RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 ARHGAP5Q13017 1502 aa32.11■■■□□ 2.73
HOXC9-203ENST00000508190 ARAP3Q8WWN8 1544 aa32.08■■■□□ 2.73
HOXC9-203ENST00000508190 FGD6Q6ZV73 1430 aa32.05■■■□□ 2.72
HOXC9-203ENST00000508190 PTPN23Q9H3S7 1636 aa32.04■■■□□ 2.72
HOXC9-203ENST00000508190 CFDP1Q9UEE9 299 aaPredicted RBP32.03■■■□□ 2.72
HOXC9-203ENST00000508190 SAMD9LQ8IVG5 1584 aa32.02■■■□□ 2.72
HOXC9-203ENST00000508190 FANCAO15360 1455 aa32.01■■■□□ 2.71
HOXC9-203ENST00000508190 CFAP74Q9C0B2 1584 aa32.01■■■□□ 2.71
HOXC9-203ENST00000508190 MIA2Q96PC5 1412 aa32■■■□□ 2.71
HOXC9-203ENST00000508190 ZNF777Q9ULD5 760 aaPredicted RBP31.97■■■□□ 2.71
HOXC9-203ENST00000508190 CAMSAP2Q08AD1 1489 aa31.97■■■□□ 2.71
HOXC9-203ENST00000508190 ZNF644Q9H582 1327 aaPredicted RBP31.96■■■□□ 2.71
HOXC9-203ENST00000508190 RRBP1Q9P2E9 1410 aaKnown RBP31.95■■■□□ 2.71
HOXC9-203ENST00000508190 EFCAB2Q5VUJ9 269 aa31.95■■■□□ 2.7
HOXC9-203ENST00000508190 TEX14Q8IWB6 1497 aa31.94■■■□□ 2.7
HOXC9-203ENST00000508190 TCOF1Q13428 1488 aaKnown RBP31.93■■■□□ 2.7
HOXC9-203ENST00000508190 ABCC1P33527 1531 aa31.92■■■□□ 2.7
HOXC9-203ENST00000508190 NEO1Q92859 1461 aa31.91■■■□□ 2.7
HOXC9-203ENST00000508190 AKNAQ7Z591 1439 aa31.9■■■□□ 2.7
HOXC9-203ENST00000508190 SYCP2Q9BX26 1530 aa31.89■■■□□ 2.7
HOXC9-203ENST00000508190 ADGRL1O94910 1474 aa31.86■■■□□ 2.69
HOXC9-203ENST00000508190 FAM50AQ14320 339 aaKnown RBP31.86■■■□□ 2.69
HOXC9-203ENST00000508190 ARHGEF12Q9NZN5 1544 aa31.85■■■□□ 2.69
HOXC9-203ENST00000508190 PLEKHH2Q8IVE3 1493 aa31.83■■■□□ 2.69
HOXC9-203ENST00000508190 DNMT1P26358 1616 aaKnown RBP31.8■■■□□ 2.68
HOXC9-203ENST00000508190 HNRNPMP52272 730 aaKnown RBP eCLIP31.8■■■□□ 2.68
HOXC9-203ENST00000508190 SCAPERQ9BY12 1400 aa31.79■■■□□ 2.68
HOXC9-203ENST00000508190 KIAA1107Q9UPP5 1409 aa31.79■■■□□ 2.68
HOXC9-203ENST00000508190 MBD5Q9P267 1494 aa31.78■■■□□ 2.68
HOXC9-203ENST00000508190 CROCC2H7BZ55 1655 aa31.78■■■□□ 2.68
HOXC9-203ENST00000508190 ARHGEF5Q12774 1597 aa31.78■■■□□ 2.68
HOXC9-203ENST00000508190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.77■■■□□ 2.682e-6■□□□□ 11.3
HOXC9-203ENST00000508190 RICTORQ6R327 1708 aa31.77■■■□□ 2.68
HOXC9-203ENST00000508190 TRAPPC8Q9Y2L5 1435 aa31.74■■■□□ 2.67
HOXC9-203ENST00000508190 FRMPD1Q5SYB0 1578 aa31.72■■■□□ 2.67
HOXC9-203ENST00000508190 DENND4BO75064 1496 aaPredicted RBP31.71■■■□□ 2.67
HOXC9-203ENST00000508190 CCDC141Q6ZP82 1450 aa31.71■■■□□ 2.67
HOXC9-203ENST00000508190 COL17A1Q9UMD9 1497 aaPredicted RBP31.7■■■□□ 2.67
HOXC9-203ENST00000508190 DAPK1P53355 1430 aa31.7■■■□□ 2.67
HOXC9-203ENST00000508190 POGZQ7Z3K3 1410 aa31.7■■■□□ 2.67
HOXC9-203ENST00000508190 ABCC5O15440 1437 aa31.7■■■□□ 2.66
HOXC9-203ENST00000508190 ITGAEP38570 1179 aa31.68■■■□□ 2.66
HOXC9-203ENST00000508190 KDM6BO15054 1643 aa31.68■■■□□ 2.66
HOXC9-203ENST00000508190 ZNF518AQ6AHZ1 1483 aa31.66■■■□□ 2.66
HOXC9-203ENST00000508190 KDM5CP41229 1560 aa31.65■■■□□ 2.66
HOXC9-203ENST00000508190 RAPGEF3O95398 923 aa31.65■■■□□ 2.66
HOXC9-203ENST00000508190 TRIM26Q12899 539 aaPredicted RBP31.65■■■□□ 2.66
HOXC9-203ENST00000508190 AFAP1Q8N556 730 aa31.65■■■□□ 2.66
HOXC9-203ENST00000508190 PTPRKQ15262 1439 aa31.64■■■□□ 2.66
HOXC9-203ENST00000508190 ADGBQ8N7X0 1667 aa31.62■■■□□ 2.65
HOXC9-203ENST00000508190 MAST1Q9Y2H9 1570 aa31.6■■■□□ 2.65
HOXC9-203ENST00000508190 SHANK2Q9UPX8 1470 aa31.6■■■□□ 2.65
HOXC9-203ENST00000508190 RSPH4AQ5TD94 716 aa31.59■■■□□ 2.65
HOXC9-203ENST00000508190 INO80Q9ULG1 1556 aaPredicted RBP31.59■■■□□ 2.65
HOXC9-203ENST00000508190 KIDINS220Q9ULH0 1771 aa31.58■■■□□ 2.65
HOXC9-203ENST00000508190 HECW2Q9P2P5 1572 aa31.58■■■□□ 2.65
HOXC9-203ENST00000508190 C9orf84Q5VXU9 1444 aa31.58■■■□□ 2.65
HOXC9-203ENST00000508190 ZFYVE16Q7Z3T8 1539 aa31.57■■■□□ 2.65
HOXC9-203ENST00000508190 ZMYM4Q5VZL5 1548 aa31.57■■■□□ 2.64
HOXC9-203ENST00000508190 CHIC2Q9UKJ5 165 aa31.55■■■□□ 2.64
HOXC9-203ENST00000508190 ATP7AQ04656 1500 aa31.55■■■□□ 2.64
HOXC9-203ENST00000508190 TSPY4P0CV99 314 aa31.54■■■□□ 2.64
HOXC9-203ENST00000508190 TSPY10P0CW01 314 aa31.54■■■□□ 2.64
HOXC9-203ENST00000508190 SPAG9O60271 1321 aaKnown RBP31.53■■■□□ 2.64
HOXC9-203ENST00000508190 MLH3Q9UHC1 1453 aa31.5■■■□□ 2.63
HOXC9-203ENST00000508190 ABCA6Q8N139 1617 aa31.49■■■□□ 2.63
HOXC9-203ENST00000508190 PLXNC1O60486 1568 aa31.49■■■□□ 2.63
HOXC9-203ENST00000508190 ADGRL2O95490 1459 aa31.49■■■□□ 2.63
HOXC9-203ENST00000508190 RTEL1-TNFRSF6BF6WH68 1400 aa31.47■■■□□ 2.63
HOXC9-203ENST00000508190 MYT1LQ9UL68 1186 aa31.46■■■□□ 2.63
HOXC9-203ENST00000508190 YEATS2Q9ULM3 1422 aa31.43■■■□□ 2.62
HOXC9-203ENST00000508190 DIP2CQ9Y2E4 1556 aa31.43■■■□□ 2.62
HOXC9-203ENST00000508190 NCOA1Q15788 1441 aa31.43■■■□□ 2.62
HOXC9-203ENST00000508190 GCC2Q8IWJ2 1684 aa31.43■■■□□ 2.62
HOXC9-203ENST00000508190 ROCK1Q13464 1354 aa31.42■■■□□ 2.62
HOXC9-203ENST00000508190 MAGI2Q86UL8 1455 aa31.42■■■□□ 2.62
HOXC9-203ENST00000508190 ANKRD30AQ9BXX3 1397 aa31.41■■■□□ 2.62
HOXC9-203ENST00000508190 PCGF6Q9BYE7 350 aa31.41■■■□□ 2.62
HOXC9-203ENST00000508190 RRP7BPQ9NSQ0 103 aa31.41■■■□□ 2.62
HOXC9-203ENST00000508190 ARHGEF40Q8TER5 1519 aa31.41■■■□□ 2.62
HOXC9-203ENST00000508190 KIF15Q9NS87 1388 aa31.37■■■□□ 2.61
HOXC9-203ENST00000508190 HFM1A2PYH4 1435 aa31.33■■■□□ 2.61
HOXC9-203ENST00000508190 DUOX2Q9NRD8 1548 aa31.32■■■□□ 2.6
HOXC9-203ENST00000508190 NAIPQ13075 1403 aa31.32■■■□□ 2.6
HOXC9-203ENST00000508190 SIGLEC1Q9BZZ2 1709 aa31.31■■■□□ 2.6
HOXC9-203ENST00000508190 ATP10AO60312 1499 aa31.29■■■□□ 2.6
HOXC9-203ENST00000508190 A2MP01023 1474 aa31.29■■■□□ 2.6
HOXC9-203ENST00000508190 REREQ9P2R6 1566 aa31.25■■■□□ 2.59
HOXC9-203ENST00000508190 ANKRD50Q9ULJ7 1429 aa31.24■■■□□ 2.59
HOXC9-203ENST00000508190 SETD5Q9C0A6 1442 aa31.23■■■□□ 2.59
HOXC9-203ENST00000508190 DHX29Q7Z478 1369 aaKnown RBP31.23■■■□□ 2.59
HOXC9-203ENST00000508190 EIF2AK4Q9P2K8 1649 aaKnown RBP31.22■■■□□ 2.59
HOXC9-203ENST00000508190 ERBINQ96RT1 1412 aa31.22■■■□□ 2.59
HOXC9-203ENST00000508190 BCORL1Q5H9F3 1711 aa31.19■■■□□ 2.58
HOXC9-203ENST00000508190 RAB3GAP2Q9H2M9 1393 aa31.17■■■□□ 2.58
HOXC9-203ENST00000508190 AGLP35573 1532 aa31.13■■■□□ 2.57
HOXC9-203ENST00000508190 DEPDC5O75140 1603 aa31.12■■■□□ 2.57
HOXC9-203ENST00000508190 RNF17Q9BXT8 1623 aaKnown RBP31.11■■■□□ 2.57
HOXC9-203ENST00000508190 UNC13BO14795 1591 aa31.1■■■□□ 2.57
HOXC9-203ENST00000508190 MROH1Q8NDA8 1641 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms