RNA–Protein interactions for RNA: ENST00000517624.1

VIRMA-203, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-203ENST00000517624 ARID3CA6NKF2 412 aa14.27□□□□□ -0.13
VIRMA-203ENST00000517624 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
VIRMA-203ENST00000517624 CDK13Q14004 1512 aaKnown RBP14.26□□□□□ -0.13
VIRMA-203ENST00000517624 PIP4P2Q8N4L2 257 aa14.25□□□□□ -0.13
VIRMA-203ENST00000517624 TIAM1Q13009 1591 aa14.25□□□□□ -0.13
VIRMA-203ENST00000517624 ZCCHC11Q5TAX3 1644 aaKnown RBP14.24□□□□□ -0.13
VIRMA-203ENST00000517624 NPM1P06748 294 aaKnown RBP eCLIP14.24□□□□□ -0.13
VIRMA-203ENST00000517624 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
VIRMA-203ENST00000517624 KANK4Q5T7N3 995 aaPredicted RBP14.22□□□□□ -0.13
VIRMA-203ENST00000517624 CDK11AQ9UQ88 783 aaPredicted RBP14.22□□□□□ -0.13
VIRMA-203ENST00000517624 LRRC9Q6ZRR7 1453 aa14.2□□□□□ -0.14
VIRMA-203ENST00000517624 PLEKHD1A6NEE1 506 aa14.2□□□□□ -0.14
VIRMA-203ENST00000517624 REM2Q8IYK8 340 aaPredicted RBP14.2□□□□□ -0.14
VIRMA-203ENST00000517624 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
VIRMA-203ENST00000517624 CCER1Q8TC90 406 aaPredicted RBP14.19□□□□□ -0.14
VIRMA-203ENST00000517624 TROQ12816 1431 aaPredicted RBP14.18□□□□□ -0.14
VIRMA-203ENST00000517624 ASXL2Q76L83 1435 aa14.18□□□□□ -0.14
VIRMA-203ENST00000517624 MAPKBP1O60336 1514 aa14.18□□□□□ -0.14
VIRMA-203ENST00000517624 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
VIRMA-203ENST00000517624 MTUS2Q5JR59 1369 aa14.17□□□□□ -0.14
VIRMA-203ENST00000517624 WDR7Q9Y4E6 1490 aa14.16□□□□□ -0.14
VIRMA-203ENST00000517624 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
VIRMA-203ENST00000517624 HAX1O00165 279 aa14.12□□□□□ -0.15
VIRMA-203ENST00000517624 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
VIRMA-203ENST00000517624 KIF14Q15058 1648 aa14.1□□□□□ -0.15
VIRMA-203ENST00000517624 NCOA2Q15596 1464 aa14.09□□□□□ -0.15
VIRMA-203ENST00000517624 ABCC10Q5T3U5 1492 aa14.09□□□□□ -0.15
VIRMA-203ENST00000517624 SUPT6HQ7KZ85 1726 aaKnown RBP14.09□□□□□ -0.15
VIRMA-203ENST00000517624 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
VIRMA-203ENST00000517624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.06□□□□□ -0.16
VIRMA-203ENST00000517624 RRBP1Q9P2E9 1410 aaKnown RBP14.06□□□□□ -0.16
VIRMA-203ENST00000517624 GLI2P10070 1586 aa14.05□□□□□ -0.16
VIRMA-203ENST00000517624 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.162e-8■■■□□ 15.9
VIRMA-203ENST00000517624 DIP2BQ9P265 1576 aa14.05□□□□□ -0.16
VIRMA-203ENST00000517624 ABCA9Q8IUA7 1624 aa14.04□□□□□ -0.16
VIRMA-203ENST00000517624 PHLDB1Q86UU1 1377 aa14.04□□□□□ -0.16
VIRMA-203ENST00000517624 TTC37Q6PGP7 1564 aa14.04□□□□□ -0.16
VIRMA-203ENST00000517624 EVX2Q03828 476 aa14.03□□□□□ -0.16
VIRMA-203ENST00000517624 FAM69CQ0P6D2 419 aa14.03□□□□□ -0.16
VIRMA-203ENST00000517624 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
VIRMA-203ENST00000517624 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
VIRMA-203ENST00000517624 GPATCH8Q9UKJ3 1502 aaKnown RBP14.03□□□□□ -0.16
VIRMA-203ENST00000517624 PLCH2O75038 1416 aa14.01□□□□□ -0.17
VIRMA-203ENST00000517624 MYOM3Q5VTT5 1437 aa14.01□□□□□ -0.17
VIRMA-203ENST00000517624 CD109Q6YHK3 1445 aa14□□□□□ -0.17
VIRMA-203ENST00000517624 KIF13AQ9H1H9 1805 aa14□□□□□ -0.17
VIRMA-203ENST00000517624 CDC42BPAQ5VT25 1732 aa14□□□□□ -0.17
VIRMA-203ENST00000517624 MAP3K4Q9Y6R4 1608 aa13.99□□□□□ -0.17
VIRMA-203ENST00000517624 ARAP3Q8WWN8 1544 aa13.99□□□□□ -0.17
VIRMA-203ENST00000517624 MIA2Q96PC5 1412 aa13.98□□□□□ -0.17
VIRMA-203ENST00000517624 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
VIRMA-203ENST00000517624 MYO5CQ9NQX4 1742 aa13.98□□□□□ -0.17
VIRMA-203ENST00000517624 FGD6Q6ZV73 1430 aa13.98□□□□□ -0.17
VIRMA-203ENST00000517624 PREX2Q70Z35 1606 aa13.97□□□□□ -0.17
VIRMA-203ENST00000517624 CFDP1Q9UEE9 299 aaPredicted RBP13.97□□□□□ -0.17
VIRMA-203ENST00000517624 CDC42BPBQ9Y5S2 1711 aa13.97□□□□□ -0.17
VIRMA-203ENST00000517624 ITSN2Q9NZM3 1697 aa13.97□□□□□ -0.17
VIRMA-203ENST00000517624 EFCAB2Q5VUJ9 269 aa13.95□□□□□ -0.18
VIRMA-203ENST00000517624 ARHGAP5Q13017 1502 aa13.94□□□□□ -0.18
VIRMA-203ENST00000517624 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
VIRMA-203ENST00000517624 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
VIRMA-203ENST00000517624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.92□□□□□ -0.18
VIRMA-203ENST00000517624 FANCAO15360 1455 aa13.92□□□□□ -0.18
VIRMA-203ENST00000517624 PPRC1Q5VV67 1664 aaKnown RBP13.91□□□□□ -0.18
VIRMA-203ENST00000517624 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
VIRMA-203ENST00000517624 ZNF777Q9ULD5 760 aaPredicted RBP13.91□□□□□ -0.18
VIRMA-203ENST00000517624 NEO1Q92859 1461 aa13.91□□□□□ -0.18
VIRMA-203ENST00000517624 SAMD9LQ8IVG5 1584 aa13.9□□□□□ -0.18
VIRMA-203ENST00000517624 AKNAQ7Z591 1439 aa13.9□□□□□ -0.19
VIRMA-203ENST00000517624 KIAA1107Q9UPP5 1409 aa13.9□□□□□ -0.19
VIRMA-203ENST00000517624 TSPOAP1O95153 1857 aa13.89□□□□□ -0.19
VIRMA-203ENST00000517624 CAMSAP2Q08AD1 1489 aa13.89□□□□□ -0.19
VIRMA-203ENST00000517624 TEX14Q8IWB6 1497 aa13.89□□□□□ -0.19
VIRMA-203ENST00000517624 PLEKHH2Q8IVE3 1493 aa13.88□□□□□ -0.19
VIRMA-203ENST00000517624 FAM50AQ14320 339 aaKnown RBP13.88□□□□□ -0.19
VIRMA-203ENST00000517624 CFAP74Q9C0B2 1584 aa13.88□□□□□ -0.19
VIRMA-203ENST00000517624 MBD5Q9P267 1494 aa13.87□□□□□ -0.19
VIRMA-203ENST00000517624 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
VIRMA-203ENST00000517624 ABCC1P33527 1531 aa13.86□□□□□ -0.19
VIRMA-203ENST00000517624 ARHGEF12Q9NZN5 1544 aa13.86□□□□□ -0.19
VIRMA-203ENST00000517624 HNRNPMP52272 730 aaKnown RBP eCLIP13.86□□□□□ -0.19
VIRMA-203ENST00000517624 SCAPERQ9BY12 1400 aa13.85□□□□□ -0.19
VIRMA-203ENST00000517624 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
VIRMA-203ENST00000517624 ADGRL1O94910 1474 aa13.85□□□□□ -0.19
VIRMA-203ENST00000517624 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
VIRMA-203ENST00000517624 SYCP2Q9BX26 1530 aa13.84□□□□□ -0.19
VIRMA-203ENST00000517624 ARHGEF5Q12774 1597 aa13.83□□□□□ -0.19
VIRMA-203ENST00000517624 ZNF316A6NFI3 1004 aaPredicted RBP13.83□□□□□ -0.2
VIRMA-203ENST00000517624 ABCC5O15440 1437 aa13.82□□□□□ -0.2
VIRMA-203ENST00000517624 TRAPPC8Q9Y2L5 1435 aa13.82□□□□□ -0.2
VIRMA-203ENST00000517624 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
VIRMA-203ENST00000517624 DIEXFQ68CQ4 756 aaKnown RBP13.81□□□□□ -0.2
VIRMA-203ENST00000517624 DAPK1P53355 1430 aa13.81□□□□□ -0.2
VIRMA-203ENST00000517624 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
VIRMA-203ENST00000517624 DENND4BO75064 1496 aaPredicted RBP13.8□□□□□ -0.2
VIRMA-203ENST00000517624 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
VIRMA-203ENST00000517624 AFAP1Q8N556 730 aa13.8□□□□□ -0.2
VIRMA-203ENST00000517624 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
VIRMA-203ENST00000517624 COL17A1Q9UMD9 1497 aaPredicted RBP13.8□□□□□ -0.2
VIRMA-203ENST00000517624 RAPGEF3O95398 923 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms