RNA–Protein interactions for RNA: ENST00000502499.5

MATR3-203, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-203ENST00000502499 C9orf84Q5VXU9 1444 aa12.14□□□□□ -0.47
MATR3-203ENST00000502499 HECW1Q76N89 1606 aa12.12□□□□□ -0.47
MATR3-203ENST00000502499 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
MATR3-203ENST00000502499 TRAPPC8Q9Y2L5 1435 aa12.09□□□□□ -0.47
MATR3-203ENST00000502499 RAPGEF6Q8TEU7 1601 aa12.08□□□□□ -0.48
MATR3-203ENST00000502499 AGLP35573 1532 aa12.08□□□□□ -0.48
MATR3-203ENST00000502499 C3P01024 1663 aa12.07□□□□□ -0.48
MATR3-203ENST00000502499 PLA2R1Q13018 1463 aa12.07□□□□□ -0.48
MATR3-203ENST00000502499 NPATQ14207 1427 aa12.06□□□□□ -0.48
MATR3-203ENST00000502499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.05□□□□□ -0.483e-7■□□□□ 11.1
MATR3-203ENST00000502499 SAMD9Q5K651 1589 aa12.05□□□□□ -0.48
MATR3-203ENST00000502499 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
MATR3-203ENST00000502499 CNTLNQ9NXG0 1405 aa12.04□□□□□ -0.48
MATR3-203ENST00000502499 KDM5CP41229 1560 aa12.02□□□□□ -0.48
MATR3-203ENST00000502499 NUP153P49790 1475 aaKnown RBP12.02□□□□□ -0.48
MATR3-203ENST00000502499 MROH2AA6NES4 1674 aa12.02□□□□□ -0.49
MATR3-203ENST00000502499 ZNF142P52746 1687 aaPredicted RBP12.01□□□□□ -0.49
MATR3-203ENST00000502499 PKD2Q13563 968 aa12.01□□□□□ -0.49
MATR3-203ENST00000502499 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
MATR3-203ENST00000502499 PLCH2O75038 1416 aa12.01□□□□□ -0.49
MATR3-203ENST00000502499 CAMSAP1Q5T5Y3 1602 aa12.01□□□□□ -0.49
MATR3-203ENST00000502499 CPS1P31327 1500 aa12.01□□□□□ -0.49
MATR3-203ENST00000502499 PRXQ9BXM0 1461 aa12□□□□□ -0.49
MATR3-203ENST00000502499 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
MATR3-203ENST00000502499 SCAPERQ9BY12 1400 aa11.99□□□□□ -0.49
MATR3-203ENST00000502499 HSPA1LP34931 641 aa11.98□□□□□ -0.49
MATR3-203ENST00000502499 MLECQ14165 292 aa11.98□□□□□ -0.49
MATR3-203ENST00000502499 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
MATR3-203ENST00000502499 ZNF518AQ6AHZ1 1483 aa11.97□□□□□ -0.49
MATR3-203ENST00000502499 DIP2CQ9Y2E4 1556 aa11.97□□□□□ -0.49
MATR3-203ENST00000502499 MLH3Q9UHC1 1453 aa11.96□□□□□ -0.49
MATR3-203ENST00000502499 PLEKHD1A6NEE1 506 aa11.96□□□□□ -0.5
MATR3-203ENST00000502499 ZNF335Q9H4Z2 1342 aaPredicted RBP11.95□□□□□ -0.5
MATR3-203ENST00000502499 TOM1O60784 492 aa11.95□□□□□ -0.5
MATR3-203ENST00000502499 PTPRKQ15262 1439 aa11.94□□□□□ -0.5
MATR3-203ENST00000502499 PHF23Q9BUL5 403 aaPredicted RBP11.93□□□□□ -0.5
MATR3-203ENST00000502499 ALKQ9UM73 1620 aa11.92□□□□□ -0.5
MATR3-203ENST00000502499 SUPT5HO00267 1087 aaKnown RBP11.9□□□□□ -0.5
MATR3-203ENST00000502499 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
MATR3-203ENST00000502499 ABCA6Q8N139 1617 aa11.89□□□□□ -0.51
MATR3-203ENST00000502499 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
MATR3-203ENST00000502499 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
MATR3-203ENST00000502499 CEP170BQ9Y4F5 1589 aaPredicted RBP11.88□□□□□ -0.51
MATR3-203ENST00000502499 SHANK2Q9UPX8 1470 aa11.87□□□□□ -0.51
MATR3-203ENST00000502499 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
MATR3-203ENST00000502499 RGS17Q9UGC6 210 aaPredicted RBP11.87□□□□□ -0.51
MATR3-203ENST00000502499 PPP6R1Q9UPN7 881 aa11.86□□□□□ -0.51
MATR3-203ENST00000502499 ARID3CA6NKF2 412 aa11.85□□□□□ -0.51
MATR3-203ENST00000502499 SUPT6HQ7KZ85 1726 aaKnown RBP11.84□□□□□ -0.51
MATR3-203ENST00000502499 ZMYM3Q14202 1370 aa11.84□□□□□ -0.51
MATR3-203ENST00000502499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.51
MATR3-203ENST00000502499 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.51
MATR3-203ENST00000502499 ESF1Q9H501 851 aaKnown RBP11.83□□□□□ -0.51
MATR3-203ENST00000502499 VWDEQ8N2E2 1590 aa11.83□□□□□ -0.52
MATR3-203ENST00000502499 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
MATR3-203ENST00000502499 A2ML1A8K2U0 1454 aa11.83□□□□□ -0.52
MATR3-203ENST00000502499 NEURL4Q96JN8 1562 aa11.83□□□□□ -0.52
MATR3-203ENST00000502499 MED14O60244 1454 aa11.81□□□□□ -0.52
MATR3-203ENST00000502499 SYNMO15061 1565 aa11.81□□□□□ -0.52
MATR3-203ENST00000502499 RNF17Q9BXT8 1623 aaKnown RBP11.81□□□□□ -0.52
MATR3-203ENST00000502499 KIDINS220Q9ULH0 1771 aa11.8□□□□□ -0.52
MATR3-203ENST00000502499 DEPDC5O75140 1603 aa11.8□□□□□ -0.52
MATR3-203ENST00000502499 DNMT1P26358 1616 aaKnown RBP11.8□□□□□ -0.52
MATR3-203ENST00000502499 PIP4K2BP78356 416 aa11.78□□□□□ -0.52
MATR3-203ENST00000502499 ABCC1P33527 1531 aa11.78□□□□□ -0.52
MATR3-203ENST00000502499 P3H3Q8IVL6 736 aa11.78□□□□□ -0.52
MATR3-203ENST00000502499 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
MATR3-203ENST00000502499 FAM135AQ9P2D6 1515 aa11.77□□□□□ -0.53
MATR3-203ENST00000502499 AFAP1Q8N556 730 aa11.77□□□□□ -0.53
MATR3-203ENST00000502499 PLXNC1O60486 1568 aa11.76□□□□□ -0.53
MATR3-203ENST00000502499 KIF14Q15058 1648 aa11.76□□□□□ -0.53
MATR3-203ENST00000502499 ARHGAP5Q13017 1502 aa11.75□□□□□ -0.53
MATR3-203ENST00000502499 CLTCQ00610 1675 aaKnown RBP11.74□□□□□ -0.53
MATR3-203ENST00000502499 SCAF1Q9H7N4 1312 aaKnown RBP11.74□□□□□ -0.53
MATR3-203ENST00000502499 CDC42BPBQ9Y5S2 1711 aa11.74□□□□□ -0.53
MATR3-203ENST00000502499 LRRC7Q96NW7 1537 aa11.73□□□□□ -0.53
MATR3-203ENST00000502499 POTEAQ6S8J7 498 aa11.73□□□□□ -0.53
MATR3-203ENST00000502499 PREX2Q70Z35 1606 aa11.72□□□□□ -0.53
MATR3-203ENST00000502499 TROQ12816 1431 aaPredicted RBP11.72□□□□□ -0.53
MATR3-203ENST00000502499 CDK13Q14004 1512 aaKnown RBP11.72□□□□□ -0.53
MATR3-203ENST00000502499 FAM135BQ49AJ0 1406 aa11.71□□□□□ -0.53
MATR3-203ENST00000502499 CDK11AQ9UQ88 783 aaPredicted RBP11.71□□□□□ -0.54
MATR3-203ENST00000502499 SAMD9LQ8IVG5 1584 aa11.7□□□□□ -0.54
MATR3-203ENST00000502499 NPHP4O75161 1426 aaPredicted RBP11.68□□□□□ -0.54
MATR3-203ENST00000502499 STRCP1A6NGW2 1772 aa11.68□□□□□ -0.54
MATR3-203ENST00000502499 CLIP1P30622 1438 aa11.68□□□□□ -0.54
MATR3-203ENST00000502499 IQGAP1P46940 1657 aa11.67□□□□□ -0.54
MATR3-203ENST00000502499 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
MATR3-203ENST00000502499 INO80Q9ULG1 1556 aaPredicted RBP11.66□□□□□ -0.54
MATR3-203ENST00000502499 ANKLE2Q86XL3 938 aa11.66□□□□□ -0.54
MATR3-203ENST00000502499 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.54
MATR3-203ENST00000502499 CDK12Q9NYV4 1490 aaPredicted RBP11.66□□□□□ -0.54
MATR3-203ENST00000502499 SETD1AO15047 1707 aaKnown RBP11.65□□□□□ -0.54
MATR3-203ENST00000502499 A2MP01023 1474 aa11.65□□□□□ -0.54
MATR3-203ENST00000502499 KDM5DQ9BY66 1539 aa11.64□□□□□ -0.55
MATR3-203ENST00000502499 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
MATR3-203ENST00000502499 PZPP20742 1482 aa11.64□□□□□ -0.55
MATR3-203ENST00000502499 KIAA1107Q9UPP5 1409 aa11.64□□□□□ -0.55
MATR3-203ENST00000502499 ADGBQ8N7X0 1667 aa11.63□□□□□ -0.55
MATR3-203ENST00000502499 TNRQ92752 1358 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms