RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	34	■■■■□ 3.03	6e-8	■□□□□ 11.2
RAP1B-213	ENST00000501412	PLCH2	O75038	1416 aa		34	■■■■□ 3.03
RAP1B-213	ENST00000501412	ARAP3	Q8WWN8	1544 aa		33.98	■■■■□ 3.03
RAP1B-213	ENST00000501412	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.97	■■■■□ 3.03
RAP1B-213	ENST00000501412	MAP3K4	Q9Y6R4	1608 aa		33.92	■■■■□ 3.02
RAP1B-213	ENST00000501412	ARHGAP5	Q13017	1502 aa		33.91	■■■■□ 3.02
RAP1B-213	ENST00000501412	CAMSAP2	Q08AD1	1489 aa		33.9	■■■■□ 3.02
RAP1B-213	ENST00000501412	ZNF644	Q9H582	1327 aa	Predicted RBP	33.9	■■■■□ 3.02
RAP1B-213	ENST00000501412	CD109	Q6YHK3	1445 aa		33.89	■■■■□ 3.02
RAP1B-213	ENST00000501412	PCGF6	Q9BYE7	350 aa		33.88	■■■■□ 3.01
RAP1B-213	ENST00000501412	SAMD9L	Q8IVG5	1584 aa		33.88	■■■■□ 3.01
RAP1B-213	ENST00000501412	FAM50A	Q14320	339 aa	Known RBP	33.88	■■■■□ 3.01
RAP1B-213	ENST00000501412	FAM69C	Q0P6D2	419 aa		33.85	■■■■□ 3.01
RAP1B-213	ENST00000501412	EFCAB2	Q5VUJ9	269 aa		33.81	■■■■□ 3
RAP1B-213	ENST00000501412	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.81	■■■■□ 3
RAP1B-213	ENST00000501412	FANCA	O15360	1455 aa		33.8	■■■■□ 3
RAP1B-213	ENST00000501412	DNMT1	P26358	1616 aa	Known RBP	33.76	■■■■□ 3
RAP1B-213	ENST00000501412	MBD5	Q9P267	1494 aa		33.76	■■■□□ 2.99
RAP1B-213	ENST00000501412	KIAA1107	Q9UPP5	1409 aa		33.75	■■■□□ 2.99
RAP1B-213	ENST00000501412	ABCC1	P33527	1531 aa		33.75	■■■□□ 2.99
RAP1B-213	ENST00000501412	PPRC1	Q5VV67	1664 aa	Known RBP	33.75	■■■□□ 2.99
RAP1B-213	ENST00000501412	PLEKHH2	Q8IVE3	1493 aa		33.74	■■■□□ 2.99
RAP1B-213	ENST00000501412	PTPRK	Q15262	1439 aa		33.74	■■■□□ 2.99
RAP1B-213	ENST00000501412	CFAP74	Q9C0B2	1584 aa		33.73	■■■□□ 2.99
RAP1B-213	ENST00000501412	ARHGEF5	Q12774	1597 aa		33.72	■■■□□ 2.99
RAP1B-213	ENST00000501412	SYCP2	Q9BX26	1530 aa		33.72	■■■□□ 2.99
RAP1B-213	ENST00000501412	ARHGEF12	Q9NZN5	1544 aa		33.72	■■■□□ 2.99
RAP1B-213	ENST00000501412	ABCC5	O15440	1437 aa		33.71	■■■□□ 2.99
RAP1B-213	ENST00000501412	DAPK1	P53355	1430 aa		33.71	■■■□□ 2.99
RAP1B-213	ENST00000501412	NEO1	Q92859	1461 aa		33.69	■■■□□ 2.98
RAP1B-213	ENST00000501412	AKNA	Q7Z591	1439 aa		33.68	■■■□□ 2.98
RAP1B-213	ENST00000501412	ITGAE	P38570	1179 aa		33.67	■■■□□ 2.98
RAP1B-213	ENST00000501412	TSPOAP1	O95153	1857 aa		33.66	■■■□□ 2.98
RAP1B-213	ENST00000501412	CROCC2	H7BZ55	1655 aa		33.66	■■■□□ 2.98
RAP1B-213	ENST00000501412	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.66	■■■□□ 2.98
RAP1B-213	ENST00000501412	ADGRL1	O94910	1474 aa		33.64	■■■□□ 2.98
RAP1B-213	ENST00000501412	CCDC141	Q6ZP82	1450 aa		33.62	■■■□□ 2.97
RAP1B-213	ENST00000501412	RSPH4A	Q5TD94	716 aa		33.6	■■■□□ 2.97
RAP1B-213	ENST00000501412	TEX14	Q8IWB6	1497 aa		33.59	■■■□□ 2.97
RAP1B-213	ENST00000501412	SHANK2	Q9UPX8	1470 aa		33.59	■■■□□ 2.97
RAP1B-213	ENST00000501412	TRAPPC8	Q9Y2L5	1435 aa		33.59	■■■□□ 2.97
RAP1B-213	ENST00000501412	SCAPER	Q9BY12	1400 aa		33.58	■■■□□ 2.97
RAP1B-213	ENST00000501412	MAST1	Q9Y2H9	1570 aa		33.53	■■■□□ 2.96
RAP1B-213	ENST00000501412	ADGRL2	O95490	1459 aa		33.52	■■■□□ 2.96
RAP1B-213	ENST00000501412	ROCK1	Q13464	1354 aa		33.51	■■■□□ 2.96
RAP1B-213	ENST00000501412	C9orf84	Q5VXU9	1444 aa		33.51	■■■□□ 2.96
RAP1B-213	ENST00000501412	ADGB	Q8N7X0	1667 aa		33.5	■■■□□ 2.95
RAP1B-213	ENST00000501412	POGZ	Q7Z3K3	1410 aa		33.49	■■■□□ 2.95
RAP1B-213	ENST00000501412	CHIC2	Q9UKJ5	165 aa		33.49	■■■□□ 2.95
RAP1B-213	ENST00000501412	AFAP1	Q8N556	730 aa		33.47	■■■□□ 2.95
RAP1B-213	ENST00000501412	HFM1	A2PYH4	1435 aa		33.47	■■■□□ 2.95
RAP1B-213	ENST00000501412	ZNF518A	Q6AHZ1	1483 aa		33.46	■■■□□ 2.95
RAP1B-213	ENST00000501412	NCOA1	Q15788	1441 aa		33.46	■■■□□ 2.95
RAP1B-213	ENST00000501412	KDM5C	P41229	1560 aa		33.46	■■■□□ 2.95
RAP1B-213	ENST00000501412	TSPY4	P0CV99	314 aa		33.45	■■■□□ 2.95
RAP1B-213	ENST00000501412	TSPY10	P0CW01	314 aa		33.45	■■■□□ 2.95
RAP1B-213	ENST00000501412	DENND4B	O75064	1496 aa	Predicted RBP	33.45	■■■□□ 2.95
RAP1B-213	ENST00000501412	KDM6B	O15054	1643 aa		33.44	■■■□□ 2.94
RAP1B-213	ENST00000501412	NAIP	Q13075	1403 aa		33.43	■■■□□ 2.94
RAP1B-213	ENST00000501412	RICTOR	Q6R327	1708 aa		33.43	■■■□□ 2.94
RAP1B-213	ENST00000501412	FRMPD1	Q5SYB0	1578 aa		33.41	■■■□□ 2.94
RAP1B-213	ENST00000501412	INO80	Q9ULG1	1556 aa	Predicted RBP	33.41	■■■□□ 2.94
RAP1B-213	ENST00000501412	GCC2	Q8IWJ2	1684 aa		33.41	■■■□□ 2.94
RAP1B-213	ENST00000501412	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.4	■■■□□ 2.94
RAP1B-213	ENST00000501412	ZFYVE16	Q7Z3T8	1539 aa		33.4	■■■□□ 2.94
RAP1B-213	ENST00000501412	SETD5	Q9C0A6	1442 aa		33.39	■■■□□ 2.94
RAP1B-213	ENST00000501412	PLXNC1	O60486	1568 aa		33.39	■■■□□ 2.93
RAP1B-213	ENST00000501412	ANKRD30A	Q9BXX3	1397 aa		33.38	■■■□□ 2.93
RAP1B-213	ENST00000501412	RRP7BP	Q9NSQ0	103 aa		33.38	■■■□□ 2.93
RAP1B-213	ENST00000501412	SPAG9	O60271	1321 aa	Known RBP	33.36	■■■□□ 2.93
RAP1B-213	ENST00000501412	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.36	■■■□□ 2.93
RAP1B-213	ENST00000501412	RAPGEF3	O95398	923 aa		33.35	■■■□□ 2.93
RAP1B-213	ENST00000501412	ATP7A	Q04656	1500 aa		33.35	■■■□□ 2.93
RAP1B-213	ENST00000501412	MLH3	Q9UHC1	1453 aa		33.33	■■■□□ 2.93
RAP1B-213	ENST00000501412	KIDINS220	Q9ULH0	1771 aa		33.33	■■■□□ 2.93
RAP1B-213	ENST00000501412	RAB3GAP2	Q9H2M9	1393 aa		33.32	■■■□□ 2.92
RAP1B-213	ENST00000501412	ZMYM4	Q5VZL5	1548 aa		33.31	■■■□□ 2.92
RAP1B-213	ENST00000501412	HECW2	Q9P2P5	1572 aa		33.31	■■■□□ 2.92
RAP1B-213	ENST00000501412	KIF15	Q9NS87	1388 aa		33.3	■■■□□ 2.92
RAP1B-213	ENST00000501412	HRC	P23327	699 aa		33.25	■■■□□ 2.91
RAP1B-213	ENST00000501412	DUOX2	Q9NRD8	1548 aa		33.22	■■■□□ 2.91
RAP1B-213	ENST00000501412	ANKRD50	Q9ULJ7	1429 aa		33.21	■■■□□ 2.91
RAP1B-213	ENST00000501412	ABCA6	Q8N139	1617 aa		33.19	■■■□□ 2.9
RAP1B-213	ENST00000501412	MAGI2	Q86UL8	1455 aa		33.18	■■■□□ 2.9
RAP1B-213	ENST00000501412	DIP2C	Q9Y2E4	1556 aa		33.15	■■■□□ 2.9
RAP1B-213	ENST00000501412	YEATS2	Q9ULM3	1422 aa		33.15	■■■□□ 2.9
RAP1B-213	ENST00000501412	ERBIN	Q96RT1	1412 aa		33.14	■■■□□ 2.9
RAP1B-213	ENST00000501412	MYT1L	Q9UL68	1186 aa		33.11	■■■□□ 2.89
RAP1B-213	ENST00000501412	DHX29	Q7Z478	1369 aa	Known RBP	33.1	■■■□□ 2.89
RAP1B-213	ENST00000501412	A2M	P01023	1474 aa		33.09	■■■□□ 2.89
RAP1B-213	ENST00000501412	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.08	■■■□□ 2.89
RAP1B-213	ENST00000501412	ARHGEF40	Q8TER5	1519 aa		33.05	■■■□□ 2.88
RAP1B-213	ENST00000501412	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.04	■■■□□ 2.88
RAP1B-213	ENST00000501412	RERE	Q9P2R6	1566 aa		33.01	■■■□□ 2.88
RAP1B-213	ENST00000501412	ACIN1	Q9UKV3	1341 aa	Known RBP	33.01	■■■□□ 2.88
RAP1B-213	ENST00000501412	UNC13B	O14795	1591 aa		33.01	■■■□□ 2.87
RAP1B-213	ENST00000501412	DHX57	Q6P158	1386 aa	Known RBP	33.01	■■■□□ 2.87
RAP1B-213	ENST00000501412	ATP10A	O60312	1499 aa		33	■■■□□ 2.87
RAP1B-213	ENST00000501412	BCORL1	Q5H9F3	1711 aa		33	■■■□□ 2.87
RAP1B-213	ENST00000501412	KDM5D	Q9BY66	1539 aa		32.97	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms