RNA–Protein interactions for RNA: ENST00000510058.1

CCND3-212, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-212ENST00000510058 CDC42BPBQ9Y5S2 1711 aa30.37■■■□□ 2.45
CCND3-212ENST00000510058 GPATCH8Q9UKJ3 1502 aaKnown RBP30.35■■■□□ 2.45
CCND3-212ENST00000510058 ARHGAP5Q13017 1502 aa30.34■■■□□ 2.45
CCND3-212ENST00000510058 FANCAO15360 1455 aa30.34■■■□□ 2.45
CCND3-212ENST00000510058 EFCAB2Q5VUJ9 269 aa30.29■■■□□ 2.44
CCND3-212ENST00000510058 MYOM3Q5VTT5 1437 aa30.24■■■□□ 2.43
CCND3-212ENST00000510058 AKNAQ7Z591 1439 aa30.24■■■□□ 2.43
CCND3-212ENST00000510058 KDM6BO15054 1643 aa30.23■■■□□ 2.43
CCND3-212ENST00000510058 CFDP1Q9UEE9 299 aaPredicted RBP30.23■■■□□ 2.43
CCND3-212ENST00000510058 MIA2Q96PC5 1412 aa30.22■■■□□ 2.43
CCND3-212ENST00000510058 ADGRL1O94910 1474 aa30.19■■■□□ 2.42
CCND3-212ENST00000510058 PLEKHH2Q8IVE3 1493 aa30.19■■■□□ 2.42
CCND3-212ENST00000510058 SAMD9LQ8IVG5 1584 aa30.17■■■□□ 2.42
CCND3-212ENST00000510058 ABCC1P33527 1531 aa30.17■■■□□ 2.42
CCND3-212ENST00000510058 KIAA1107Q9UPP5 1409 aa30.13■■■□□ 2.41
CCND3-212ENST00000510058 DENND4BO75064 1496 aaPredicted RBP30.12■■■□□ 2.41
CCND3-212ENST00000510058 SCAPERQ9BY12 1400 aa30.11■■■□□ 2.41
CCND3-212ENST00000510058 ZNF777Q9ULD5 760 aaPredicted RBP30.1■■■□□ 2.41
CCND3-212ENST00000510058 FGD6Q6ZV73 1430 aa30.1■■■□□ 2.41
CCND3-212ENST00000510058 CAMSAP2Q08AD1 1489 aa30.1■■■□□ 2.41
CCND3-212ENST00000510058 RICTORQ6R327 1708 aa30.09■■■□□ 2.41
CCND3-212ENST00000510058 COL17A1Q9UMD9 1497 aaPredicted RBP30.08■■■□□ 2.41
CCND3-212ENST00000510058 PTPN23Q9H3S7 1636 aa30.07■■■□□ 2.4
CCND3-212ENST00000510058 SYCP2Q9BX26 1530 aa30.06■■■□□ 2.4
CCND3-212ENST00000510058 ZNF518AQ6AHZ1 1483 aa30.06■■■□□ 2.4
CCND3-212ENST00000510058 POGZQ7Z3K3 1410 aa30.06■■■□□ 2.4
CCND3-212ENST00000510058 PPARGC1BQ86YN6 1023 aaKnown RBP30.06■■■□□ 2.4
CCND3-212ENST00000510058 TCOF1Q13428 1488 aaKnown RBP30.05■■■□□ 2.4
CCND3-212ENST00000510058 FRMPD1Q5SYB0 1578 aa30.03■■■□□ 2.4
CCND3-212ENST00000510058 ARHGEF12Q9NZN5 1544 aa30.01■■■□□ 2.4
CCND3-212ENST00000510058 RSPH4AQ5TD94 716 aa30.01■■■□□ 2.39
CCND3-212ENST00000510058 KDM5CP41229 1560 aa30.01■■■□□ 2.39
CCND3-212ENST00000510058 ARHGEF5Q12774 1597 aa30.01■■■□□ 2.39
CCND3-212ENST00000510058 ZMYM4Q5VZL5 1548 aa30.01■■■□□ 2.39
CCND3-212ENST00000510058 ZNF644Q9H582 1327 aaPredicted RBP29.98■■■□□ 2.39
CCND3-212ENST00000510058 MBD5Q9P267 1494 aa29.98■■■□□ 2.39
CCND3-212ENST00000510058 MAGI2Q86UL8 1455 aa29.96■■■□□ 2.39
CCND3-212ENST00000510058 RAPGEF3O95398 923 aa29.96■■■□□ 2.39
CCND3-212ENST00000510058 TRAPPC8Q9Y2L5 1435 aa29.96■■■□□ 2.39
CCND3-212ENST00000510058 CCDC141Q6ZP82 1450 aa29.95■■■□□ 2.39
CCND3-212ENST00000510058 HNRNPMP52272 730 aaKnown RBP eCLIP29.94■■■□□ 2.38
CCND3-212ENST00000510058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.93■■■□□ 2.383e-7■□□□□ 10.7
CCND3-212ENST00000510058 RRBP1Q9P2E9 1410 aaKnown RBP29.93■■■□□ 2.38
CCND3-212ENST00000510058 HECW2Q9P2P5 1572 aa29.93■■■□□ 2.38
CCND3-212ENST00000510058 DNMT1P26358 1616 aaKnown RBP29.9■■■□□ 2.38
CCND3-212ENST00000510058 MLH3Q9UHC1 1453 aa29.9■■■□□ 2.38
CCND3-212ENST00000510058 AFAP1Q8N556 730 aa29.89■■■□□ 2.38
CCND3-212ENST00000510058 CROCC2H7BZ55 1655 aa29.88■■■□□ 2.37
CCND3-212ENST00000510058 ZFYVE16Q7Z3T8 1539 aa29.86■■■□□ 2.37
CCND3-212ENST00000510058 INO80Q9ULG1 1556 aaPredicted RBP29.86■■■□□ 2.37
CCND3-212ENST00000510058 RTEL1-TNFRSF6BF6WH68 1400 aa29.85■■■□□ 2.37
CCND3-212ENST00000510058 SHANK2Q9UPX8 1470 aa29.85■■■□□ 2.37
CCND3-212ENST00000510058 ARHGEF40Q8TER5 1519 aa29.85■■■□□ 2.37
CCND3-212ENST00000510058 MAST1Q9Y2H9 1570 aa29.85■■■□□ 2.37
CCND3-212ENST00000510058 FAM50AQ14320 339 aaKnown RBP29.84■■■□□ 2.37
CCND3-212ENST00000510058 ATP7AQ04656 1500 aa29.83■■■□□ 2.37
CCND3-212ENST00000510058 SPAG9O60271 1321 aaKnown RBP29.83■■■□□ 2.37
CCND3-212ENST00000510058 KIDINS220Q9ULH0 1771 aa29.82■■■□□ 2.36
CCND3-212ENST00000510058 DAPK1P53355 1430 aa29.82■■■□□ 2.36
CCND3-212ENST00000510058 TSPY4P0CV99 314 aa29.82■■■□□ 2.36
CCND3-212ENST00000510058 TSPY10P0CW01 314 aa29.82■■■□□ 2.36
CCND3-212ENST00000510058 ABCC5O15440 1437 aa29.79■■■□□ 2.36
CCND3-212ENST00000510058 MYT1LQ9UL68 1186 aa29.77■■■□□ 2.36
CCND3-212ENST00000510058 C9orf84Q5VXU9 1444 aa29.77■■■□□ 2.36
CCND3-212ENST00000510058 DIP2CQ9Y2E4 1556 aa29.76■■■□□ 2.35
CCND3-212ENST00000510058 ABCA6Q8N139 1617 aa29.75■■■□□ 2.35
CCND3-212ENST00000510058 YEATS2Q9ULM3 1422 aa29.74■■■□□ 2.35
CCND3-212ENST00000510058 PLXNC1O60486 1568 aa29.73■■■□□ 2.35
CCND3-212ENST00000510058 REREQ9P2R6 1566 aa29.73■■■□□ 2.35
CCND3-212ENST00000510058 ADGBQ8N7X0 1667 aa29.73■■■□□ 2.35
CCND3-212ENST00000510058 ATP10AO60312 1499 aa29.73■■■□□ 2.35
CCND3-212ENST00000510058 ADGRL2O95490 1459 aa29.68■■■□□ 2.34
CCND3-212ENST00000510058 ANKRD30AQ9BXX3 1397 aa29.64■■■□□ 2.34
CCND3-212ENST00000510058 A2MP01023 1474 aa29.62■■■□□ 2.33
CCND3-212ENST00000510058 ROCK1Q13464 1354 aa29.62■■■□□ 2.33
CCND3-212ENST00000510058 AGLP35573 1532 aa29.61■■■□□ 2.33
CCND3-212ENST00000510058 PTPRKQ15262 1439 aa29.59■■■□□ 2.33
CCND3-212ENST00000510058 NCOA1Q15788 1441 aa29.59■■■□□ 2.33
CCND3-212ENST00000510058 DUOX2Q9NRD8 1548 aa29.59■■■□□ 2.33
CCND3-212ENST00000510058 DHX29Q7Z478 1369 aaKnown RBP29.57■■■□□ 2.32
CCND3-212ENST00000510058 KIF15Q9NS87 1388 aa29.57■■■□□ 2.32
CCND3-212ENST00000510058 ITGAEP38570 1179 aa29.56■■■□□ 2.32
CCND3-212ENST00000510058 CHIC2Q9UKJ5 165 aa29.55■■■□□ 2.32
CCND3-212ENST00000510058 EIF2AK4Q9P2K8 1649 aaKnown RBP29.55■■■□□ 2.32
CCND3-212ENST00000510058 BCORL1Q5H9F3 1711 aa29.54■■■□□ 2.32
CCND3-212ENST00000510058 SIGLEC1Q9BZZ2 1709 aa29.54■■■□□ 2.32
CCND3-212ENST00000510058 ERBINQ96RT1 1412 aa29.53■■■□□ 2.32
CCND3-212ENST00000510058 ARID4BQ4LE39 1312 aaPredicted RBP29.49■■■□□ 2.31
CCND3-212ENST00000510058 RRP7BPQ9NSQ0 103 aa29.49■■■□□ 2.31
CCND3-212ENST00000510058 GCC2Q8IWJ2 1684 aa29.46■■■□□ 2.31
CCND3-212ENST00000510058 ANKRD50Q9ULJ7 1429 aa29.43■■■□□ 2.3
CCND3-212ENST00000510058 HFM1A2PYH4 1435 aa29.42■■■□□ 2.3
CCND3-212ENST00000510058 RNF17Q9BXT8 1623 aaKnown RBP29.42■■■□□ 2.3
CCND3-212ENST00000510058 FAM135AQ9P2D6 1515 aa29.39■■■□□ 2.3
CCND3-212ENST00000510058 ADAMTSL3P82987 1691 aa29.38■■■□□ 2.29
CCND3-212ENST00000510058 NAIPQ13075 1403 aa29.37■■■□□ 2.29
CCND3-212ENST00000510058 KIF3BO15066 747 aa29.37■■■□□ 2.29
CCND3-212ENST00000510058 DEPDC5O75140 1603 aa29.37■■■□□ 2.29
CCND3-212ENST00000510058 PPP6R1Q9UPN7 881 aa29.36■■■□□ 2.29
CCND3-212ENST00000510058 TRIM26Q12899 539 aaPredicted RBP29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms