RNA–Protein interactions for RNA: ENST00000508457.1

C4orf46-202, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 5 BASIC

Gene C4orf46, Length 3,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-202ENST00000508457 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
C4orf46-202ENST00000508457 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
C4orf46-202ENST00000508457 MYT1Q01538 1121 aa15.25■□□□□ 0.03
C4orf46-202ENST00000508457 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
C4orf46-202ENST00000508457 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
C4orf46-202ENST00000508457 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
C4orf46-202ENST00000508457 HRCP23327 699 aa14.68□□□□□ -0.06
C4orf46-202ENST00000508457 PPARGC1BQ86YN6 1023 aaKnown RBP14.66□□□□□ -0.06
C4orf46-202ENST00000508457 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
C4orf46-202ENST00000508457 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
C4orf46-202ENST00000508457 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
C4orf46-202ENST00000508457 BCL11AQ9H165 835 aa14.45□□□□□ -0.1
C4orf46-202ENST00000508457 ABCC9O60706 1549 aa14.41□□□□□ -0.1
C4orf46-202ENST00000508457 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
C4orf46-202ENST00000508457 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
C4orf46-202ENST00000508457 ERICH6Q7L0X2 663 aa14.17□□□□□ -0.14
C4orf46-202ENST00000508457 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
C4orf46-202ENST00000508457 RB1CC1Q8TDY2 1594 aa14.15□□□□□ -0.14
C4orf46-202ENST00000508457 NACADO15069 1562 aa14.14□□□□□ -0.15
C4orf46-202ENST00000508457 APLP2Q06481 763 aa13.99□□□□□ -0.17
C4orf46-202ENST00000508457 CENPBP07199 599 aaPredicted RBP13.97□□□□□ -0.17
C4orf46-202ENST00000508457 SUPT5HO00267 1087 aaKnown RBP13.97□□□□□ -0.17
C4orf46-202ENST00000508457 GTF3C3Q9Y5Q9 886 aa13.95□□□□□ -0.18
C4orf46-202ENST00000508457 DCAF1Q9Y4B6 1507 aa13.91□□□□□ -0.18
C4orf46-202ENST00000508457 SLC24A1O60721 1099 aa13.89□□□□□ -0.19
C4orf46-202ENST00000508457 UNC13AQ9UPW8 1703 aa13.88□□□□□ -0.19
C4orf46-202ENST00000508457 NEUROD1Q13562 356 aa13.85□□□□□ -0.19
C4orf46-202ENST00000508457 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
C4orf46-202ENST00000508457 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
C4orf46-202ENST00000508457 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
C4orf46-202ENST00000508457 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
C4orf46-202ENST00000508457 ANP32EQ9BTT0 268 aa13.64□□□□□ -0.23
C4orf46-202ENST00000508457 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
C4orf46-202ENST00000508457 ANO8Q9HCE9 1232 aaPredicted RBP13.55□□□□□ -0.24
C4orf46-202ENST00000508457 EIF5BO60841 1220 aaKnown RBP13.5□□□□□ -0.25
C4orf46-202ENST00000508457 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
C4orf46-202ENST00000508457 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
C4orf46-202ENST00000508457 PLEKHG5O94827 1062 aa13.45□□□□□ -0.26
C4orf46-202ENST00000508457 ZEB1P37275 1124 aaPredicted RBP13.4□□□□□ -0.26
C4orf46-202ENST00000508457 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
C4orf46-202ENST00000508457 CCDC136Q96JN2 1154 aa13.36□□□□□ -0.27
C4orf46-202ENST00000508457 EIF4G1Q04637 1599 aaKnown RBP13.31□□□□□ -0.28
C4orf46-202ENST00000508457 CC2D2AQ9P2K1 1620 aa13.31□□□□□ -0.28
C4orf46-202ENST00000508457 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
C4orf46-202ENST00000508457 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
C4orf46-202ENST00000508457 SALL2Q9Y467 1007 aaPredicted RBP13.21□□□□□ -0.29
C4orf46-202ENST00000508457 UBE2Q2Q8WVN8 375 aa13.15□□□□□ -0.3
C4orf46-202ENST00000508457 CECR2Q9BXF3 1484 aa13.15□□□□□ -0.3
C4orf46-202ENST00000508457 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
C4orf46-202ENST00000508457 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
C4orf46-202ENST00000508457 DIEXFQ68CQ4 756 aaKnown RBP13.13□□□□□ -0.31
C4orf46-202ENST00000508457 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
C4orf46-202ENST00000508457 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
C4orf46-202ENST00000508457 PKNOX2Q96KN3 472 aa13.06□□□□□ -0.32
C4orf46-202ENST00000508457 RSF1Q96T23 1441 aaPredicted RBP12.99□□□□□ -0.33
C4orf46-202ENST00000508457 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
C4orf46-202ENST00000508457 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
C4orf46-202ENST00000508457 CHIC1Q5VXU3 224 aa12.96□□□□□ -0.33
C4orf46-202ENST00000508457 NCAPD3P42695 1498 aa12.95□□□□□ -0.34
C4orf46-202ENST00000508457 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
C4orf46-202ENST00000508457 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
C4orf46-202ENST00000508457 SMARCA2P51531 1590 aa12.91□□□□□ -0.34
C4orf46-202ENST00000508457 CUX2O14529 1486 aa12.9□□□□□ -0.34
C4orf46-202ENST00000508457 DEKP35659 375 aaKnown RBP12.88□□□□□ -0.35
C4orf46-202ENST00000508457 SUPT16HQ9Y5B9 1047 aaKnown RBP12.88□□□□□ -0.35
C4orf46-202ENST00000508457 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
C4orf46-202ENST00000508457 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
C4orf46-202ENST00000508457 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
C4orf46-202ENST00000508457 BCANQ96GW7 911 aa12.85□□□□□ -0.35
C4orf46-202ENST00000508457 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
C4orf46-202ENST00000508457 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
C4orf46-202ENST00000508457 WIZO95785 1651 aa12.78□□□□□ -0.36
C4orf46-202ENST00000508457 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
C4orf46-202ENST00000508457 A0A0U1RQG5 324 aaPredicted RBP12.76□□□□□ -0.37
C4orf46-202ENST00000508457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
C4orf46-202ENST00000508457 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
C4orf46-202ENST00000508457 RBM19Q9Y4C8 960 aaKnown RBP12.74□□□□□ -0.37
C4orf46-202ENST00000508457 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
C4orf46-202ENST00000508457 IL27Q8NEV9 243 aa12.72□□□□□ -0.37
C4orf46-202ENST00000508457 MSH5O43196 834 aa12.71□□□□□ -0.38
C4orf46-202ENST00000508457 RANGAP1P46060 587 aaPredicted RBP12.7□□□□□ -0.38
C4orf46-202ENST00000508457 MIER1Q8N108 512 aa12.7□□□□□ -0.38
C4orf46-202ENST00000508457 THOC2Q8NI27 1593 aaKnown RBP12.7□□□□□ -0.38
C4orf46-202ENST00000508457 ERICH6BQ5W0A0 696 aa12.66□□□□□ -0.38
C4orf46-202ENST00000508457 NBR1Q14596 966 aa12.64□□□□□ -0.39
C4orf46-202ENST00000508457 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
C4orf46-202ENST00000508457 PDE4CQ08493 712 aa12.58□□□□□ -0.39
C4orf46-202ENST00000508457 BAZ1BQ9UIG0 1483 aaKnown RBP12.58□□□□□ -0.4
C4orf46-202ENST00000508457 NEFLP07196 543 aa12.58□□□□□ -0.4
C4orf46-202ENST00000508457 DNAJC5Q9H3Z4 198 aa12.58□□□□□ -0.4
C4orf46-202ENST00000508457 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
C4orf46-202ENST00000508457 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
C4orf46-202ENST00000508457 ITGAEP38570 1179 aa12.56□□□□□ -0.4
C4orf46-202ENST00000508457 PRDM2Q13029 1718 aa12.55□□□□□ -0.4
C4orf46-202ENST00000508457 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
C4orf46-202ENST00000508457 ZMYND15Q9H091 742 aa12.54□□□□□ -0.4
C4orf46-202ENST00000508457 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
C4orf46-202ENST00000508457 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
C4orf46-202ENST00000508457 WDR62O43379 1518 aa12.51□□□□□ -0.41
C4orf46-202ENST00000508457 PDIA4P13667 645 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms