RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-213ENST00000501412 NISCHQ9Y2I1 1504 aa52.2■■■■■ 5.95
RAP1B-213ENST00000501412 CCDC180Q9P1Z9 1646 aa45.9■■■■■ 4.94
RAP1B-213ENST00000501412 ABCC9O60706 1549 aa43.89■■■■■ 4.62
RAP1B-213ENST00000501412 ZCCHC6Q5VYS8 1495 aaKnown RBP43.73■■■■■ 4.59
RAP1B-213ENST00000501412 DCAF1Q9Y4B6 1507 aa43.25■■■■■ 4.51
RAP1B-213ENST00000501412 DCAF8L2P0C7V8 631 aa43.05■■■■■ 4.48
RAP1B-213ENST00000501412 MYO15BQ96JP2 1530 aa43.02■■■■■ 4.48
RAP1B-213ENST00000501412 NACADO15069 1562 aa42.9■■■■■ 4.46
RAP1B-213ENST00000501412 RB1CC1Q8TDY2 1594 aa42.65■■■■■ 4.42
RAP1B-213ENST00000501412 SCRIBQ14160 1630 aa41.98■■■■■ 4.31
RAP1B-213ENST00000501412 SHROOM4Q9ULL8 1493 aa41.87■■■■■ 4.29
RAP1B-213ENST00000501412 UNC13AQ9UPW8 1703 aa41.8■■■■■ 4.28
RAP1B-213ENST00000501412 BICRAQ9NZM4 1560 aa41.44■■■■■ 4.22
RAP1B-213ENST00000501412 PABPN1Q86U42 306 aaKnown RBP eCLIP41.19■■■■■ 4.18
RAP1B-213ENST00000501412 DNAJC5BQ9UF47 199 aa40.64■■■■■ 4.1
RAP1B-213ENST00000501412 CECR2Q9BXF3 1484 aa40.58■■■■■ 4.09
RAP1B-213ENST00000501412 BAZ1AQ9NRL2 1556 aaPredicted RBP40.35■■■■■ 4.05
RAP1B-213ENST00000501412 SMARCA4P51532 1647 aa40.28■■■■■ 4.04
RAP1B-213ENST00000501412 MROH2BQ7Z745 1585 aa40.28■■■■■ 4.04
RAP1B-213ENST00000501412 RSF1Q96T23 1441 aaPredicted RBP40.2■■■■■ 4.03
RAP1B-213ENST00000501412 EIF4G1Q04637 1599 aaKnown RBP40.2■■■■■ 4.03
RAP1B-213ENST00000501412 SUPT5HO00267 1087 aaKnown RBP39.9■■■■□ 3.98
RAP1B-213ENST00000501412 WIZO95785 1651 aa39.89■■■■□ 3.98
RAP1B-213ENST00000501412 PEG3Q9GZU2 1588 aa39.89■■■■□ 3.98
RAP1B-213ENST00000501412 ATAD2BQ9ULI0 1458 aa39.79■■■■□ 3.96
RAP1B-213ENST00000501412 CC2D2AQ9P2K1 1620 aa39.76■■■■□ 3.96
RAP1B-213ENST00000501412 SMARCA2P51531 1590 aa39.75■■■■□ 3.95
RAP1B-213ENST00000501412 NCAPD3P42695 1498 aa39.59■■■■□ 3.93
RAP1B-213ENST00000501412 TOP2AP11388 1531 aaKnown RBP39.5■■■■□ 3.91
RAP1B-213ENST00000501412 HMGXB3Q12766 1538 aa39.5■■■■□ 3.91
RAP1B-213ENST00000501412 BAZ1BQ9UIG0 1483 aaKnown RBP39.47■■■■□ 3.91
RAP1B-213ENST00000501412 CCDC88BA6NC98 1476 aa39.06■■■■□ 3.84
RAP1B-213ENST00000501412 CFTRP13569 1480 aa38.51■■■■□ 3.76
RAP1B-213ENST00000501412 CADPSQ9ULU8 1353 aa38.48■■■■□ 3.75
RAP1B-213ENST00000501412 LAMC3Q9Y6N6 1575 aa38.35■■■■□ 3.73
RAP1B-213ENST00000501412 NESP48681 1621 aa38.34■■■■□ 3.73
RAP1B-213ENST00000501412 PRDM2Q13029 1718 aa38.28■■■■□ 3.72
RAP1B-213ENST00000501412 FANCD2Q9BXW9 1451 aa38.03■■■■□ 3.68
RAP1B-213ENST00000501412 PDS5BQ9NTI5 1447 aa38.01■■■■□ 3.68
RAP1B-213ENST00000501412 ABCC8Q09428 1581 aa37.96■■■■□ 3.67
RAP1B-213ENST00000501412 CHIC1Q5VXU3 224 aa37.95■■■■□ 3.67
RAP1B-213ENST00000501412 KIF21AQ7Z4S6 1674 aa37.9■■■■□ 3.66
RAP1B-213ENST00000501412 CEP164Q9UPV0 1460 aa37.86■■■■□ 3.65
RAP1B-213ENST00000501412 ERCC6Q03468 1493 aa37.85■■■■□ 3.65
RAP1B-213ENST00000501412 WRNQ14191 1432 aaPredicted RBP eCLIP37.82■■■■□ 3.64
RAP1B-213ENST00000501412 SYNJ1O43426 1573 aa37.73■■■■□ 3.63
RAP1B-213ENST00000501412 CUX1P39880 1505 aa37.72■■■■□ 3.63
RAP1B-213ENST00000501412 TOP2BQ02880 1626 aa37.66■■■■□ 3.62
RAP1B-213ENST00000501412 BIVM-ERCC5R4GMW8 1640 aa37.65■■■■□ 3.62
RAP1B-213ENST00000501412 URB2Q14146 1524 aaKnown RBP37.63■■■■□ 3.61
RAP1B-213ENST00000501412 TRIM41Q8WV44 630 aa37.61■■■■□ 3.61
RAP1B-213ENST00000501412 DNMBPQ6XZF7 1577 aa37.61■■■■□ 3.61
RAP1B-213ENST00000501412 CUX2O14529 1486 aa37.6■■■■□ 3.61
RAP1B-213ENST00000501412 MRC2Q9UBG0 1479 aa37.59■■■■□ 3.61
RAP1B-213ENST00000501412 TOPBP1Q92547 1522 aa37.57■■■■□ 3.61
RAP1B-213ENST00000501412 THOC2Q8NI27 1593 aaKnown RBP37.53■■■■□ 3.6
RAP1B-213ENST00000501412 WDR62O43379 1518 aa37.47■■■■□ 3.59
RAP1B-213ENST00000501412 FGD5Q6ZNL6 1462 aa37.38■■■■□ 3.57
RAP1B-213ENST00000501412 POLA1P09884 1462 aaPredicted RBP37.33■■■■□ 3.57
RAP1B-213ENST00000501412 RAD54L2Q9Y4B4 1467 aa37.16■■■■□ 3.54
RAP1B-213ENST00000501412 SOGA1O94964 1423 aa37.15■■■■□ 3.54
RAP1B-213ENST00000501412 TARBP1Q13395 1621 aaKnown RBP37.11■■■■□ 3.53
RAP1B-213ENST00000501412 ABCA10Q8WWZ4 1543 aa37.09■■■■□ 3.53
RAP1B-213ENST00000501412 WDR97A6NE52 1622 aa37.07■■■■□ 3.53
RAP1B-213ENST00000501412 IFT140Q96RY7 1462 aa37.02■■■■□ 3.52
RAP1B-213ENST00000501412 RUSC2Q8N2Y8 1516 aa37.02■■■■□ 3.52
RAP1B-213ENST00000501412 EEA1Q15075 1411 aa36.93■■■■□ 3.5
RAP1B-213ENST00000501412 KIF27Q86VH2 1401 aa36.92■■■■□ 3.5
RAP1B-213ENST00000501412 DNAJC5Q9H3Z4 198 aa36.91■■■■□ 3.5
RAP1B-213ENST00000501412 ABCA5Q8WWZ7 1642 aa36.86■■■■□ 3.49
RAP1B-213ENST00000501412 FAM9AQ8IZU1 332 aaPredicted RBP36.83■■■■□ 3.49
RAP1B-213ENST00000501412 TDRD9Q8NDG6 1382 aaKnown RBP36.83■■■■□ 3.49
RAP1B-213ENST00000501412 ZNF608Q9ULD9 1512 aaPredicted RBP36.83■■■■□ 3.49
RAP1B-213ENST00000501412 GAPVD1Q14C86 1478 aa36.75■■■■□ 3.47
RAP1B-213ENST00000501412 AQRO60306 1485 aaKnown RBP eCLIP36.74■■■■□ 3.471e-6■■■■□ 26.1
RAP1B-213ENST00000501412 CSRNP3Q8WYN3 585 aa36.73■■■■□ 3.47
RAP1B-213ENST00000501412 EIF4G3O43432 1585 aaKnown RBP36.71■■■■□ 3.47
RAP1B-213ENST00000501412 IGF1RP08069 1367 aa36.7■■■■□ 3.47
RAP1B-213ENST00000501412 ERICH3Q5RHP9 1530 aa36.64■■■■□ 3.46
RAP1B-213ENST00000501412 PBRM1Q86U86 1689 aa36.62■■■■□ 3.45
RAP1B-213ENST00000501412 GRIN2BQ13224 1484 aa36.59■■■■□ 3.45
RAP1B-213ENST00000501412 PRXQ9BXM0 1461 aa36.56■■■■□ 3.44
RAP1B-213ENST00000501412 KIF21BO75037 1637 aa36.52■■■■□ 3.44
RAP1B-213ENST00000501412 CUL7Q14999 1698 aa36.5■■■■□ 3.43
RAP1B-213ENST00000501412 CARMIL1Q5VZK9 1371 aa36.47■■■■□ 3.43
RAP1B-213ENST00000501412 ADAMTS12P58397 1594 aa36.42■■■■□ 3.42
RAP1B-213ENST00000501412 SNAPC4Q5SXM2 1469 aa36.41■■■■□ 3.42
RAP1B-213ENST00000501412 RAPGEF2Q9Y4G8 1499 aa36.4■■■■□ 3.42
RAP1B-213ENST00000501412 LOC105371045A0A1W2PR82 267 aa36.39■■■■□ 3.42
RAP1B-213ENST00000501412 MAGI1Q96QZ7 1491 aaPredicted RBP36.39■■■■□ 3.42
RAP1B-213ENST00000501412 FHAD1B1AJZ9 1412 aa36.36■■■■□ 3.41
RAP1B-213ENST00000501412 GOLGA3Q08378 1498 aa36.35■■■■□ 3.41
RAP1B-213ENST00000501412 EHMT2Q96KQ7 1210 aa36.25■■■■□ 3.39
RAP1B-213ENST00000501412 SYNJ2O15056 1496 aa36.23■■■■□ 3.39
RAP1B-213ENST00000501412 GRIN2AQ12879 1464 aa36.14■■■■□ 3.38
RAP1B-213ENST00000501412 TNIKQ9UKE5 1360 aa36.12■■■■□ 3.37
RAP1B-213ENST00000501412 UBTFP17480 764 aaKnown RBP36.1■■■■□ 3.37
RAP1B-213ENST00000501412 CHMP7Q8WUX9 453 aaPredicted RBP36.07■■■■□ 3.37
RAP1B-213ENST00000501412 CHD1O14646 1710 aa36.04■■■■□ 3.36
RAP1B-213ENST00000501412 FBLN2P98095 1184 aa35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms