RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 IQGAP2Q13576 1575 aa22.73■■□□□ 1.23
ZCCHC3-201ENST00000500893 PKD2Q13563 968 aa22.73■■□□□ 1.23
ZCCHC3-201ENST00000500893 PRKRIP1Q9H875 184 aaPredicted RBP22.71■■□□□ 1.23
ZCCHC3-201ENST00000500893 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.22
ZCCHC3-201ENST00000500893 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
ZCCHC3-201ENST00000500893 HECW1Q76N89 1606 aa22.68■■□□□ 1.22
ZCCHC3-201ENST00000500893 B4GALNT3Q6L9W6 998 aa22.66■■□□□ 1.22
ZCCHC3-201ENST00000500893 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
ZCCHC3-201ENST00000500893 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
ZCCHC3-201ENST00000500893 CCDC7Q96M83 1385 aa22.66■■□□□ 1.22
ZCCHC3-201ENST00000500893 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
ZCCHC3-201ENST00000500893 DAPK1P53355 1430 aa22.65■■□□□ 1.22
ZCCHC3-201ENST00000500893 PLEKHD1A6NEE1 506 aa22.64■■□□□ 1.21
ZCCHC3-201ENST00000500893 DENND4BO75064 1496 aaPredicted RBP22.64■■□□□ 1.21
ZCCHC3-201ENST00000500893 ABCC5O15440 1437 aa22.63■■□□□ 1.21
ZCCHC3-201ENST00000500893 TARBP1Q13395 1621 aaKnown RBP22.63■■□□□ 1.21
ZCCHC3-201ENST00000500893 JPH4Q96JJ6 628 aa22.63■■□□□ 1.21
ZCCHC3-201ENST00000500893 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
ZCCHC3-201ENST00000500893 MIA2Q96PC5 1412 aa22.62■■□□□ 1.21
ZCCHC3-201ENST00000500893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.62■■□□□ 1.212e-11■■□□□ 11.4
ZCCHC3-201ENST00000500893 ANKRD30BQ9BXX2 1392 aa22.61■■□□□ 1.21
ZCCHC3-201ENST00000500893 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
ZCCHC3-201ENST00000500893 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
ZCCHC3-201ENST00000500893 TSPY4P0CV99 314 aa22.6■■□□□ 1.21
ZCCHC3-201ENST00000500893 TSPY10P0CW01 314 aa22.6■■□□□ 1.21
ZCCHC3-201ENST00000500893 ERICH6Q7L0X2 663 aa22.59■■□□□ 1.21
ZCCHC3-201ENST00000500893 HNRNPMP52272 730 aaKnown RBP eCLIP22.59■■□□□ 1.21
ZCCHC3-201ENST00000500893 PLB1Q6P1J6 1458 aa22.58■■□□□ 1.21
ZCCHC3-201ENST00000500893 CARD11Q9BXL7 1154 aa22.58■■□□□ 1.2
ZCCHC3-201ENST00000500893 TCOF1Q13428 1488 aaKnown RBP22.57■■□□□ 1.2
ZCCHC3-201ENST00000500893 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
ZCCHC3-201ENST00000500893 DCAF11Q8TEB1 546 aa22.56■■□□□ 1.2
ZCCHC3-201ENST00000500893 NUP155O75694 1391 aa22.56■■□□□ 1.2
ZCCHC3-201ENST00000500893 WDR62O43379 1518 aa22.55■■□□□ 1.2
ZCCHC3-201ENST00000500893 NUP153P49790 1475 aaKnown RBP22.55■■□□□ 1.2
ZCCHC3-201ENST00000500893 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
ZCCHC3-201ENST00000500893 ARHGEF11O15085 1522 aa22.54■■□□□ 1.2
ZCCHC3-201ENST00000500893 TMC1Q8TDI8 760 aa22.53■■□□□ 1.2
ZCCHC3-201ENST00000500893 KIAA0586Q9BVV6 1533 aa22.52■■□□□ 1.2
ZCCHC3-201ENST00000500893 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
ZCCHC3-201ENST00000500893 USP47Q96K76 1375 aa22.49■■□□□ 1.19
ZCCHC3-201ENST00000500893 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
ZCCHC3-201ENST00000500893 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
ZCCHC3-201ENST00000500893 RPRD2Q5VT52 1461 aaKnown RBP22.48■■□□□ 1.19
ZCCHC3-201ENST00000500893 NCOA1Q15788 1441 aa22.48■■□□□ 1.19
ZCCHC3-201ENST00000500893 PPP4R2Q9NY27 417 aa22.48■■□□□ 1.19
ZCCHC3-201ENST00000500893 ANKRD30AQ9BXX3 1397 aa22.47■■□□□ 1.19
ZCCHC3-201ENST00000500893 ST20-MTHFSA0A0A6YYL1 179 aa22.47■■□□□ 1.19
ZCCHC3-201ENST00000500893 GRIN2AQ12879 1464 aa22.46■■□□□ 1.19
ZCCHC3-201ENST00000500893 ROCK1Q13464 1354 aa22.45■■□□□ 1.18
ZCCHC3-201ENST00000500893 TROQ12816 1431 aaPredicted RBP22.45■■□□□ 1.18
ZCCHC3-201ENST00000500893 AKNAQ7Z591 1439 aa22.44■■□□□ 1.18
ZCCHC3-201ENST00000500893 CAMSAP2Q08AD1 1489 aa22.43■■□□□ 1.18
ZCCHC3-201ENST00000500893 CARMIL2Q6F5E8 1435 aa22.42■■□□□ 1.18
ZCCHC3-201ENST00000500893 ANKRD50Q9ULJ7 1429 aa22.42■■□□□ 1.18
ZCCHC3-201ENST00000500893 ZBED9Q6R2W3 1325 aa22.41■■□□□ 1.18
ZCCHC3-201ENST00000500893 GCC2Q8IWJ2 1684 aa22.41■■□□□ 1.18
ZCCHC3-201ENST00000500893 KIAA0556O60303 1618 aa22.4■■□□□ 1.18
ZCCHC3-201ENST00000500893 GPATCH8Q9UKJ3 1502 aaKnown RBP22.38■■□□□ 1.17
ZCCHC3-201ENST00000500893 TEX14Q8IWB6 1497 aa22.37■■□□□ 1.17
ZCCHC3-201ENST00000500893 CCDC136Q96JN2 1154 aa22.37■■□□□ 1.17
ZCCHC3-201ENST00000500893 MSH5O43196 834 aa22.37■■□□□ 1.17
ZCCHC3-201ENST00000500893 KIAA1107Q9UPP5 1409 aa22.36■■□□□ 1.17
ZCCHC3-201ENST00000500893 RAPGEF6Q8TEU7 1601 aa22.36■■□□□ 1.17
ZCCHC3-201ENST00000500893 MYT1LQ9UL68 1186 aa22.35■■□□□ 1.17
ZCCHC3-201ENST00000500893 PZPP20742 1482 aa22.35■■□□□ 1.17
ZCCHC3-201ENST00000500893 CC2D1BQ5T0F9 858 aaKnown RBP22.32■■□□□ 1.16
ZCCHC3-201ENST00000500893 DNMT1P26358 1616 aaKnown RBP22.31■■□□□ 1.16
ZCCHC3-201ENST00000500893 KIF15Q9NS87 1388 aa22.31■■□□□ 1.16
ZCCHC3-201ENST00000500893 KIF14Q15058 1648 aa22.3■■□□□ 1.16
ZCCHC3-201ENST00000500893 ROCK2O75116 1388 aaKnown RBP22.3■■□□□ 1.16
ZCCHC3-201ENST00000500893 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
ZCCHC3-201ENST00000500893 NBPF1Q3BBV0 1214 aa22.29■■□□□ 1.16
ZCCHC3-201ENST00000500893 C9orf84Q5VXU9 1444 aa22.29■■□□□ 1.16
ZCCHC3-201ENST00000500893 SPATA31E1Q6ZUB1 1445 aa22.28■■□□□ 1.16
ZCCHC3-201ENST00000500893 NUDCQ9Y266 331 aa22.27■■□□□ 1.16
ZCCHC3-201ENST00000500893 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
ZCCHC3-201ENST00000500893 PTPRGP23470 1445 aa22.24■■□□□ 1.15
ZCCHC3-201ENST00000500893 PNISRQ8TF01 805 aaKnown RBP22.23■■□□□ 1.15
ZCCHC3-201ENST00000500893 DHX29Q7Z478 1369 aaKnown RBP22.22■■□□□ 1.15
ZCCHC3-201ENST00000500893 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
ZCCHC3-201ENST00000500893 NPM2Q86SE8 214 aaKnown RBP22.21■■□□□ 1.15
ZCCHC3-201ENST00000500893 ATP10BO94823 1461 aa22.2■■□□□ 1.14
ZCCHC3-201ENST00000500893 NBR1Q14596 966 aa22.19■■□□□ 1.14
ZCCHC3-201ENST00000500893 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
ZCCHC3-201ENST00000500893 ERICH6BQ5W0A0 696 aa22.18■■□□□ 1.14
ZCCHC3-201ENST00000500893 CCDC144AA2RUR9 1427 aa22.14■■□□□ 1.13
ZCCHC3-201ENST00000500893 MYBBP1AQ9BQG0 1328 aaKnown RBP22.12■■□□□ 1.13
ZCCHC3-201ENST00000500893 CDCA7LQ96GN5 454 aa22.12■■□□□ 1.13
ZCCHC3-201ENST00000500893 PANK3Q9H999 370 aa22.11■■□□□ 1.13
ZCCHC3-201ENST00000500893 FANCIQ9NVI1 1328 aa22.11■■□□□ 1.13
ZCCHC3-201ENST00000500893 PLIN1O60240 522 aa22.1■■□□□ 1.13
ZCCHC3-201ENST00000500893 EXOC6Q8TAG9 804 aa22.09■■□□□ 1.13
ZCCHC3-201ENST00000500893 RALBP1Q15311 655 aa22.08■■□□□ 1.13
ZCCHC3-201ENST00000500893 BCORL1Q5H9F3 1711 aa22.08■■□□□ 1.13
ZCCHC3-201ENST00000500893 KTN1Q86UP2 1357 aaKnown RBP22.08■■□□□ 1.12
ZCCHC3-201ENST00000500893 SMG6Q86US8 1419 aaKnown RBP22.07■■□□□ 1.12
ZCCHC3-201ENST00000500893 RCAN3Q9UKA8 241 aa22.07■■□□□ 1.12
ZCCHC3-201ENST00000500893 NLRP13Q86W25 1043 aa22.06■■□□□ 1.12
ZCCHC3-201ENST00000500893 SENP3Q9H4L4 574 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms