RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
PDLIM5-213ENST00000509357 CDC42BPBQ9Y5S2 1711 aa13.88□□□□□ -0.19
PDLIM5-213ENST00000509357 ARHGAP5Q13017 1502 aa13.87□□□□□ -0.19
PDLIM5-213ENST00000509357 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-213ENST00000509357 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
PDLIM5-213ENST00000509357 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
PDLIM5-213ENST00000509357 ZNF777Q9ULD5 760 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-213ENST00000509357 MTUS2Q5JR59 1369 aa13.84□□□□□ -0.19
PDLIM5-213ENST00000509357 MYO5CQ9NQX4 1742 aa13.84□□□□□ -0.19
PDLIM5-213ENST00000509357 LRRC9Q6ZRR7 1453 aa13.84□□□□□ -0.19
PDLIM5-213ENST00000509357 PREX2Q70Z35 1606 aa13.83□□□□□ -0.2
PDLIM5-213ENST00000509357 FRMPD1Q5SYB0 1578 aa13.83□□□□□ -0.2
PDLIM5-213ENST00000509357 AFAP1Q8N556 730 aa13.82□□□□□ -0.2
PDLIM5-213ENST00000509357 POGZQ7Z3K3 1410 aa13.81□□□□□ -0.2
PDLIM5-213ENST00000509357 MLECQ14165 292 aa13.8□□□□□ -0.2
PDLIM5-213ENST00000509357 CFDP1Q9UEE9 299 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-213ENST00000509357 CCNB3Q8WWL7 1395 aa13.8□□□□□ -0.2
PDLIM5-213ENST00000509357 ZFYVE16Q7Z3T8 1539 aa13.8□□□□□ -0.2
PDLIM5-213ENST00000509357 SUPT6HQ7KZ85 1726 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-213ENST00000509357 YEATS2Q9ULM3 1422 aa13.79□□□□□ -0.2
PDLIM5-213ENST00000509357 MAGI2Q86UL8 1455 aa13.79□□□□□ -0.2
PDLIM5-213ENST00000509357 GPATCH8Q9UKJ3 1502 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-213ENST00000509357 RICTORQ6R327 1708 aa13.78□□□□□ -0.2
PDLIM5-213ENST00000509357 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
PDLIM5-213ENST00000509357 NCOA2Q15596 1464 aa13.78□□□□□ -0.2
PDLIM5-213ENST00000509357 ZNF518AQ6AHZ1 1483 aa13.78□□□□□ -0.2
PDLIM5-213ENST00000509357 ARHGEF40Q8TER5 1519 aa13.78□□□□□ -0.2
PDLIM5-213ENST00000509357 ZMYM4Q5VZL5 1548 aa13.77□□□□□ -0.21
PDLIM5-213ENST00000509357 SAMD9LQ8IVG5 1584 aa13.77□□□□□ -0.21
PDLIM5-213ENST00000509357 ARHGEF12Q9NZN5 1544 aa13.75□□□□□ -0.21
PDLIM5-213ENST00000509357 HNRNPMP52272 730 aaKnown RBP eCLIP13.75□□□□□ -0.215e-6■■■□□ 18.5
PDLIM5-213ENST00000509357 ATP10AO60312 1499 aa13.74□□□□□ -0.21
PDLIM5-213ENST00000509357 ITSN2Q9NZM3 1697 aa13.73□□□□□ -0.21
PDLIM5-213ENST00000509357 APLP2Q06481 763 aa13.73□□□□□ -0.21
PDLIM5-213ENST00000509357 ABCC1P33527 1531 aa13.73□□□□□ -0.21
PDLIM5-213ENST00000509357 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
PDLIM5-213ENST00000509357 TRAPPC8Q9Y2L5 1435 aa13.73□□□□□ -0.21
PDLIM5-213ENST00000509357 PTPRMP28827 1452 aa13.72□□□□□ -0.21
PDLIM5-213ENST00000509357 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-213ENST00000509357 PPARGC1BQ86YN6 1023 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-213ENST00000509357 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
PDLIM5-213ENST00000509357 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
PDLIM5-213ENST00000509357 PLEKHH2Q8IVE3 1493 aa13.69□□□□□ -0.22
PDLIM5-213ENST00000509357 ESF1Q9H501 851 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-213ENST00000509357 ADAMTSL3P82987 1691 aa13.69□□□□□ -0.22
PDLIM5-213ENST00000509357 MLH3Q9UHC1 1453 aa13.68□□□□□ -0.22
PDLIM5-213ENST00000509357 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-213ENST00000509357 KDM5CP41229 1560 aa13.68□□□□□ -0.22
PDLIM5-213ENST00000509357 SYCP2Q9BX26 1530 aa13.68□□□□□ -0.22
PDLIM5-213ENST00000509357 MADDQ8WXG6 1647 aa13.68□□□□□ -0.22
PDLIM5-213ENST00000509357 HECW2Q9P2P5 1572 aa13.67□□□□□ -0.22
PDLIM5-213ENST00000509357 KIAA1107Q9UPP5 1409 aa13.66□□□□□ -0.22
PDLIM5-213ENST00000509357 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
PDLIM5-213ENST00000509357 CAMSAP2Q08AD1 1489 aa13.65□□□□□ -0.22
PDLIM5-213ENST00000509357 MBD5Q9P267 1494 aa13.65□□□□□ -0.22
PDLIM5-213ENST00000509357 PTPN23Q9H3S7 1636 aa13.64□□□□□ -0.23
PDLIM5-213ENST00000509357 RIMS1Q86UR5 1692 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-213ENST00000509357 DIP2CQ9Y2E4 1556 aa13.63□□□□□ -0.23
PDLIM5-213ENST00000509357 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
PDLIM5-213ENST00000509357 CEBPAP49715 358 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-213ENST00000509357 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
PDLIM5-213ENST00000509357 FGD6Q6ZV73 1430 aa13.61□□□□□ -0.23
PDLIM5-213ENST00000509357 TCOF1Q13428 1488 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-213ENST00000509357 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
PDLIM5-213ENST00000509357 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
PDLIM5-213ENST00000509357 RSPH4AQ5TD94 716 aa13.6□□□□□ -0.23
PDLIM5-213ENST00000509357 INO80Q9ULG1 1556 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-213ENST00000509357 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
PDLIM5-213ENST00000509357 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
PDLIM5-213ENST00000509357 MIA2Q96PC5 1412 aa13.58□□□□□ -0.24
PDLIM5-213ENST00000509357 GGT6Q6P531 493 aa13.58□□□□□ -0.24
PDLIM5-213ENST00000509357 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.24
PDLIM5-213ENST00000509357 ARHGEF5Q12774 1597 aa13.58□□□□□ -0.24
PDLIM5-213ENST00000509357 REREQ9P2R6 1566 aa13.58□□□□□ -0.24
PDLIM5-213ENST00000509357 HSPA2P54652 639 aa13.57□□□□□ -0.24
PDLIM5-213ENST00000509357 AGLP35573 1532 aa13.57□□□□□ -0.24
PDLIM5-213ENST00000509357 A2MP01023 1474 aa13.56□□□□□ -0.24
PDLIM5-213ENST00000509357 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-213ENST00000509357 ADGBQ8N7X0 1667 aa13.56□□□□□ -0.24
PDLIM5-213ENST00000509357 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
PDLIM5-213ENST00000509357 RTEL1-TNFRSF6BF6WH68 1400 aa13.54□□□□□ -0.24
PDLIM5-213ENST00000509357 PTPRKQ15262 1439 aa13.54□□□□□ -0.24
PDLIM5-213ENST00000509357 ABCC5O15440 1437 aa13.53□□□□□ -0.24
PDLIM5-213ENST00000509357 CNTLNQ9NXG0 1405 aa13.53□□□□□ -0.24
PDLIM5-213ENST00000509357 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
PDLIM5-213ENST00000509357 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
PDLIM5-213ENST00000509357 KIF3BO15066 747 aa13.52□□□□□ -0.25
PDLIM5-213ENST00000509357 DHX29Q7Z478 1369 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-213ENST00000509357 RRBP1Q9P2E9 1410 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-213ENST00000509357 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
PDLIM5-213ENST00000509357 DAPK1P53355 1430 aa13.5□□□□□ -0.25
PDLIM5-213ENST00000509357 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
PDLIM5-213ENST00000509357 UHRF1BP1Q6BDS2 1440 aa13.49□□□□□ -0.25
PDLIM5-213ENST00000509357 ZMYM3Q14202 1370 aa13.49□□□□□ -0.25
PDLIM5-213ENST00000509357 SHANK2Q9UPX8 1470 aa13.47□□□□□ -0.25
PDLIM5-213ENST00000509357 WASHC2CQ9Y4E1 1318 aa13.46□□□□□ -0.25
PDLIM5-213ENST00000509357 FAM50AQ14320 339 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-213ENST00000509357 RRP7BPQ9NSQ0 103 aa13.44□□□□□ -0.26
PDLIM5-213ENST00000509357 CHIC2Q9UKJ5 165 aa13.44□□□□□ -0.26
PDLIM5-213ENST00000509357 C3P01024 1663 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms