RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 ARAP3Q8WWN8 1544 aa12.18□□□□□ -0.46
HMGCR-211ENST00000512053 ZBTB12Q9Y330 459 aaPredicted RBP12.18□□□□□ -0.46
HMGCR-211ENST00000512053 ATP10BO94823 1461 aa12.17□□□□□ -0.46
HMGCR-211ENST00000512053 RAPGEF3O95398 923 aa12.17□□□□□ -0.46
HMGCR-211ENST00000512053 RANGAP1P46060 587 aaPredicted RBP12.16□□□□□ -0.46
HMGCR-211ENST00000512053 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
HMGCR-211ENST00000512053 FBXO41Q8TF61 875 aa12.15□□□□□ -0.46
HMGCR-211ENST00000512053 PLEKHD1A6NEE1 506 aa12.14□□□□□ -0.47
HMGCR-211ENST00000512053 KIF21BO75037 1637 aa12.12□□□□□ -0.47
HMGCR-211ENST00000512053 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
HMGCR-211ENST00000512053 NEO1Q92859 1461 aa12.12□□□□□ -0.47
HMGCR-211ENST00000512053 PTPRMP28827 1452 aa12.11□□□□□ -0.47
HMGCR-211ENST00000512053 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
HMGCR-211ENST00000512053 ABCA9Q8IUA7 1624 aa12.09□□□□□ -0.47
HMGCR-211ENST00000512053 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
HMGCR-211ENST00000512053 RAPGEF6Q8TEU7 1601 aa12.07□□□□□ -0.48
HMGCR-211ENST00000512053 DENND4BO75064 1496 aaPredicted RBP12.06□□□□□ -0.48
HMGCR-211ENST00000512053 POGZQ7Z3K3 1410 aa12.05□□□□□ -0.48
HMGCR-211ENST00000512053 AKNAQ7Z591 1439 aa12.04□□□□□ -0.48
HMGCR-211ENST00000512053 NUP153P49790 1475 aaKnown RBP12.04□□□□□ -0.48
HMGCR-211ENST00000512053 SAMD9Q5K651 1589 aa12.04□□□□□ -0.48
HMGCR-211ENST00000512053 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
HMGCR-211ENST00000512053 EEA1Q15075 1411 aa12.03□□□□□ -0.48
HMGCR-211ENST00000512053 FHOD3Q2V2M9 1422 aa12.03□□□□□ -0.48
HMGCR-211ENST00000512053 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
HMGCR-211ENST00000512053 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
HMGCR-211ENST00000512053 FANCAO15360 1455 aa12.02□□□□□ -0.48
HMGCR-211ENST00000512053 HAX1O00165 279 aa12.01□□□□□ -0.49
HMGCR-211ENST00000512053 MLECQ14165 292 aa12.01□□□□□ -0.49
HMGCR-211ENST00000512053 PCF11O94913 1555 aaKnown RBP12.01□□□□□ -0.49
HMGCR-211ENST00000512053 BCORL1Q5H9F3 1711 aa12□□□□□ -0.49
HMGCR-211ENST00000512053 HSPA2P54652 639 aa11.99□□□□□ -0.49
HMGCR-211ENST00000512053 CDK11AQ9UQ88 783 aaPredicted RBP11.99□□□□□ -0.49
HMGCR-211ENST00000512053 MADDQ8WXG6 1647 aa11.98□□□□□ -0.49
HMGCR-211ENST00000512053 FRMPD1Q5SYB0 1578 aa11.98□□□□□ -0.49
HMGCR-211ENST00000512053 LMTK3Q96Q04 1460 aa11.98□□□□□ -0.49
HMGCR-211ENST00000512053 MYT1LQ9UL68 1186 aa11.98□□□□□ -0.49
HMGCR-211ENST00000512053 CFAP74Q9C0B2 1584 aa11.97□□□□□ -0.49
HMGCR-211ENST00000512053 MAGI2Q86UL8 1455 aa11.97□□□□□ -0.49
HMGCR-211ENST00000512053 UBTFP17480 764 aaKnown RBP11.97□□□□□ -0.49
HMGCR-211ENST00000512053 EFCAB2Q5VUJ9 269 aa11.97□□□□□ -0.49
HMGCR-211ENST00000512053 ARHGEF40Q8TER5 1519 aa11.96□□□□□ -0.49
HMGCR-211ENST00000512053 SCAPERQ9BY12 1400 aa11.96□□□□□ -0.49
HMGCR-211ENST00000512053 EVX2Q03828 476 aa11.96□□□□□ -0.49
HMGCR-211ENST00000512053 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.5
HMGCR-211ENST00000512053 ZFYVE16Q7Z3T8 1539 aa11.96□□□□□ -0.5
HMGCR-211ENST00000512053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.5
HMGCR-211ENST00000512053 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
HMGCR-211ENST00000512053 PLCH2O75038 1416 aa11.94□□□□□ -0.5
HMGCR-211ENST00000512053 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
HMGCR-211ENST00000512053 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
HMGCR-211ENST00000512053 RIMS1Q86UR5 1692 aaKnown RBP11.94□□□□□ -0.5
HMGCR-211ENST00000512053 ATP10AO60312 1499 aa11.92□□□□□ -0.5
HMGCR-211ENST00000512053 ESF1Q9H501 851 aaKnown RBP11.92□□□□□ -0.5
HMGCR-211ENST00000512053 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
HMGCR-211ENST00000512053 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
HMGCR-211ENST00000512053 ZBTB22O15209 634 aa11.9□□□□□ -0.5
HMGCR-211ENST00000512053 TTC37Q6PGP7 1564 aa11.9□□□□□ -0.5
HMGCR-211ENST00000512053 RICTORQ6R327 1708 aa11.9□□□□□ -0.5
HMGCR-211ENST00000512053 CDK13Q14004 1512 aaKnown RBP11.9□□□□□ -0.5
HMGCR-211ENST00000512053 HECW1Q76N89 1606 aa11.89□□□□□ -0.51
HMGCR-211ENST00000512053 C9orf84Q5VXU9 1444 aa11.89□□□□□ -0.51
HMGCR-211ENST00000512053 CEBPAP49715 358 aaPredicted RBP11.89□□□□□ -0.51
HMGCR-211ENST00000512053 CLIP1P30622 1438 aa11.88□□□□□ -0.51
HMGCR-211ENST00000512053 AFAP1Q8N556 730 aa11.87□□□□□ -0.51
HMGCR-211ENST00000512053 ZNF518AQ6AHZ1 1483 aa11.86□□□□□ -0.51
HMGCR-211ENST00000512053 UHRF1BP1Q6BDS2 1440 aa11.85□□□□□ -0.51
HMGCR-211ENST00000512053 ARHGAP5Q13017 1502 aa11.84□□□□□ -0.51
HMGCR-211ENST00000512053 ARHGEF12Q9NZN5 1544 aa11.83□□□□□ -0.52
HMGCR-211ENST00000512053 TROQ12816 1431 aaPredicted RBP11.83□□□□□ -0.52
HMGCR-211ENST00000512053 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
HMGCR-211ENST00000512053 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
HMGCR-211ENST00000512053 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
HMGCR-211ENST00000512053 KIF14Q15058 1648 aa11.82□□□□□ -0.52
HMGCR-211ENST00000512053 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
HMGCR-211ENST00000512053 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
HMGCR-211ENST00000512053 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
HMGCR-211ENST00000512053 ATXN8OSP0DMR3 200 aa11.79□□□□□ -0.52
HMGCR-211ENST00000512053 SIGLEC1Q9BZZ2 1709 aa11.79□□□□□ -0.52
HMGCR-211ENST00000512053 MYO5CQ9NQX4 1742 aa11.79□□□□□ -0.52
HMGCR-211ENST00000512053 ZNF777Q9ULD5 760 aaPredicted RBP11.78□□□□□ -0.52
HMGCR-211ENST00000512053 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
HMGCR-211ENST00000512053 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
HMGCR-211ENST00000512053 TRAPPC8Q9Y2L5 1435 aa11.76□□□□□ -0.53
HMGCR-211ENST00000512053 KDM5CP41229 1560 aa11.75□□□□□ -0.53
HMGCR-211ENST00000512053 PTPRTO14522 1441 aa11.75□□□□□ -0.53
HMGCR-211ENST00000512053 CNTLNQ9NXG0 1405 aa11.75□□□□□ -0.53
HMGCR-211ENST00000512053 CCDC18Q5T9S5 1454 aa11.75□□□□□ -0.53
HMGCR-211ENST00000512053 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
HMGCR-211ENST00000512053 AGLP35573 1532 aa11.73□□□□□ -0.53
HMGCR-211ENST00000512053 DIP2CQ9Y2E4 1556 aa11.73□□□□□ -0.53
HMGCR-211ENST00000512053 REREQ9P2R6 1566 aa11.72□□□□□ -0.53
HMGCR-211ENST00000512053 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
HMGCR-211ENST00000512053 SPAG9O60271 1321 aaKnown RBP11.72□□□□□ -0.53
HMGCR-211ENST00000512053 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
HMGCR-211ENST00000512053 SOCS7O14512 581 aa11.71□□□□□ -0.53
HMGCR-211ENST00000512053 HNRNPMP52272 730 aaKnown RBP eCLIP11.71□□□□□ -0.53
HMGCR-211ENST00000512053 ZMYM3Q14202 1370 aa11.7□□□□□ -0.54
HMGCR-211ENST00000512053 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
HMGCR-211ENST00000512053 CFDP1Q9UEE9 299 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms