RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-215ENST00000512098 CEBPAP49715 358 aaPredicted RBP22.4■■□□□ 1.18
SSBP2-215ENST00000512098 HECW1Q76N89 1606 aa22.37■■□□□ 1.17
SSBP2-215ENST00000512098 MED1Q15648 1581 aaPredicted RBP22.34■■□□□ 1.17
SSBP2-215ENST00000512098 ATP10AO60312 1499 aa22.33■■□□□ 1.16
SSBP2-215ENST00000512098 UBAP1LF5GYI3 381 aa22.32■■□□□ 1.16
SSBP2-215ENST00000512098 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
SSBP2-215ENST00000512098 RAPGEF6Q8TEU7 1601 aa22.31■■□□□ 1.16
SSBP2-215ENST00000512098 NCOA1Q15788 1441 aa22.3■■□□□ 1.16
SSBP2-215ENST00000512098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
SSBP2-215ENST00000512098 HNRNPUL2Q1KMD3 747 aaKnown RBP22.27■■□□□ 1.16
SSBP2-215ENST00000512098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.26■■□□□ 1.15
SSBP2-215ENST00000512098 C3P01024 1663 aa22.24■■□□□ 1.15
SSBP2-215ENST00000512098 NUP153P49790 1475 aaKnown RBP22.23■■□□□ 1.15
SSBP2-215ENST00000512098 P3H3Q8IVL6 736 aa22.21■■□□□ 1.15
SSBP2-215ENST00000512098 SCAPERQ9BY12 1400 aa22.21■■□□□ 1.15
SSBP2-215ENST00000512098 PLEKHD1A6NEE1 506 aa22.2■■□□□ 1.14
SSBP2-215ENST00000512098 TRAPPC8Q9Y2L5 1435 aa22.2■■□□□ 1.14
SSBP2-215ENST00000512098 SAMD9Q5K651 1589 aa22.19■■□□□ 1.14
SSBP2-215ENST00000512098 ZNF335Q9H4Z2 1342 aaPredicted RBP22.17■■□□□ 1.14
SSBP2-215ENST00000512098 HSPA1LP34931 641 aa22.16■■□□□ 1.14
SSBP2-215ENST00000512098 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
SSBP2-215ENST00000512098 CAMSAP1Q5T5Y3 1602 aa22.14■■□□□ 1.14
SSBP2-215ENST00000512098 REREQ9P2R6 1566 aa22.12■■□□□ 1.13
SSBP2-215ENST00000512098 PLCH2O75038 1416 aa22.12■■□□□ 1.13
SSBP2-215ENST00000512098 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
SSBP2-215ENST00000512098 AGLP35573 1532 aa22.07■■□□□ 1.12
SSBP2-215ENST00000512098 ZNF518AQ6AHZ1 1483 aa22.06■■□□□ 1.12
SSBP2-215ENST00000512098 KDM5CP41229 1560 aa22.06■■□□□ 1.12
SSBP2-215ENST00000512098 NCKAP5LQ9HCH0 1330 aa22.05■■□□□ 1.12
SSBP2-215ENST00000512098 DIP2CQ9Y2E4 1556 aa22.04■■□□□ 1.12
SSBP2-215ENST00000512098 NPATQ14207 1427 aa22.04■■□□□ 1.12
SSBP2-215ENST00000512098 PLA2R1Q13018 1463 aa22.03■■□□□ 1.12
SSBP2-215ENST00000512098 PKD2Q13563 968 aa22.03■■□□□ 1.12
SSBP2-215ENST00000512098 ESF1Q9H501 851 aaKnown RBP22.03■■□□□ 1.12
SSBP2-215ENST00000512098 CNTLNQ9NXG0 1405 aa22.03■■□□□ 1.12
SSBP2-215ENST00000512098 TOM1O60784 492 aa22.02■■□□□ 1.12
SSBP2-215ENST00000512098 EFCAB2Q5VUJ9 269 aa22■■□□□ 1.11
SSBP2-215ENST00000512098 TCOF1Q13428 1488 aaKnown RBP22■■□□□ 1.11
SSBP2-215ENST00000512098 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
SSBP2-215ENST00000512098 PIP4K2BP78356 416 aa21.99■■□□□ 1.11
SSBP2-215ENST00000512098 MYO5CQ9NQX4 1742 aa21.97■■□□□ 1.11
SSBP2-215ENST00000512098 MROH2AA6NES4 1674 aa21.97■■□□□ 1.11
SSBP2-215ENST00000512098 ZNF142P52746 1687 aaPredicted RBP21.97■■□□□ 1.11
SSBP2-215ENST00000512098 ABCA6Q8N139 1617 aa21.96■■□□□ 1.11
SSBP2-215ENST00000512098 AFAP1Q8N556 730 aa21.95■■□□□ 1.1
SSBP2-215ENST00000512098 MLH3Q9UHC1 1453 aa21.94■■□□□ 1.1
SSBP2-215ENST00000512098 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
SSBP2-215ENST00000512098 CPS1P31327 1500 aa21.93■■□□□ 1.1
SSBP2-215ENST00000512098 PPP6R1Q9UPN7 881 aa21.93■■□□□ 1.1
SSBP2-215ENST00000512098 MYO3AQ8NEV4 1616 aa21.88■■□□□ 1.09
SSBP2-215ENST00000512098 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
SSBP2-215ENST00000512098 CEP170BQ9Y4F5 1589 aaPredicted RBP21.87■■□□□ 1.09
SSBP2-215ENST00000512098 RGS17Q9UGC6 210 aaPredicted RBP21.87■■□□□ 1.09
SSBP2-215ENST00000512098 MYT1LQ9UL68 1186 aa21.87■■□□□ 1.09
SSBP2-215ENST00000512098 PTPRKQ15262 1439 aa21.87■■□□□ 1.09
SSBP2-215ENST00000512098 ALKQ9UM73 1620 aa21.86■■□□□ 1.09
SSBP2-215ENST00000512098 CDK13Q14004 1512 aaKnown RBP21.85■■□□□ 1.09
SSBP2-215ENST00000512098 SHANK2Q9UPX8 1470 aa21.83■■□□□ 1.08
SSBP2-215ENST00000512098 ARHGAP5Q13017 1502 aa21.8■■□□□ 1.08
SSBP2-215ENST00000512098 KIDINS220Q9ULH0 1771 aa21.79■■□□□ 1.08
SSBP2-215ENST00000512098 POLR1AO95602 1720 aaPredicted RBP21.76■■□□□ 1.07
SSBP2-215ENST00000512098 KIF14Q15058 1648 aa21.76■■□□□ 1.07
SSBP2-215ENST00000512098 NEURL4Q96JN8 1562 aa21.74■■□□□ 1.07
SSBP2-215ENST00000512098 CLTCQ00610 1675 aaKnown RBP21.73■■□□□ 1.07
SSBP2-215ENST00000512098 CDC42BPBQ9Y5S2 1711 aa21.73■■□□□ 1.07
SSBP2-215ENST00000512098 DNMT1P26358 1616 aaKnown RBP21.73■■□□□ 1.07
SSBP2-215ENST00000512098 A2ML1A8K2U0 1454 aa21.71■■□□□ 1.07
SSBP2-215ENST00000512098 ABCC1P33527 1531 aa21.71■■□□□ 1.07
SSBP2-215ENST00000512098 VWDEQ8N2E2 1590 aa21.71■■□□□ 1.07
SSBP2-215ENST00000512098 ITSN2Q9NZM3 1697 aa21.71■■□□□ 1.07
SSBP2-215ENST00000512098 CDK11AQ9UQ88 783 aaPredicted RBP21.7■■□□□ 1.06
SSBP2-215ENST00000512098 SRCAPQ6ZRS2 3230 aa21.67■■□□□ 1.06
SSBP2-215ENST00000512098 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
SSBP2-215ENST00000512098 POTEAQ6S8J7 498 aa21.67■■□□□ 1.06
SSBP2-215ENST00000512098 TROQ12816 1431 aaPredicted RBP21.66■■□□□ 1.06
SSBP2-215ENST00000512098 RNF17Q9BXT8 1623 aaKnown RBP21.63■■□□□ 1.05
SSBP2-215ENST00000512098 CSRNP3Q8WYN3 585 aa21.63■■□□□ 1.05
SSBP2-215ENST00000512098 PREX2Q70Z35 1606 aa21.62■■□□□ 1.05
SSBP2-215ENST00000512098 CLIP1P30622 1438 aa21.61■■□□□ 1.05
SSBP2-215ENST00000512098 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
SSBP2-215ENST00000512098 PLXNC1O60486 1568 aa21.6■■□□□ 1.05
SSBP2-215ENST00000512098 SAMD9LQ8IVG5 1584 aa21.6■■□□□ 1.05
SSBP2-215ENST00000512098 MED14O60244 1454 aa21.58■■□□□ 1.05
SSBP2-215ENST00000512098 SETD1AO15047 1707 aaKnown RBP21.58■■□□□ 1.05
SSBP2-215ENST00000512098 LRRC7Q96NW7 1537 aa21.58■■□□□ 1.04
SSBP2-215ENST00000512098 SYNMO15061 1565 aa21.57■■□□□ 1.04
SSBP2-215ENST00000512098 STRCP1A6NGW2 1772 aa21.56■■□□□ 1.04
SSBP2-215ENST00000512098 ANKLE2Q86XL3 938 aa21.56■■□□□ 1.04
SSBP2-215ENST00000512098 DEPDC5O75140 1603 aa21.55■■□□□ 1.04
SSBP2-215ENST00000512098 FMN1Q68DA7 1419 aa21.54■■□□□ 1.04
SSBP2-215ENST00000512098 NPHP4O75161 1426 aaPredicted RBP21.53■■□□□ 1.04
SSBP2-215ENST00000512098 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
SSBP2-215ENST00000512098 A2MP01023 1474 aa21.51■■□□□ 1.03
SSBP2-215ENST00000512098 GGT6Q6P531 493 aa21.5■■□□□ 1.03
SSBP2-215ENST00000512098 SPAG9O60271 1321 aaKnown RBP21.5■■□□□ 1.03
SSBP2-215ENST00000512098 IQGAP1P46940 1657 aa21.5■■□□□ 1.03
SSBP2-215ENST00000512098 ATP7AQ04656 1500 aa21.49■■□□□ 1.03
SSBP2-215ENST00000512098 TNRQ92752 1358 aa21.48■■□□□ 1.03
SSBP2-215ENST00000512098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.037e-7■■■■□ 22.1
SSBP2-215ENST00000512098 CDC42BPAQ5VT25 1732 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms