RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 KDM5BQ9UGL1 1544 aa11.7□□□□□ -0.54
GPBP1-208ENST00000514387 CALD1Q05682 793 aaKnown RBP11.69□□□□□ -0.54
GPBP1-208ENST00000514387 TEX2Q8IWB9 1127 aa11.69□□□□□ -0.54
GPBP1-208ENST00000514387 PRKRIP1Q9H875 184 aaPredicted RBP11.69□□□□□ -0.54
GPBP1-208ENST00000514387 POLR1AO95602 1720 aaPredicted RBP11.68□□□□□ -0.54
GPBP1-208ENST00000514387 PHLDB1Q86UU1 1377 aa11.68□□□□□ -0.54
GPBP1-208ENST00000514387 C14orf37Q86TY3 774 aa11.68□□□□□ -0.54
GPBP1-208ENST00000514387 NCOA1Q15788 1441 aa11.67□□□□□ -0.54
GPBP1-208ENST00000514387 HFM1A2PYH4 1435 aa11.67□□□□□ -0.54
GPBP1-208ENST00000514387 GTF2E1P29083 439 aaPredicted RBP11.66□□□□□ -0.54
GPBP1-208ENST00000514387 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
GPBP1-208ENST00000514387 BACH2Q9BYV9 841 aa11.65□□□□□ -0.54
GPBP1-208ENST00000514387 CCDC18Q5T9S5 1454 aa11.65□□□□□ -0.54
GPBP1-208ENST00000514387 MRS2Q9HD23 443 aa11.65□□□□□ -0.54
GPBP1-208ENST00000514387 VGFO15240 615 aaPredicted RBP11.64□□□□□ -0.55
GPBP1-208ENST00000514387 HIRIP3Q9BW71 556 aaPredicted RBP11.64□□□□□ -0.55
GPBP1-208ENST00000514387 AQRO60306 1485 aaKnown RBP eCLIP11.64□□□□□ -0.554e-7■□□□□ 10.1
GPBP1-208ENST00000514387 CCDC7Q96M83 1385 aa11.63□□□□□ -0.55
GPBP1-208ENST00000514387 PDE4AP27815 886 aa11.63□□□□□ -0.55
GPBP1-208ENST00000514387 HSPA5P11021 654 aaKnown RBP11.63□□□□□ -0.55
GPBP1-208ENST00000514387 PTPN23Q9H3S7 1636 aa11.62□□□□□ -0.55
GPBP1-208ENST00000514387 BRPF3Q9ULD4 1205 aa11.62□□□□□ -0.55
GPBP1-208ENST00000514387 FAM50AQ14320 339 aaKnown RBP11.6□□□□□ -0.55
GPBP1-208ENST00000514387 FYCO1Q9BQS8 1478 aa11.6□□□□□ -0.55
GPBP1-208ENST00000514387 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
GPBP1-208ENST00000514387 FMN1Q68DA7 1419 aa11.59□□□□□ -0.55
GPBP1-208ENST00000514387 AKNAQ7Z591 1439 aa11.59□□□□□ -0.55
GPBP1-208ENST00000514387 NFKBIBQ15653 356 aa11.58□□□□□ -0.55
GPBP1-208ENST00000514387 STAC3Q96MF2 364 aa11.58□□□□□ -0.55
GPBP1-208ENST00000514387 LAS1LQ9Y4W2 734 aaKnown RBP11.58□□□□□ -0.55
GPBP1-208ENST00000514387 UNC13AQ9UPW8 1703 aa11.58□□□□□ -0.56
GPBP1-208ENST00000514387 HECW1Q76N89 1606 aa11.58□□□□□ -0.56
GPBP1-208ENST00000514387 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
GPBP1-208ENST00000514387 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
GPBP1-208ENST00000514387 FGD6Q6ZV73 1430 aa11.57□□□□□ -0.56
GPBP1-208ENST00000514387 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
GPBP1-208ENST00000514387 ATAD2BQ9ULI0 1458 aa11.56□□□□□ -0.56
GPBP1-208ENST00000514387 FRAT1Q92837 279 aaPredicted RBP11.56□□□□□ -0.56
GPBP1-208ENST00000514387 CUX1P39880 1505 aa11.56□□□□□ -0.56
GPBP1-208ENST00000514387 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
GPBP1-208ENST00000514387 CCDC184Q52MB2 194 aa11.56□□□□□ -0.56
GPBP1-208ENST00000514387 KTN1Q86UP2 1357 aaKnown RBP11.56□□□□□ -0.56
GPBP1-208ENST00000514387 CDK11BP21127 795 aaKnown RBP11.55□□□□□ -0.56
GPBP1-208ENST00000514387 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
GPBP1-208ENST00000514387 HSP90AA2PQ14568 343 aaPredicted RBP11.55□□□□□ -0.56
GPBP1-208ENST00000514387 L1TD1Q5T7N2 865 aaKnown RBP11.55□□□□□ -0.56
GPBP1-208ENST00000514387 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
GPBP1-208ENST00000514387 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
GPBP1-208ENST00000514387 PDE3BQ13370 1112 aa11.54□□□□□ -0.56
GPBP1-208ENST00000514387 CASKIN1Q8WXD9 1431 aa11.54□□□□□ -0.56
GPBP1-208ENST00000514387 NAIPQ13075 1403 aa11.54□□□□□ -0.56
GPBP1-208ENST00000514387 PCF11O94913 1555 aaKnown RBP11.54□□□□□ -0.56
GPBP1-208ENST00000514387 MIA2Q96PC5 1412 aa11.53□□□□□ -0.56
GPBP1-208ENST00000514387 RRP1P56182 461 aaKnown RBP11.53□□□□□ -0.56
GPBP1-208ENST00000514387 ARID3AQ99856 593 aa11.53□□□□□ -0.56
GPBP1-208ENST00000514387 INSRP06213 1382 aa11.52□□□□□ -0.56
GPBP1-208ENST00000514387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.52□□□□□ -0.56
GPBP1-208ENST00000514387 GCC2Q8IWJ2 1684 aa11.52□□□□□ -0.57
GPBP1-208ENST00000514387 SPATA31E1Q6ZUB1 1445 aa11.51□□□□□ -0.57
GPBP1-208ENST00000514387 CHMP4BQ9H444 224 aaKnown RBP11.5□□□□□ -0.57
GPBP1-208ENST00000514387 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
GPBP1-208ENST00000514387 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
GPBP1-208ENST00000514387 ZMYM4Q5VZL5 1548 aa11.5□□□□□ -0.57
GPBP1-208ENST00000514387 LRPPRCP42704 1394 aaKnown RBP11.49□□□□□ -0.57
GPBP1-208ENST00000514387 DHX29Q7Z478 1369 aaKnown RBP11.48□□□□□ -0.57
GPBP1-208ENST00000514387 SECISBP2LQ93073 1101 aaKnown RBP11.48□□□□□ -0.57
GPBP1-208ENST00000514387 CANXP27824 592 aaKnown RBP11.47□□□□□ -0.57
GPBP1-208ENST00000514387 THOC2Q8NI27 1593 aaKnown RBP11.47□□□□□ -0.57
GPBP1-208ENST00000514387 KIF7Q2M1P5 1343 aa11.46□□□□□ -0.57
GPBP1-208ENST00000514387 BRD4O60885 1362 aaPredicted RBP11.46□□□□□ -0.57
GPBP1-208ENST00000514387 IGF1RP08069 1367 aa11.46□□□□□ -0.57
GPBP1-208ENST00000514387 PNISRQ8TF01 805 aaKnown RBP11.46□□□□□ -0.58
GPBP1-208ENST00000514387 HSP90AA1P07900 732 aaKnown RBP11.45□□□□□ -0.58
GPBP1-208ENST00000514387 CLCN1P35523 988 aa11.45□□□□□ -0.58
GPBP1-208ENST00000514387 RCAN3Q9UKA8 241 aa11.44□□□□□ -0.58
GPBP1-208ENST00000514387 MYOM3Q5VTT5 1437 aa11.44□□□□□ -0.58
GPBP1-208ENST00000514387 MMP14P50281 582 aa11.44□□□□□ -0.58
GPBP1-208ENST00000514387 TCOF1Q13428 1488 aaKnown RBP11.44□□□□□ -0.58
GPBP1-208ENST00000514387 RPRD2Q5VT52 1461 aaKnown RBP11.44□□□□□ -0.58
GPBP1-208ENST00000514387 PTPRKQ15262 1439 aa11.43□□□□□ -0.58
GPBP1-208ENST00000514387 EXOC6Q8TAG9 804 aa11.43□□□□□ -0.58
GPBP1-208ENST00000514387 CARMIL1Q5VZK9 1371 aa11.43□□□□□ -0.58
GPBP1-208ENST00000514387 BICRAQ9NZM4 1560 aa11.42□□□□□ -0.58
GPBP1-208ENST00000514387 NCLP19338 710 aaKnown RBP11.42□□□□□ -0.58
GPBP1-208ENST00000514387 CNGB1Q14028 1251 aaPredicted RBP11.42□□□□□ -0.58
GPBP1-208ENST00000514387 FAM161AQ3B820 660 aa11.42□□□□□ -0.58
GPBP1-208ENST00000514387 TPRNQ4KMQ1 711 aa11.42□□□□□ -0.58
GPBP1-208ENST00000514387 PLEKHH2Q8IVE3 1493 aa11.42□□□□□ -0.58
GPBP1-208ENST00000514387 PDCL3Q9H2J4 239 aa11.41□□□□□ -0.58
GPBP1-208ENST00000514387 PNNQ9H307 717 aaKnown RBP11.41□□□□□ -0.58
GPBP1-208ENST00000514387 SUPT6HQ7KZ85 1726 aaKnown RBP11.41□□□□□ -0.58
GPBP1-208ENST00000514387 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
GPBP1-208ENST00000514387 TEX14Q8IWB6 1497 aa11.41□□□□□ -0.58
GPBP1-208ENST00000514387 RALBP1Q15311 655 aa11.4□□□□□ -0.58
GPBP1-208ENST00000514387 DCAF11Q8TEB1 546 aa11.4□□□□□ -0.58
GPBP1-208ENST00000514387 EHBP1L1Q8N3D4 1523 aa11.4□□□□□ -0.58
GPBP1-208ENST00000514387 DENND4BO75064 1496 aaPredicted RBP11.4□□□□□ -0.58
GPBP1-208ENST00000514387 CENPQQ7L2Z9 268 aaPredicted RBP11.4□□□□□ -0.59
GPBP1-208ENST00000514387 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.59
GPBP1-208ENST00000514387 KIF15Q9NS87 1388 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms