295 MADDQ8WXG6 1647 aa8.31□□□□□ -1.08
AP3B1-204ENST00000519295 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
AP3B1-204ENST00000519295 ZC3H13Q5T200 1668 aaKnown RBP8.3□□□□□ -1.08
AP3B1-204ENST00000519295 CAMSAP2Q08AD1 1489 aa8.3□□□□□ -1.08
AP3B1-204ENST00000519295 MAST1Q9Y2H9 1570 aa8.3□□□□□ -1.08
AP3B1-204ENST00000519295 DIP2CQ9Y2E4 1556 aa8.3□□□□□ -1.08
AP3B1-204ENST00000519295 CSRNP3Q8WYN3 585 aa8.29□□□□□ -1.08
AP3B1-204ENST00000519295 ABCC1P33527 1531 aa8.29□□□□□ -1.08
AP3B1-204ENST00000519295 C3P01024 1663 aa8.29□□□□□ -1.08
AP3B1-204ENST00000519295 PKNOX2Q96KN3 472 aa8.29□□□□□ -1.08
AP3B1-204ENST00000519295 KIDINS220Q9ULH0 1771 aa8.29□□□□□ -1.08
AP3B1-204ENST00000519295 EIF2AK4Q9P2K8 1649 aaKnown RBP8.28□□□□□ -1.08
AP3B1-204ENST00000519295 ABCA6Q8N139 1617 aa8.28□□□□□ -1.08
AP3B1-204ENST00000519295 RNF17Q9BXT8 1623 aaKnown RBP8.28□□□□□ -1.08
AP3B1-204ENST00000519295 KDM4FA0A1W2PPD8 638 aa8.27□□□□□ -1.09
AP3B1-204ENST00000519295 ANP32EQ9BTT0 268 aa8.26□□□□□ -1.09
AP3B1-204ENST00000519295 MLH3Q9UHC1 1453 aa8.25□□□□□ -1.09
AP3B1-204ENST00000519295 DEPDC5O75140 1603 aa8.25□□□□□ -1.09
AP3B1-204ENST00000519295 KIF14Q15058 1648 aa8.25□□□□□ -1.09
AP3B1-204ENST00000519295 POLR1AO95602 1720 aaPredicted RBP8.25□□□□□ -1.09
AP3B1-204ENST00000519295 RIMS1Q86UR5 1692 aaKnown RBP8.25□□□□□ -1.09
AP3B1-204ENST00000519295 ZFYVE16Q7Z3T8 1539 aa8.25□□□□□ -1.09
AP3B1-204ENST00000519295 CROCC2H7BZ55 1655 aa8.24□□□□□ -1.09
AP3B1-204ENST00000519295 MAP3K1Q13233 1512 aa8.23□□□□□ -1.09
AP3B1-204ENST00000519295 POGZQ7Z3K3 1410 aa8.23□□□□□ -1.09
AP3B1-204ENST00000519295 KDM5DQ9BY66 1539 aa8.22□□□□□ -1.09
AP3B1-204ENST00000519295 PTPRMP28827 1452 aa8.22□□□□□ -1.09
AP3B1-204ENST00000519295 CCDC18Q5T9S5 1454 aa8.22□□□□□ -1.09
AP3B1-204ENST00000519295 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.21□□□□□ -1.09
AP3B1-204ENST00000519295 ARHGEF5Q12774 1597 aa8.21□□□□□ -1.09
AP3B1-204ENST00000519295 RSPH6AQ9H0K4 717 aa8.21□□□□□ -1.1
AP3B1-204ENST00000519295 LTBP4Q8N2S1 1624 aa8.2□□□□□ -1.1
AP3B1-204ENST00000519295 MYO3AQ8NEV4 1616 aa8.2□□□□□ -1.1
AP3B1-204ENST00000519295 CNKSR2Q8WXI2 1034 aa8.2□□□□□ -1.1
AP3B1-204ENST00000519295 CHMP4AQ9BY43 222 aa8.2□□□□□ -1.1
AP3B1-204ENST00000519295 RSPH4AQ5TD94 716 aa8.2□□□□□ -1.1
AP3B1-204ENST00000519295 PLCH2O75038 1416 aa8.19□□□□□ -1.1
AP3B1-204ENST00000519295 BCL11BQ9C0K0 894 aaPredicted RBP8.19□□□□□ -1.1
AP3B1-204ENST00000519295 CD109Q6YHK3 1445 aa8.19□□□□□ -1.1
AP3B1-204ENST00000519295 FANCAO15360 1455 aa8.19□□□□□ -1.1
AP3B1-204ENST00000519295 FYCO1Q9BQS8 1478 aa8.19□□□□□ -1.1
AP3B1-204ENST00000519295 AAMPQ13685 434 aa8.19□□□□□ -1.1
AP3B1-204ENST00000519295 SYNMO15061 1565 aa8.18□□□□□ -1.1
AP3B1-204ENST00000519295 SAMD9LQ8IVG5 1584 aa8.18□□□□□ -1.1
AP3B1-204ENST00000519295 NPATQ14207 1427 aa8.17□□□□□ -1.1
AP3B1-204ENST00000519295 PPARGC1BQ86YN6 1023 aaKnown RBP8.17□□□□□ -1.1
AP3B1-204ENST00000519295 SALL2Q9Y467 1007 aaPredicted RBP8.17□□□□□ -1.1
AP3B1-204ENST00000519295 PLA2R1Q13018 1463 aa8.17□□□□□ -1.1
AP3B1-204ENST00000519295 PDE4CQ08493 712 aa8.16□□□□□ -1.1
AP3B1-204ENST00000519295 PTPRTO14522 1441 aa8.16□□□□□ -1.1
AP3B1-204ENST00000519295 C9orf84Q5VXU9 1444 aa8.15□□□□□ -1.1
AP3B1-204ENST00000519295 ARHGAP35Q9NRY4 1499 aa8.15□□□□□ -1.1
AP3B1-204ENST00000519295 MROH1Q8NDA8 1641 aa8.14□□□□□ -1.11
AP3B1-204ENST00000519295 PTPN23Q9H3S7 1636 aa8.14□□□□□ -1.11
AP3B1-204ENST00000519295 VWDEQ8N2E2 1590 aa8.14□□□□□ -1.11
AP3B1-204ENST00000519295 CASKIN1Q8WXD9 1431 aa8.14□□□□□ -1.11
AP3B1-204ENST00000519295 ZNF518AQ6AHZ1 1483 aa8.14□□□□□ -1.11
AP3B1-204ENST00000519295 KIAA1107Q9UPP5 1409 aa8.14□□□□□ -1.11
AP3B1-204ENST00000519295 TRIM26Q12899 539 aaPredicted RBP8.13□□□□□ -1.11
AP3B1-204ENST00000519295 ATP10AO60312 1499 aa8.12□□□□□ -1.11
AP3B1-204ENST00000519295 DENND4BO75064 1496 aaPredicted RBP8.12□□□□□ -1.11
AP3B1-204ENST00000519295 SETD1BQ9UPS6 1966 aaKnown RBP8.12□□□□□ -1.11
AP3B1-204ENST00000519295 TIAM1Q13009 1591 aa8.11□□□□□ -1.11
AP3B1-204ENST00000519295 NEURL4Q96JN8 1562 aa8.11□□□□□ -1.11
AP3B1-204ENST00000519295 LAMC1P11047 1609 aa8.11□□□□□ -1.11
AP3B1-204ENST00000519295 ALKQ9UM73 1620 aa8.11□□□□□ -1.11
AP3B1-204ENST00000519295 AKNAQ7Z591 1439 aa8.11□□□□□ -1.11
AP3B1-204ENST00000519295 FMN1Q68DA7 1419 aa8.11□□□□□ -1.11
AP3B1-204ENST00000519295 NPM2Q86SE8 214 aaKnown RBP8.11□□□□□ -1.11
AP3B1-204ENST00000519295 XIRP1Q702N8 1843 aaKnown RBP8.11□□□□□ -1.11
AP3B1-204ENST00000519295 TCOF1Q13428 1488 aaKnown RBP8.11□□□□□ -1.11
AP3B1-204ENST00000519295 RTEL1-TNFRSF6BF6WH68 1400 aa8.1□□□□□ -1.11
AP3B1-204ENST00000519295 CHRM1P11229 460 aaPredicted RBP8.1□□□□□ -1.11
AP3B1-204ENST00000519295 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
AP3B1-204ENST00000519295 MED14O60244 1454 aa8.09□□□□□ -1.11
AP3B1-204ENST00000519295 TROQ12816 1431 aaPredicted RBP8.09□□□□□ -1.11
AP3B1-204ENST00000519295 FAM69CQ0P6D2 419 aa8.09□□□□□ -1.11
AP3B1-204ENST00000519295 NWD1Q149M9 1564 aa8.09□□□□□ -1.11
AP3B1-204ENST00000519295 NCOA2Q15596 1464 aa8.09□□□□□ -1.11
AP3B1-204ENST00000519295 SPATA31D1Q6ZQQ2 1576 aa8.09□□□□□ -1.12
AP3B1-204ENST00000519295 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms