RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 RICTORQ6R327 1708 aa38.43■■■■□ 3.74
SRPK1-210ENST00000508473 VPS8Q8N3P4 1428 aa38.38■■■■□ 3.74
SRPK1-210ENST00000508473 POGZQ7Z3K3 1410 aa38.37■■■■□ 3.73
SRPK1-210ENST00000508473 CDC42BPBQ9Y5S2 1711 aa38.35■■■■□ 3.73
SRPK1-210ENST00000508473 PREX2Q70Z35 1606 aa38.34■■■■□ 3.73
SRPK1-210ENST00000508473 ZMYM4Q5VZL5 1548 aa38.3■■■■□ 3.72
SRPK1-210ENST00000508473 ZNF777Q9ULD5 760 aaPredicted RBP38.29■■■■□ 3.72
SRPK1-210ENST00000508473 CDC42BPAQ5VT25 1732 aa38.29■■■■□ 3.72
SRPK1-210ENST00000508473 GPATCH8Q9UKJ3 1502 aaKnown RBP38.28■■■■□ 3.72
SRPK1-210ENST00000508473 YEATS2Q9ULM3 1422 aa38.28■■■■□ 3.72
SRPK1-210ENST00000508473 ARHGEF40Q8TER5 1519 aa38.28■■■■□ 3.72
SRPK1-210ENST00000508473 AFAP1Q8N556 730 aa38.27■■■■□ 3.72
SRPK1-210ENST00000508473 CCNB3Q8WWL7 1395 aa38.27■■■■□ 3.72
SRPK1-210ENST00000508473 EHBP1L1Q8N3D4 1523 aa38.27■■■■□ 3.72
SRPK1-210ENST00000508473 ARID4BQ4LE39 1312 aaPredicted RBP38.26■■■■□ 3.72
SRPK1-210ENST00000508473 ZFYVE16Q7Z3T8 1539 aa38.25■■■■□ 3.71
SRPK1-210ENST00000508473 MAGI2Q86UL8 1455 aa38.22■■■■□ 3.71
SRPK1-210ENST00000508473 CFDP1Q9UEE9 299 aaPredicted RBP38.21■■■■□ 3.71
SRPK1-210ENST00000508473 ZNF518AQ6AHZ1 1483 aa38.21■■■■□ 3.71
SRPK1-210ENST00000508473 TIAM1Q13009 1591 aa38.2■■■■□ 3.71
SRPK1-210ENST00000508473 ABCC1P33527 1531 aa38.2■■■■□ 3.71
SRPK1-210ENST00000508473 ARHGEF12Q9NZN5 1544 aa38.2■■■■□ 3.71
SRPK1-210ENST00000508473 MYT1LQ9UL68 1186 aa38.18■■■■□ 3.7
SRPK1-210ENST00000508473 TRAPPC8Q9Y2L5 1435 aa38.17■■■■□ 3.7
SRPK1-210ENST00000508473 SAMD9LQ8IVG5 1584 aa38.13■■■■□ 3.69
SRPK1-210ENST00000508473 KDM5CP41229 1560 aa38.11■■■■□ 3.69
SRPK1-210ENST00000508473 HNRNPMP52272 730 aaKnown RBP eCLIP38.1■■■■□ 3.692e-7■■■■□ 25.4
SRPK1-210ENST00000508473 ITSN2Q9NZM3 1697 aa38.1■■■■□ 3.69
SRPK1-210ENST00000508473 NCOA2Q15596 1464 aa38.09■■■■□ 3.69
SRPK1-210ENST00000508473 KANK4Q5T7N3 995 aaPredicted RBP38.07■■■■□ 3.68
SRPK1-210ENST00000508473 ATP10AO60312 1499 aa38.07■■■■□ 3.68
SRPK1-210ENST00000508473 LRRC9Q6ZRR7 1453 aa38.07■■■■□ 3.68
SRPK1-210ENST00000508473 SYCP2Q9BX26 1530 aa38.06■■■■□ 3.68
SRPK1-210ENST00000508473 SUPT6HQ7KZ85 1726 aaKnown RBP38.05■■■■□ 3.68
SRPK1-210ENST00000508473 ZNF644Q9H582 1327 aaPredicted RBP38.05■■■■□ 3.68
SRPK1-210ENST00000508473 BCORL1Q5H9F3 1711 aa38.04■■■■□ 3.68
SRPK1-210ENST00000508473 HECW2Q9P2P5 1572 aa38.03■■■■□ 3.68
SRPK1-210ENST00000508473 ADAMTSL3P82987 1691 aa38.02■■■■□ 3.68
SRPK1-210ENST00000508473 SIGLEC1Q9BZZ2 1709 aa38.02■■■■□ 3.68
SRPK1-210ENST00000508473 C9orf84Q5VXU9 1444 aa38.02■■■■□ 3.68
SRPK1-210ENST00000508473 MLH3Q9UHC1 1453 aa38.02■■■■□ 3.68
SRPK1-210ENST00000508473 MAP3K1Q13233 1512 aa38.02■■■■□ 3.68
SRPK1-210ENST00000508473 MLECQ14165 292 aa38.01■■■■□ 3.68
SRPK1-210ENST00000508473 PLEKHH2Q8IVE3 1493 aa38.01■■■■□ 3.67
SRPK1-210ENST00000508473 KIAA1107Q9UPP5 1409 aa38■■■■□ 3.67
SRPK1-210ENST00000508473 APLP2Q06481 763 aa37.99■■■■□ 3.67
SRPK1-210ENST00000508473 DIP2CQ9Y2E4 1556 aa37.95■■■■□ 3.67
SRPK1-210ENST00000508473 SPAG9O60271 1321 aaKnown RBP37.93■■■■□ 3.66
SRPK1-210ENST00000508473 MADDQ8WXG6 1647 aa37.93■■■■□ 3.66
SRPK1-210ENST00000508473 ABCA6Q8N139 1617 aa37.92■■■■□ 3.66
SRPK1-210ENST00000508473 PTPRMP28827 1452 aa37.91■■■■□ 3.66
SRPK1-210ENST00000508473 KIDINS220Q9ULH0 1771 aa37.88■■■■□ 3.65
SRPK1-210ENST00000508473 MBD5Q9P267 1494 aa37.84■■■■□ 3.65
SRPK1-210ENST00000508473 CAMSAP2Q08AD1 1489 aa37.83■■■■□ 3.65
SRPK1-210ENST00000508473 RIMS1Q86UR5 1692 aaKnown RBP37.82■■■■□ 3.64
SRPK1-210ENST00000508473 PLPPR3Q6T4P5 718 aa37.81■■■■□ 3.64
SRPK1-210ENST00000508473 REREQ9P2R6 1566 aa37.8■■■■□ 3.64
SRPK1-210ENST00000508473 ATP7AQ04656 1500 aa37.79■■■■□ 3.64
SRPK1-210ENST00000508473 INO80Q9ULG1 1556 aaPredicted RBP37.75■■■■□ 3.63
SRPK1-210ENST00000508473 MYOM3Q5VTT5 1437 aa37.74■■■■□ 3.63
SRPK1-210ENST00000508473 AGLP35573 1532 aa37.71■■■■□ 3.63
SRPK1-210ENST00000508473 CCDC141Q6ZP82 1450 aa37.71■■■■□ 3.63
SRPK1-210ENST00000508473 FER1L4A9Z1Z3 1794 aa37.7■■■■□ 3.63
SRPK1-210ENST00000508473 RSPH4AQ5TD94 716 aa37.68■■■■□ 3.62
SRPK1-210ENST00000508473 MIA2Q96PC5 1412 aa37.66■■■■□ 3.62
SRPK1-210ENST00000508473 A2MP01023 1474 aa37.65■■■■□ 3.62
SRPK1-210ENST00000508473 RTEL1-TNFRSF6BF6WH68 1400 aa37.64■■■■□ 3.62
SRPK1-210ENST00000508473 ARHGEF5Q12774 1597 aa37.6■■■■□ 3.61
SRPK1-210ENST00000508473 TSPY4P0CV99 314 aa37.6■■■■□ 3.61
SRPK1-210ENST00000508473 TSPY10P0CW01 314 aa37.6■■■■□ 3.61
SRPK1-210ENST00000508473 CEBPAP49715 358 aaPredicted RBP37.6■■■■□ 3.61
SRPK1-210ENST00000508473 ESF1Q9H501 851 aaKnown RBP37.58■■■■□ 3.61
SRPK1-210ENST00000508473 PLXNC1O60486 1568 aa37.56■■■■□ 3.6
SRPK1-210ENST00000508473 ADGBQ8N7X0 1667 aa37.53■■■■□ 3.6
SRPK1-210ENST00000508473 GGT6Q6P531 493 aa37.51■■■■□ 3.6
SRPK1-210ENST00000508473 DHX29Q7Z478 1369 aaKnown RBP37.51■■■■□ 3.59
SRPK1-210ENST00000508473 FGD6Q6ZV73 1430 aa37.49■■■■□ 3.59
SRPK1-210ENST00000508473 PTPN23Q9H3S7 1636 aa37.48■■■■□ 3.59
SRPK1-210ENST00000508473 LMTK3Q96Q04 1460 aa37.44■■■■□ 3.58
SRPK1-210ENST00000508473 CNTLNQ9NXG0 1405 aa37.43■■■■□ 3.58
SRPK1-210ENST00000508473 KIF3BO15066 747 aa37.42■■■■□ 3.58
SRPK1-210ENST00000508473 PPARGC1BQ86YN6 1023 aaKnown RBP37.4■■■■□ 3.58
SRPK1-210ENST00000508473 MAST1Q9Y2H9 1570 aa37.4■■■■□ 3.58
SRPK1-210ENST00000508473 TCOF1Q13428 1488 aaKnown RBP37.39■■■■□ 3.58
SRPK1-210ENST00000508473 ABCC5O15440 1437 aa37.39■■■■□ 3.58
SRPK1-210ENST00000508473 HSPA2P54652 639 aa37.36■■■■□ 3.57
SRPK1-210ENST00000508473 C3P01024 1663 aa37.36■■■■□ 3.57
SRPK1-210ENST00000508473 ZMYM3Q14202 1370 aa37.34■■■■□ 3.57
SRPK1-210ENST00000508473 FAM50AQ14320 339 aaKnown RBP37.33■■■■□ 3.57
SRPK1-210ENST00000508473 DAPK1P53355 1430 aa37.33■■■■□ 3.57
SRPK1-210ENST00000508473 PPP6R1Q9UPN7 881 aa37.31■■■■□ 3.56
SRPK1-210ENST00000508473 CLTCQ00610 1675 aaKnown RBP37.3■■■■□ 3.56
SRPK1-210ENST00000508473 SHANK2Q9UPX8 1470 aa37.27■■■■□ 3.56
SRPK1-210ENST00000508473 DNMT1P26358 1616 aaKnown RBP37.27■■■■□ 3.56
SRPK1-210ENST00000508473 RRP7BPQ9NSQ0 103 aa37.26■■■■□ 3.56
SRPK1-210ENST00000508473 CHIC2Q9UKJ5 165 aa37.26■■■■□ 3.56
SRPK1-210ENST00000508473 MROH2AA6NES4 1674 aa37.25■■■■□ 3.55
SRPK1-210ENST00000508473 CROCC2H7BZ55 1655 aa37.25■■■■□ 3.55
SRPK1-210ENST00000508473 UHRF1BP1Q6BDS2 1440 aa37.23■■■■□ 3.55
SRPK1-210ENST00000508473 PREX1Q8TCU6 1659 aa37.23■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms