RNA–Protein interactions for RNA: ENST00000517624.1

VIRMA-203, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-203ENST00000517624 AEBP2Q6ZN18 517 aaPredicted RBP26.08■■□□□ 1.77
VIRMA-203ENST00000517624 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
VIRMA-203ENST00000517624 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
VIRMA-203ENST00000517624 PHF23Q9BUL5 403 aaPredicted RBP21.89■■□□□ 1.09
VIRMA-203ENST00000517624 NISCHQ9Y2I1 1504 aa21.46■■□□□ 1.03
VIRMA-203ENST00000517624 FOXD1Q16676 465 aa20.86■□□□□ 0.93
VIRMA-203ENST00000517624 POTEDQ86YR6 584 aa20.3■□□□□ 0.84
VIRMA-203ENST00000517624 MSH5O43196 834 aa19.62■□□□□ 0.73
VIRMA-203ENST00000517624 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
VIRMA-203ENST00000517624 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
VIRMA-203ENST00000517624 ADRA2BP18089 450 aa18.97■□□□□ 0.63
VIRMA-203ENST00000517624 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
VIRMA-203ENST00000517624 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.62
VIRMA-203ENST00000517624 ABCC9O60706 1549 aa18.15■□□□□ 0.5
VIRMA-203ENST00000517624 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
VIRMA-203ENST00000517624 DCAF1Q9Y4B6 1507 aa17.78■□□□□ 0.44
VIRMA-203ENST00000517624 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
VIRMA-203ENST00000517624 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
VIRMA-203ENST00000517624 NACADO15069 1562 aa17.7■□□□□ 0.42
VIRMA-203ENST00000517624 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
VIRMA-203ENST00000517624 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
VIRMA-203ENST00000517624 DMRT2Q9Y5R5 561 aa17.53■□□□□ 0.4
VIRMA-203ENST00000517624 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
VIRMA-203ENST00000517624 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
VIRMA-203ENST00000517624 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
VIRMA-203ENST00000517624 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
VIRMA-203ENST00000517624 SHROOM4Q9ULL8 1493 aa17.14■□□□□ 0.33
VIRMA-203ENST00000517624 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
VIRMA-203ENST00000517624 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
VIRMA-203ENST00000517624 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
VIRMA-203ENST00000517624 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
VIRMA-203ENST00000517624 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
VIRMA-203ENST00000517624 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
VIRMA-203ENST00000517624 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
VIRMA-203ENST00000517624 BAZ1AQ9NRL2 1556 aaPredicted RBP16.59■□□□□ 0.25
VIRMA-203ENST00000517624 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
VIRMA-203ENST00000517624 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
VIRMA-203ENST00000517624 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
VIRMA-203ENST00000517624 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
VIRMA-203ENST00000517624 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
VIRMA-203ENST00000517624 C1QBPQ07021 282 aaKnown RBP16.41■□□□□ 0.22
VIRMA-203ENST00000517624 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
VIRMA-203ENST00000517624 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
VIRMA-203ENST00000517624 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
VIRMA-203ENST00000517624 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
VIRMA-203ENST00000517624 WIZO95785 1651 aa16.37■□□□□ 0.21
VIRMA-203ENST00000517624 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
VIRMA-203ENST00000517624 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
VIRMA-203ENST00000517624 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
VIRMA-203ENST00000517624 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
VIRMA-203ENST00000517624 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
VIRMA-203ENST00000517624 BAZ1BQ9UIG0 1483 aaKnown RBP16.26■□□□□ 0.19
VIRMA-203ENST00000517624 TOP2AP11388 1531 aaKnown RBP16.21■□□□□ 0.19
VIRMA-203ENST00000517624 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
VIRMA-203ENST00000517624 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
VIRMA-203ENST00000517624 CFTRP13569 1480 aa15.87■□□□□ 0.13
VIRMA-203ENST00000517624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.13
VIRMA-203ENST00000517624 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.12
VIRMA-203ENST00000517624 NESP48681 1621 aa15.83■□□□□ 0.12
VIRMA-203ENST00000517624 POTEHQ6S545 545 aa15.75■□□□□ 0.11
VIRMA-203ENST00000517624 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
VIRMA-203ENST00000517624 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
VIRMA-203ENST00000517624 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
VIRMA-203ENST00000517624 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
VIRMA-203ENST00000517624 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
VIRMA-203ENST00000517624 KIF21AQ7Z4S6 1674 aa15.62■□□□□ 0.09
VIRMA-203ENST00000517624 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
VIRMA-203ENST00000517624 ABCC8Q09428 1581 aa15.54■□□□□ 0.08
VIRMA-203ENST00000517624 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
VIRMA-203ENST00000517624 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
VIRMA-203ENST00000517624 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
VIRMA-203ENST00000517624 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
VIRMA-203ENST00000517624 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
VIRMA-203ENST00000517624 URB2Q14146 1524 aaKnown RBP15.51■□□□□ 0.07
VIRMA-203ENST00000517624 CUX1P39880 1505 aa15.5■□□□□ 0.07
VIRMA-203ENST00000517624 DSG3P32926 999 aa15.5■□□□□ 0.07
VIRMA-203ENST00000517624 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
VIRMA-203ENST00000517624 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
VIRMA-203ENST00000517624 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
VIRMA-203ENST00000517624 WDR62O43379 1518 aa15.47■□□□□ 0.07
VIRMA-203ENST00000517624 SYNJ1O43426 1573 aa15.46■□□□□ 0.07
VIRMA-203ENST00000517624 TOP2BQ02880 1626 aa15.45■□□□□ 0.06
VIRMA-203ENST00000517624 BIVM-ERCC5R4GMW8 1640 aa15.44■□□□□ 0.06
VIRMA-203ENST00000517624 CAPN15O75808 1086 aa15.43■□□□□ 0.06
VIRMA-203ENST00000517624 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
VIRMA-203ENST00000517624 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
VIRMA-203ENST00000517624 POLA1P09884 1462 aaPredicted RBP15.37■□□□□ 0.05
VIRMA-203ENST00000517624 CUX2O14529 1486 aa15.34■□□□□ 0.05
VIRMA-203ENST00000517624 SOGA1O94964 1423 aa15.32■□□□□ 0.04
VIRMA-203ENST00000517624 RAD54L2Q9Y4B4 1467 aa15.3■□□□□ 0.04
VIRMA-203ENST00000517624 TARBP1Q13395 1621 aaKnown RBP15.28■□□□□ 0.04
VIRMA-203ENST00000517624 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
VIRMA-203ENST00000517624 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
VIRMA-203ENST00000517624 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
VIRMA-203ENST00000517624 ZNF608Q9ULD9 1512 aaPredicted RBP15.19■□□□□ 0.02
VIRMA-203ENST00000517624 TDRD9Q8NDG6 1382 aaKnown RBP15.19■□□□□ 0.02
VIRMA-203ENST00000517624 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
VIRMA-203ENST00000517624 AQRO60306 1485 aaKnown RBP eCLIP15.16■□□□□ 0.02
VIRMA-203ENST00000517624 RUSC2Q8N2Y8 1516 aa15.16■□□□□ 0.02
VIRMA-203ENST00000517624 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms