RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-215ENST00000512098 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
SSBP2-215ENST00000512098 ABCC9O60706 1549 aa31.54■■■□□ 2.64
SSBP2-215ENST00000512098 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
SSBP2-215ENST00000512098 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
SSBP2-215ENST00000512098 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
SSBP2-215ENST00000512098 NACADO15069 1562 aa29.15■■■□□ 2.26
SSBP2-215ENST00000512098 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
SSBP2-215ENST00000512098 DNAJC5Q9H3Z4 198 aa29.05■■■□□ 2.24
SSBP2-215ENST00000512098 UNC13AQ9UPW8 1703 aa28.96■■■□□ 2.23
SSBP2-215ENST00000512098 BICRAQ9NZM4 1560 aa28.8■■■□□ 2.2
SSBP2-215ENST00000512098 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
SSBP2-215ENST00000512098 DCAF8L2P0C7V8 631 aa28.55■■■□□ 2.16
SSBP2-215ENST00000512098 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
SSBP2-215ENST00000512098 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
SSBP2-215ENST00000512098 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
SSBP2-215ENST00000512098 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
SSBP2-215ENST00000512098 CUX2O14529 1486 aa27.77■■■□□ 2.04
SSBP2-215ENST00000512098 SCRIBQ14160 1630 aa27.64■■■□□ 2.02
SSBP2-215ENST00000512098 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
SSBP2-215ENST00000512098 ZCCHC6Q5VYS8 1495 aaKnown RBP27.47■■□□□ 1.99
SSBP2-215ENST00000512098 ERCC6Q03468 1493 aa27.33■■□□□ 1.97
SSBP2-215ENST00000512098 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
SSBP2-215ENST00000512098 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
SSBP2-215ENST00000512098 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
SSBP2-215ENST00000512098 NESP48681 1621 aa26.78■■□□□ 1.88
SSBP2-215ENST00000512098 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
SSBP2-215ENST00000512098 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
SSBP2-215ENST00000512098 SMARCA2P51531 1590 aa26.53■■□□□ 1.84
SSBP2-215ENST00000512098 LAMC3Q9Y6N6 1575 aa26.5■■□□□ 1.83
SSBP2-215ENST00000512098 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
SSBP2-215ENST00000512098 PDS5BQ9NTI5 1447 aa26.36■■□□□ 1.81
SSBP2-215ENST00000512098 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
SSBP2-215ENST00000512098 BAZ1AQ9NRL2 1556 aaPredicted RBP26.32■■□□□ 1.8
SSBP2-215ENST00000512098 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
SSBP2-215ENST00000512098 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
SSBP2-215ENST00000512098 WDR62O43379 1518 aa26.19■■□□□ 1.78
SSBP2-215ENST00000512098 MRC2Q9UBG0 1479 aa26.18■■□□□ 1.78
SSBP2-215ENST00000512098 PEG3Q9GZU2 1588 aa26.15■■□□□ 1.78
SSBP2-215ENST00000512098 RIMBP3CA6NJZ7 1639 aa26.05■■□□□ 1.76
SSBP2-215ENST00000512098 RIMBP3BA6NNM3 1639 aa26.05■■□□□ 1.76
SSBP2-215ENST00000512098 RIMBP3Q9UFD9 1639 aa26.05■■□□□ 1.76
SSBP2-215ENST00000512098 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
SSBP2-215ENST00000512098 ARHGEF11O15085 1522 aa25.85■■□□□ 1.73
SSBP2-215ENST00000512098 AEBP2Q6ZN18 517 aaPredicted RBP25.85■■□□□ 1.73
SSBP2-215ENST00000512098 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
SSBP2-215ENST00000512098 TRHP20396 242 aaPredicted RBP25.72■■□□□ 1.71
SSBP2-215ENST00000512098 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
SSBP2-215ENST00000512098 FANCD2Q9BXW9 1451 aa25.7■■□□□ 1.7
SSBP2-215ENST00000512098 CYB5RLQ6IPT4 315 aa25.67■■□□□ 1.7
SSBP2-215ENST00000512098 URB2Q14146 1524 aaKnown RBP25.57■■□□□ 1.68
SSBP2-215ENST00000512098 ARAP1Q96P48 1450 aa25.51■■□□□ 1.67
SSBP2-215ENST00000512098 CFTRP13569 1480 aa25.5■■□□□ 1.67
SSBP2-215ENST00000512098 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
SSBP2-215ENST00000512098 IFT140Q96RY7 1462 aa25.39■■□□□ 1.65
SSBP2-215ENST00000512098 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
SSBP2-215ENST00000512098 WIZO95785 1651 aa25.34■■□□□ 1.65
SSBP2-215ENST00000512098 CHD1O14646 1710 aa25.28■■□□□ 1.64
SSBP2-215ENST00000512098 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
SSBP2-215ENST00000512098 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
SSBP2-215ENST00000512098 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
SSBP2-215ENST00000512098 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.6
SSBP2-215ENST00000512098 FBLN2P98095 1184 aa25.03■■□□□ 1.6
SSBP2-215ENST00000512098 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
SSBP2-215ENST00000512098 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
SSBP2-215ENST00000512098 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
SSBP2-215ENST00000512098 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
SSBP2-215ENST00000512098 ILDR1Q86SU0 546 aaPredicted RBP24.95■■□□□ 1.58
SSBP2-215ENST00000512098 DNMBPQ6XZF7 1577 aa24.92■■□□□ 1.58
SSBP2-215ENST00000512098 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
SSBP2-215ENST00000512098 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
SSBP2-215ENST00000512098 POLA1P09884 1462 aaPredicted RBP24.77■■□□□ 1.56
SSBP2-215ENST00000512098 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
SSBP2-215ENST00000512098 CHMP7Q8WUX9 453 aaPredicted RBP24.72■■□□□ 1.55
SSBP2-215ENST00000512098 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
SSBP2-215ENST00000512098 MAGI1Q96QZ7 1491 aaPredicted RBP24.7■■□□□ 1.54
SSBP2-215ENST00000512098 TDRD9Q8NDG6 1382 aaKnown RBP24.68■■□□□ 1.54
SSBP2-215ENST00000512098 CCDC88BA6NC98 1476 aa24.68■■□□□ 1.54
SSBP2-215ENST00000512098 RAD54L2Q9Y4B4 1467 aa24.65■■□□□ 1.54
SSBP2-215ENST00000512098 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
SSBP2-215ENST00000512098 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
SSBP2-215ENST00000512098 SOGA1O94964 1423 aa24.61■■□□□ 1.53
SSBP2-215ENST00000512098 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
SSBP2-215ENST00000512098 KDM4FA0A1W2PPD8 638 aa24.53■■□□□ 1.52
SSBP2-215ENST00000512098 ERCC6L2Q5T890 1561 aa24.46■■□□□ 1.51
SSBP2-215ENST00000512098 FGD5Q6ZNL6 1462 aa24.42■■□□□ 1.5
SSBP2-215ENST00000512098 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
SSBP2-215ENST00000512098 CEP170Q5SW79 1584 aa24.33■■□□□ 1.49
SSBP2-215ENST00000512098 ABCC10Q5T3U5 1492 aa24.3■■□□□ 1.48
SSBP2-215ENST00000512098 SHROOM2Q13796 1616 aa24.27■■□□□ 1.48
SSBP2-215ENST00000512098 KDM6BO15054 1643 aa24.26■■□□□ 1.47
SSBP2-215ENST00000512098 FAM69CQ0P6D2 419 aa24.26■■□□□ 1.47
SSBP2-215ENST00000512098 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
SSBP2-215ENST00000512098 NUP160Q12769 1436 aa24.23■■□□□ 1.47
SSBP2-215ENST00000512098 CUX1P39880 1505 aa24.23■■□□□ 1.47
SSBP2-215ENST00000512098 ABCA5Q8WWZ7 1642 aa24.19■■□□□ 1.46
SSBP2-215ENST00000512098 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
SSBP2-215ENST00000512098 MAPKBP1O60336 1514 aa24.18■■□□□ 1.46
SSBP2-215ENST00000512098 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
SSBP2-215ENST00000512098 HECW2Q9P2P5 1572 aa24.1■■□□□ 1.45
SSBP2-215ENST00000512098 ADAMTS12P58397 1594 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms