RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 HNRNPUL2Q1KMD3 747 aaKnown RBP5.83□□□□□ -1.48
CHD1-211ENST00000514344 TTC37Q6PGP7 1564 aa5.83□□□□□ -1.48
CHD1-211ENST00000514344 NEO1Q92859 1461 aa5.83□□□□□ -1.48
CHD1-211ENST00000514344 ZNF335Q9H4Z2 1342 aaPredicted RBP5.82□□□□□ -1.48
CHD1-211ENST00000514344 AKNAQ7Z591 1439 aa5.82□□□□□ -1.48
CHD1-211ENST00000514344 ABCA9Q8IUA7 1624 aa5.82□□□□□ -1.48
CHD1-211ENST00000514344 ABCA8O94911 1581 aa5.82□□□□□ -1.48
CHD1-211ENST00000514344 PTPRTO14522 1441 aa5.82□□□□□ -1.48
CHD1-211ENST00000514344 DENND4BO75064 1496 aaPredicted RBP5.82□□□□□ -1.48
CHD1-211ENST00000514344 IQSEC2Q5JU85 1478 aa5.81□□□□□ -1.48
CHD1-211ENST00000514344 RICTORQ6R327 1708 aa5.81□□□□□ -1.48
CHD1-211ENST00000514344 P3H3Q8IVL6 736 aa5.8□□□□□ -1.48
CHD1-211ENST00000514344 ATP10BO94823 1461 aa5.8□□□□□ -1.48
CHD1-211ENST00000514344 ZFYVE16Q7Z3T8 1539 aa5.8□□□□□ -1.48
CHD1-211ENST00000514344 DCAF8L1A6NGE4 600 aa5.79□□□□□ -1.48
CHD1-211ENST00000514344 SETD1BQ9UPS6 1966 aaKnown RBP5.79□□□□□ -1.48
CHD1-211ENST00000514344 EFCAB5A4FU69 1503 aa5.78□□□□□ -1.48
CHD1-211ENST00000514344 ARHGEF12Q9NZN5 1544 aa5.78□□□□□ -1.48
CHD1-211ENST00000514344 RAPGEF2Q9Y4G8 1499 aa5.78□□□□□ -1.48
CHD1-211ENST00000514344 FHOD3Q2V2M9 1422 aa5.77□□□□□ -1.48
CHD1-211ENST00000514344 NCKAP5LQ9HCH0 1330 aa5.77□□□□□ -1.49
CHD1-211ENST00000514344 GOLGA3Q08378 1498 aa5.76□□□□□ -1.49
CHD1-211ENST00000514344 HECW1Q76N89 1606 aa5.76□□□□□ -1.49
CHD1-211ENST00000514344 NCOA1Q15788 1441 aa5.76□□□□□ -1.49
CHD1-211ENST00000514344 MYT1LQ9UL68 1186 aa5.76□□□□□ -1.49
CHD1-211ENST00000514344 FAM9AQ8IZU1 332 aaPredicted RBP5.76□□□□□ -1.49
CHD1-211ENST00000514344 ESF1Q9H501 851 aaKnown RBP5.76□□□□□ -1.49
CHD1-211ENST00000514344 ZMYM4Q5VZL5 1548 aa5.75□□□□□ -1.49
CHD1-211ENST00000514344 CAMSAP1Q5T5Y3 1602 aa5.75□□□□□ -1.49
CHD1-211ENST00000514344 TOM1O60784 492 aa5.75□□□□□ -1.49
CHD1-211ENST00000514344 RGS17Q9UGC6 210 aaPredicted RBP5.75□□□□□ -1.49
CHD1-211ENST00000514344 MAGI2Q86UL8 1455 aa5.74□□□□□ -1.49
CHD1-211ENST00000514344 C3P01024 1663 aa5.74□□□□□ -1.49
CHD1-211ENST00000514344 CTTNBP2Q8WZ74 1663 aa5.74□□□□□ -1.49
CHD1-211ENST00000514344 C9orf84Q5VXU9 1444 aa5.74□□□□□ -1.49
CHD1-211ENST00000514344 ATP10AO60312 1499 aa5.74□□□□□ -1.49
CHD1-211ENST00000514344 SCAPERQ9BY12 1400 aa5.74□□□□□ -1.49
CHD1-211ENST00000514344 TRAPPC8Q9Y2L5 1435 aa5.73□□□□□ -1.49
CHD1-211ENST00000514344 RANGAP1P46060 587 aaPredicted RBP5.72□□□□□ -1.49
CHD1-211ENST00000514344 CFAP74Q9C0B2 1584 aa5.72□□□□□ -1.49
CHD1-211ENST00000514344 PLEKHD1A6NEE1 506 aa5.72□□□□□ -1.49
CHD1-211ENST00000514344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHD1-211ENST00000514344 POTEAQ6S8J7 498 aa5.71□□□□□ -1.5
CHD1-211ENST00000514344 AFAP1Q8N556 730 aa5.7□□□□□ -1.5
CHD1-211ENST00000514344 SETD1AO15047 1707 aaKnown RBP5.7□□□□□ -1.5
CHD1-211ENST00000514344 RAPGEF6Q8TEU7 1601 aa5.7□□□□□ -1.5
CHD1-211ENST00000514344 NUP153P49790 1475 aaKnown RBP5.69□□□□□ -1.5
CHD1-211ENST00000514344 SUPT6HQ7KZ85 1726 aaKnown RBP5.69□□□□□ -1.5
CHD1-211ENST00000514344 PKD2Q13563 968 aa5.69□□□□□ -1.5
CHD1-211ENST00000514344 TCOF1Q13428 1488 aaKnown RBP5.66□□□□□ -1.5
CHD1-211ENST00000514344 PTPRKQ15262 1439 aa5.66□□□□□ -1.5
CHD1-211ENST00000514344 ALKQ9UM73 1620 aa5.66□□□□□ -1.5
CHD1-211ENST00000514344 DIP2CQ9Y2E4 1556 aa5.66□□□□□ -1.5
CHD1-211ENST00000514344 ZNF518AQ6AHZ1 1483 aa5.66□□□□□ -1.5
CHD1-211ENST00000514344 ZMYM3Q14202 1370 aa5.66□□□□□ -1.5
CHD1-211ENST00000514344 EFCAB2Q5VUJ9 269 aa5.66□□□□□ -1.5
CHD1-211ENST00000514344 SHANK2Q9UPX8 1470 aa5.66□□□□□ -1.5
CHD1-211ENST00000514344 PLCH2O75038 1416 aa5.66□□□□□ -1.5
CHD1-211ENST00000514344 PLA2R1Q13018 1463 aa5.65□□□□□ -1.5
CHD1-211ENST00000514344 CPS1P31327 1500 aa5.65□□□□□ -1.5
CHD1-211ENST00000514344 ABCA6Q8N139 1617 aa5.65□□□□□ -1.51
CHD1-211ENST00000514344 CEP170BQ9Y4F5 1589 aaPredicted RBP5.65□□□□□ -1.51
CHD1-211ENST00000514344 MYO3AQ8NEV4 1616 aa5.65□□□□□ -1.51
CHD1-211ENST00000514344 NPATQ14207 1427 aa5.64□□□□□ -1.51
CHD1-211ENST00000514344 UPF1Q92900 1129 aaKnown RBP eCLIP5.64□□□□□ -1.51
CHD1-211ENST00000514344 CNTLNQ9NXG0 1405 aa5.64□□□□□ -1.51
CHD1-211ENST00000514344 ATP1B4Q9UN42 357 aaPredicted RBP5.64□□□□□ -1.51
CHD1-211ENST00000514344 AGLP35573 1532 aa5.63□□□□□ -1.51
CHD1-211ENST00000514344 CDK13Q14004 1512 aaKnown RBP5.63□□□□□ -1.51
CHD1-211ENST00000514344 TRIM52Q96A61 297 aa5.63□□□□□ -1.51
CHD1-211ENST00000514344 KDM5CP41229 1560 aa5.63□□□□□ -1.51
CHD1-211ENST00000514344 ZNF142P52746 1687 aaPredicted RBP5.62□□□□□ -1.51
CHD1-211ENST00000514344 ARHGAP5Q13017 1502 aa5.62□□□□□ -1.51
CHD1-211ENST00000514344 SAMD9Q5K651 1589 aa5.62□□□□□ -1.51
CHD1-211ENST00000514344 MYO5CQ9NQX4 1742 aa5.62□□□□□ -1.51
CHD1-211ENST00000514344 GGT6Q6P531 493 aa5.61□□□□□ -1.51
CHD1-211ENST00000514344 EP400Q96L91 3159 aa5.61□□□□□ -1.51
CHD1-211ENST00000514344 REREQ9P2R6 1566 aa5.61□□□□□ -1.51
CHD1-211ENST00000514344 CLTCQ00610 1675 aaKnown RBP5.61□□□□□ -1.51
CHD1-211ENST00000514344 NEURL4Q96JN8 1562 aa5.61□□□□□ -1.51
CHD1-211ENST00000514344 PRXQ9BXM0 1461 aa5.61□□□□□ -1.51
CHD1-211ENST00000514344 POLR1AO95602 1720 aaPredicted RBP5.6□□□□□ -1.51
CHD1-211ENST00000514344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.6□□□□□ -1.51
CHD1-211ENST00000514344 MROH2AA6NES4 1674 aa5.6□□□□□ -1.51
CHD1-211ENST00000514344 DNMT1P26358 1616 aaKnown RBP5.6□□□□□ -1.51
CHD1-211ENST00000514344 MLH3Q9UHC1 1453 aa5.6□□□□□ -1.51
CHD1-211ENST00000514344 VWDEQ8N2E2 1590 aa5.6□□□□□ -1.51
CHD1-211ENST00000514344 ANKLE2Q86XL3 938 aa5.59□□□□□ -1.51
CHD1-211ENST00000514344 KIF14Q15058 1648 aa5.59□□□□□ -1.51
CHD1-211ENST00000514344 LRRC7Q96NW7 1537 aa5.59□□□□□ -1.51
CHD1-211ENST00000514344 RNF17Q9BXT8 1623 aaKnown RBP5.59□□□□□ -1.52
CHD1-211ENST00000514344 KIDINS220Q9ULH0 1771 aa5.58□□□□□ -1.52
CHD1-211ENST00000514344 A2ML1A8K2U0 1454 aa5.58□□□□□ -1.52
CHD1-211ENST00000514344 STRCP1A6NGW2 1772 aa5.58□□□□□ -1.52
CHD1-211ENST00000514344 FBXO31Q5XUX0 539 aaPredicted RBP5.58□□□□□ -1.52
CHD1-211ENST00000514344 NPHP4O75161 1426 aaPredicted RBP5.57□□□□□ -1.52
CHD1-211ENST00000514344 ZNF777Q9ULD5 760 aaPredicted RBP5.57□□□□□ -1.52
CHD1-211ENST00000514344 ITSN2Q9NZM3 1697 aa5.57□□□□□ -1.52
CHD1-211ENST00000514344 ABCC1P33527 1531 aa5.56□□□□□ -1.52
CHD1-211ENST00000514344 RBM33Q96EV2 1170 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms