RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 CDC42BPBQ9Y5S2 1711 aa34.62■■■■□ 3.13
UBE2D3-214ENST00000503282 APLP2Q06481 763 aa34.61■■■■□ 3.13
UBE2D3-214ENST00000503282 PREX2Q70Z35 1606 aa34.61■■■■□ 3.13
UBE2D3-214ENST00000503282 CCNB3Q8WWL7 1395 aa34.6■■■■□ 3.13
UBE2D3-214ENST00000503282 CDC42BPAQ5VT25 1732 aa34.58■■■■□ 3.13
UBE2D3-214ENST00000503282 MAP3K1Q13233 1512 aa34.57■■■■□ 3.12
UBE2D3-214ENST00000503282 GPATCH8Q9UKJ3 1502 aaKnown RBP34.57■■■■□ 3.12
UBE2D3-214ENST00000503282 FRMPD1Q5SYB0 1578 aa34.56■■■■□ 3.12
UBE2D3-214ENST00000503282 RICTORQ6R327 1708 aa34.55■■■■□ 3.12
UBE2D3-214ENST00000503282 ZNF777Q9ULD5 760 aaPredicted RBP34.54■■■■□ 3.12
UBE2D3-214ENST00000503282 LRRC9Q6ZRR7 1453 aa34.53■■■■□ 3.12
UBE2D3-214ENST00000503282 CFDP1Q9UEE9 299 aaPredicted RBP34.53■■■■□ 3.12
UBE2D3-214ENST00000503282 SUPT6HQ7KZ85 1726 aaKnown RBP34.5■■■■□ 3.11
UBE2D3-214ENST00000503282 POGZQ7Z3K3 1410 aa34.5■■■■□ 3.11
UBE2D3-214ENST00000503282 KANK4Q5T7N3 995 aaPredicted RBP34.49■■■■□ 3.11
UBE2D3-214ENST00000503282 NCOA2Q15596 1464 aa34.47■■■■□ 3.11
UBE2D3-214ENST00000503282 AFAP1Q8N556 730 aa34.44■■■■□ 3.1
UBE2D3-214ENST00000503282 AEBP2Q6ZN18 517 aaPredicted RBP34.43■■■■□ 3.1
UBE2D3-214ENST00000503282 ZNF518AQ6AHZ1 1483 aa34.43■■■■□ 3.1
UBE2D3-214ENST00000503282 ZMYM4Q5VZL5 1548 aa34.43■■■■□ 3.1
UBE2D3-214ENST00000503282 ITSN2Q9NZM3 1697 aa34.41■■■■□ 3.1
UBE2D3-214ENST00000503282 ABCC1P33527 1531 aa34.41■■■■□ 3.1
UBE2D3-214ENST00000503282 MAGI2Q86UL8 1455 aa34.41■■■■□ 3.1
UBE2D3-214ENST00000503282 SAMD9LQ8IVG5 1584 aa34.39■■■■□ 3.1
UBE2D3-214ENST00000503282 KDM4FA0A1W2PPD8 638 aa34.38■■■■□ 3.09
UBE2D3-214ENST00000503282 MYT1LQ9UL68 1186 aa34.38■■■■□ 3.09
UBE2D3-214ENST00000503282 ARHGEF12Q9NZN5 1544 aa34.38■■■■□ 3.09
UBE2D3-214ENST00000503282 HNRNPMP52272 730 aaKnown RBP eCLIP34.36■■■■□ 3.09
UBE2D3-214ENST00000503282 ZFYVE16Q7Z3T8 1539 aa34.35■■■■□ 3.09
UBE2D3-214ENST00000503282 PLEKHH2Q8IVE3 1493 aa34.35■■■■□ 3.09
UBE2D3-214ENST00000503282 TRAPPC8Q9Y2L5 1435 aa34.35■■■■□ 3.09
UBE2D3-214ENST00000503282 ARHGEF40Q8TER5 1519 aa34.34■■■■□ 3.09
UBE2D3-214ENST00000503282 YEATS2Q9ULM3 1422 aa34.32■■■■□ 3.08
UBE2D3-214ENST00000503282 KIAA1107Q9UPP5 1409 aa34.32■■■■□ 3.08
UBE2D3-214ENST00000503282 KDM5CP41229 1560 aa34.32■■■■□ 3.08
UBE2D3-214ENST00000503282 ZNF644Q9H582 1327 aaPredicted RBP34.31■■■■□ 3.08
UBE2D3-214ENST00000503282 ARID4BQ4LE39 1312 aaPredicted RBP34.3■■■■□ 3.08
UBE2D3-214ENST00000503282 SYCP2Q9BX26 1530 aa34.3■■■■□ 3.08
UBE2D3-214ENST00000503282 MLH3Q9UHC1 1453 aa34.25■■■■□ 3.07
UBE2D3-214ENST00000503282 HECW2Q9P2P5 1572 aa34.24■■■■□ 3.07
UBE2D3-214ENST00000503282 ATP10AO60312 1499 aa34.23■■■■□ 3.07
UBE2D3-214ENST00000503282 SPAG9O60271 1321 aaKnown RBP34.21■■■■□ 3.07
UBE2D3-214ENST00000503282 MYOM3Q5VTT5 1437 aa34.2■■■■□ 3.06
UBE2D3-214ENST00000503282 CAMSAP2Q08AD1 1489 aa34.19■■■■□ 3.06
UBE2D3-214ENST00000503282 C9orf84Q5VXU9 1444 aa34.17■■■■□ 3.06
UBE2D3-214ENST00000503282 MBD5Q9P267 1494 aa34.16■■■■□ 3.06
UBE2D3-214ENST00000503282 MIA2Q96PC5 1412 aa34.16■■■■□ 3.06
UBE2D3-214ENST00000503282 RSPH4AQ5TD94 716 aa34.16■■■■□ 3.06
UBE2D3-214ENST00000503282 DIP2CQ9Y2E4 1556 aa34.12■■■■□ 3.05
UBE2D3-214ENST00000503282 KIDINS220Q9ULH0 1771 aa34.12■■■■□ 3.05
UBE2D3-214ENST00000503282 ABCA6Q8N139 1617 aa34.1■■■■□ 3.05
UBE2D3-214ENST00000503282 BCORL1Q5H9F3 1711 aa34.09■■■■□ 3.05
UBE2D3-214ENST00000503282 ATP7AQ04656 1500 aa34.07■■■■□ 3.04
UBE2D3-214ENST00000503282 SIGLEC1Q9BZZ2 1709 aa34.07■■■■□ 3.04
UBE2D3-214ENST00000503282 CCDC141Q6ZP82 1450 aa34.07■■■■□ 3.04
UBE2D3-214ENST00000503282 MLECQ14165 292 aa34.06■■■■□ 3.04
UBE2D3-214ENST00000503282 ADAMTSL3P82987 1691 aa34.04■■■■□ 3.04
UBE2D3-214ENST00000503282 TSPY4P0CV99 314 aa34.04■■■■□ 3.04
UBE2D3-214ENST00000503282 TSPY10P0CW01 314 aa34.04■■■■□ 3.04
UBE2D3-214ENST00000503282 REREQ9P2R6 1566 aa34.02■■■■□ 3.04
UBE2D3-214ENST00000503282 INO80Q9ULG1 1556 aaPredicted RBP34.02■■■■□ 3.04
UBE2D3-214ENST00000503282 ARHGEF5Q12774 1597 aa34.02■■■■□ 3.04
UBE2D3-214ENST00000503282 RTEL1-TNFRSF6BF6WH68 1400 aa34.01■■■■□ 3.03
UBE2D3-214ENST00000503282 FGD6Q6ZV73 1430 aa33.99■■■■□ 3.03
UBE2D3-214ENST00000503282 PTPN23Q9H3S7 1636 aa33.97■■■■□ 3.03
UBE2D3-214ENST00000503282 PPARGC1BQ86YN6 1023 aaKnown RBP33.97■■■■□ 3.03
UBE2D3-214ENST00000503282 MADDQ8WXG6 1647 aa33.94■■■■□ 3.02
UBE2D3-214ENST00000503282 AGLP35573 1532 aa33.94■■■■□ 3.02
UBE2D3-214ENST00000503282 A2MP01023 1474 aa33.93■■■■□ 3.02
UBE2D3-214ENST00000503282 PTPRMP28827 1452 aa33.9■■■■□ 3.02
UBE2D3-214ENST00000503282 TCOF1Q13428 1488 aaKnown RBP33.89■■■■□ 3.02
UBE2D3-214ENST00000503282 ADGBQ8N7X0 1667 aa33.89■■■■□ 3.02
UBE2D3-214ENST00000503282 RIMS1Q86UR5 1692 aaKnown RBP33.86■■■■□ 3.01
UBE2D3-214ENST00000503282 FAM50AQ14320 339 aaKnown RBP33.85■■■■□ 3.01
UBE2D3-214ENST00000503282 ESF1Q9H501 851 aaKnown RBP33.84■■■■□ 3.01
UBE2D3-214ENST00000503282 DHX29Q7Z478 1369 aaKnown RBP33.84■■■■□ 3.01
UBE2D3-214ENST00000503282 FER1L4A9Z1Z3 1794 aa33.83■■■■□ 3.01
UBE2D3-214ENST00000503282 PLXNC1O60486 1568 aa33.82■■■■□ 3
UBE2D3-214ENST00000503282 MAST1Q9Y2H9 1570 aa33.82■■■■□ 3
UBE2D3-214ENST00000503282 ABCC5O15440 1437 aa33.81■■■■□ 3
UBE2D3-214ENST00000503282 PLPPR3Q6T4P5 718 aa33.79■■■■□ 3
UBE2D3-214ENST00000503282 DAPK1P53355 1430 aa33.79■■■■□ 3
UBE2D3-214ENST00000503282 GGT6Q6P531 493 aa33.77■■■■□ 3
UBE2D3-214ENST00000503282 DNMT1P26358 1616 aaKnown RBP33.77■■■■□ 3
UBE2D3-214ENST00000503282 SHANK2Q9UPX8 1470 aa33.75■■■□□ 2.99
UBE2D3-214ENST00000503282 KIF3BO15066 747 aa33.73■■■□□ 2.99
UBE2D3-214ENST00000503282 CROCC2H7BZ55 1655 aa33.73■■■□□ 2.99
UBE2D3-214ENST00000503282 CHIC2Q9UKJ5 165 aa33.71■■■□□ 2.99
UBE2D3-214ENST00000503282 RRP7BPQ9NSQ0 103 aa33.68■■■□□ 2.98
UBE2D3-214ENST00000503282 PPP6R1Q9UPN7 881 aa33.68■■■□□ 2.98
UBE2D3-214ENST00000503282 CEBPAP49715 358 aaPredicted RBP33.67■■■□□ 2.98
UBE2D3-214ENST00000503282 CNTLNQ9NXG0 1405 aa33.67■■■□□ 2.98
UBE2D3-214ENST00000503282 ANKRD30AQ9BXX3 1397 aa33.64■■■□□ 2.98
UBE2D3-214ENST00000503282 KIF15Q9NS87 1388 aa33.64■■■□□ 2.98
UBE2D3-214ENST00000503282 DUOX2Q9NRD8 1548 aa33.63■■■□□ 2.97
UBE2D3-214ENST00000503282 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.58■■■□□ 2.971e-10■■■□□ 14.9
UBE2D3-214ENST00000503282 NCOA1Q15788 1441 aa33.57■■■□□ 2.96
UBE2D3-214ENST00000503282 ZMYM3Q14202 1370 aa33.57■■■□□ 2.96
UBE2D3-214ENST00000503282 CLTCQ00610 1675 aaKnown RBP33.55■■■□□ 2.96
UBE2D3-214ENST00000503282 ITGAEP38570 1179 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms