RNA–Protein interactions for RNA: ENST00000508457.1

C4orf46-202, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 5 BASIC

Gene C4orf46, Length 3,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-202ENST00000508457 TNIKQ9UKE5 1360 aa11.84□□□□□ -0.51
C4orf46-202ENST00000508457 WASHC2CQ9Y4E1 1318 aa11.83□□□□□ -0.52
C4orf46-202ENST00000508457 B4GALNT3Q6L9W6 998 aa11.83□□□□□ -0.52
C4orf46-202ENST00000508457 FAM43AQ8N2R8 423 aa11.83□□□□□ -0.52
C4orf46-202ENST00000508457 CANXP27824 592 aaKnown RBP11.82□□□□□ -0.52
C4orf46-202ENST00000508457 GSE1Q14687 1217 aa11.82□□□□□ -0.52
C4orf46-202ENST00000508457 FOXD1Q16676 465 aa11.82□□□□□ -0.52
C4orf46-202ENST00000508457 TULP1O00294 542 aaPredicted RBP11.81□□□□□ -0.52
C4orf46-202ENST00000508457 GTF2E1P29083 439 aaPredicted RBP11.8□□□□□ -0.52
C4orf46-202ENST00000508457 EEA1Q15075 1411 aa11.8□□□□□ -0.52
C4orf46-202ENST00000508457 FRAT1Q92837 279 aaPredicted RBP11.8□□□□□ -0.52
C4orf46-202ENST00000508457 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
C4orf46-202ENST00000508457 SHROOM2Q13796 1616 aa11.79□□□□□ -0.52
C4orf46-202ENST00000508457 ABCA10Q8WWZ4 1543 aa11.79□□□□□ -0.52
C4orf46-202ENST00000508457 BRD2P25440 801 aaKnown RBP11.78□□□□□ -0.52
C4orf46-202ENST00000508457 GRIN2BQ13224 1484 aa11.77□□□□□ -0.53
C4orf46-202ENST00000508457 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
C4orf46-202ENST00000508457 VGLL3A8MV65 326 aa11.76□□□□□ -0.53
C4orf46-202ENST00000508457 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
C4orf46-202ENST00000508457 ARAP1Q96P48 1450 aa11.75□□□□□ -0.53
C4orf46-202ENST00000508457 PRDM4Q9UKN5 801 aa11.75□□□□□ -0.53
C4orf46-202ENST00000508457 ZHX1Q9UKY1 873 aaPredicted RBP11.75□□□□□ -0.53
C4orf46-202ENST00000508457 PNNQ9H307 717 aaKnown RBP11.75□□□□□ -0.53
C4orf46-202ENST00000508457 RRAGDQ9NQL2 400 aaPredicted RBP11.75□□□□□ -0.53
C4orf46-202ENST00000508457 CNGB1Q14028 1251 aaPredicted RBP11.74□□□□□ -0.53
C4orf46-202ENST00000508457 ARID3AQ99856 593 aa11.74□□□□□ -0.53
C4orf46-202ENST00000508457 GAPVD1Q14C86 1478 aa11.74□□□□□ -0.53
C4orf46-202ENST00000508457 RSPH4AQ5TD94 716 aa11.74□□□□□ -0.53
C4orf46-202ENST00000508457 STAC3Q96MF2 364 aa11.73□□□□□ -0.53
C4orf46-202ENST00000508457 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
C4orf46-202ENST00000508457 DCAF11Q8TEB1 546 aa11.73□□□□□ -0.53
C4orf46-202ENST00000508457 ADAMTS12P58397 1594 aa11.73□□□□□ -0.53
C4orf46-202ENST00000508457 FAM50AQ14320 339 aaKnown RBP11.72□□□□□ -0.53
C4orf46-202ENST00000508457 FHOD3Q2V2M9 1422 aa11.72□□□□□ -0.53
C4orf46-202ENST00000508457 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.53
C4orf46-202ENST00000508457 IPO4Q8TEX9 1081 aaKnown RBP11.71□□□□□ -0.53
C4orf46-202ENST00000508457 ERICH3Q5RHP9 1530 aa11.71□□□□□ -0.54
C4orf46-202ENST00000508457 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
C4orf46-202ENST00000508457 MAPK8IP2Q13387 824 aaPredicted RBP11.7□□□□□ -0.54
C4orf46-202ENST00000508457 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
C4orf46-202ENST00000508457 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
C4orf46-202ENST00000508457 PPM1GO15355 546 aaPredicted RBP11.67□□□□□ -0.54
C4orf46-202ENST00000508457 NUP160Q12769 1436 aa11.67□□□□□ -0.54
C4orf46-202ENST00000508457 CALD1Q05682 793 aaKnown RBP11.67□□□□□ -0.54
C4orf46-202ENST00000508457 SECISBP2LQ93073 1101 aaKnown RBP11.66□□□□□ -0.54
C4orf46-202ENST00000508457 DDX10Q13206 875 aaKnown RBP11.65□□□□□ -0.54
C4orf46-202ENST00000508457 ZNF830Q96NB3 372 aaPredicted RBP11.62□□□□□ -0.55
C4orf46-202ENST00000508457 PRDM10Q9NQV6 1147 aa11.62□□□□□ -0.55
C4orf46-202ENST00000508457 NFKBIBQ15653 356 aa11.61□□□□□ -0.55
C4orf46-202ENST00000508457 HNRNPUQ00839 825 aaKnown RBP eCLIP11.61□□□□□ -0.55
C4orf46-202ENST00000508457 C14orf37Q86TY3 774 aa11.61□□□□□ -0.55
C4orf46-202ENST00000508457 ZNF777Q9ULD5 760 aaPredicted RBP11.61□□□□□ -0.55
C4orf46-202ENST00000508457 KIF21BO75037 1637 aa11.6□□□□□ -0.55
C4orf46-202ENST00000508457 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
C4orf46-202ENST00000508457 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
C4orf46-202ENST00000508457 VPS8Q8N3P4 1428 aa11.6□□□□□ -0.55
C4orf46-202ENST00000508457 FTSJ3Q8IY81 847 aaKnown RBP11.6□□□□□ -0.55
C4orf46-202ENST00000508457 CEP170Q5SW79 1584 aa11.6□□□□□ -0.55
C4orf46-202ENST00000508457 ARHGAP35Q9NRY4 1499 aa11.6□□□□□ -0.55
C4orf46-202ENST00000508457 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
C4orf46-202ENST00000508457 SIN3AQ96ST3 1273 aa11.59□□□□□ -0.55
C4orf46-202ENST00000508457 SLC4A3P48751 1232 aa11.58□□□□□ -0.56
C4orf46-202ENST00000508457 E9PSI1 815 aa11.58□□□□□ -0.56
C4orf46-202ENST00000508457 CUL7Q14999 1698 aa11.58□□□□□ -0.56
C4orf46-202ENST00000508457 FHAD1B1AJZ9 1412 aa11.57□□□□□ -0.56
C4orf46-202ENST00000508457 HOMEZQ8IX15 550 aa11.57□□□□□ -0.56
C4orf46-202ENST00000508457 PDCL3Q9H2J4 239 aa11.57□□□□□ -0.56
C4orf46-202ENST00000508457 ANP32BQ92688 251 aaKnown RBP11.55□□□□□ -0.56
C4orf46-202ENST00000508457 CNPY4Q8N129 248 aa11.54□□□□□ -0.56
C4orf46-202ENST00000508457 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
C4orf46-202ENST00000508457 CDK11BP21127 795 aaKnown RBP11.52□□□□□ -0.56
C4orf46-202ENST00000508457 MAPKBP1O60336 1514 aa11.52□□□□□ -0.56
C4orf46-202ENST00000508457 MTUS2Q5JR59 1369 aa11.52□□□□□ -0.57
C4orf46-202ENST00000508457 KIF13AQ9H1H9 1805 aa11.51□□□□□ -0.57
C4orf46-202ENST00000508457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
C4orf46-202ENST00000508457 FRAT2O75474 233 aaPredicted RBP11.5□□□□□ -0.57
C4orf46-202ENST00000508457 CERS3Q8IU89 383 aa11.5□□□□□ -0.57
C4orf46-202ENST00000508457 WWC1Q8IX03 1113 aa11.5□□□□□ -0.57
C4orf46-202ENST00000508457 FAM13BQ9NYF5 915 aa11.49□□□□□ -0.57
C4orf46-202ENST00000508457 TMEM51Q9NW97 253 aa11.49□□□□□ -0.57
C4orf46-202ENST00000508457 HIRIP3Q9BW71 556 aaPredicted RBP11.48□□□□□ -0.57
C4orf46-202ENST00000508457 NCLP19338 710 aaKnown RBP11.48□□□□□ -0.57
C4orf46-202ENST00000508457 TEX2Q8IWB9 1127 aa11.48□□□□□ -0.57
C4orf46-202ENST00000508457 ANP32CO43423 234 aa11.48□□□□□ -0.57
C4orf46-202ENST00000508457 POLR3GLQ9BT43 218 aa11.48□□□□□ -0.57
C4orf46-202ENST00000508457 RRP7BPQ9NSQ0 103 aa11.48□□□□□ -0.57
C4orf46-202ENST00000508457 AEBP1Q8IUX7 1158 aa11.47□□□□□ -0.57
C4orf46-202ENST00000508457 ZBTB22O15209 634 aa11.46□□□□□ -0.58
C4orf46-202ENST00000508457 KCNG1Q9UIX4 513 aa11.46□□□□□ -0.58
C4orf46-202ENST00000508457 CLCN1P35523 988 aa11.45□□□□□ -0.58
C4orf46-202ENST00000508457 DNTTIP2Q5QJE6 756 aaKnown RBP11.45□□□□□ -0.58
C4orf46-202ENST00000508457 ZNF644Q9H582 1327 aaPredicted RBP11.44□□□□□ -0.58
C4orf46-202ENST00000508457 PPP4R3BQ5MIZ7 849 aa11.44□□□□□ -0.58
C4orf46-202ENST00000508457 GLI2P10070 1586 aa11.43□□□□□ -0.58
C4orf46-202ENST00000508457 ERCC6L2Q5T890 1561 aa11.43□□□□□ -0.58
C4orf46-202ENST00000508457 TNNT2P45379 298 aaPredicted RBP11.42□□□□□ -0.58
C4orf46-202ENST00000508457 POGKQ9P215 609 aa11.42□□□□□ -0.58
C4orf46-202ENST00000508457 PATL2C9JE40 543 aaKnown RBP11.42□□□□□ -0.58
C4orf46-202ENST00000508457 PHLDB1Q86UU1 1377 aa11.42□□□□□ -0.58
C4orf46-202ENST00000508457 CYB5RLQ6IPT4 315 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms