RNA–Protein interactions for RNA: ENST00000495265.5

BRD9-212, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,843 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-212ENST00000495265 GCC2Q8IWJ2 1684 aa24.09■■□□□ 1.45
BRD9-212ENST00000495265 UGGT2Q9NYU1 1516 aa24.09■■□□□ 1.45
BRD9-212ENST00000495265 KIF7Q2M1P5 1343 aa24.08■■□□□ 1.45
BRD9-212ENST00000495265 MAGI3Q5TCQ9 1506 aa24.06■■□□□ 1.44
BRD9-212ENST00000495265 SAMD9Q5K651 1589 aa24.06■■□□□ 1.44
BRD9-212ENST00000495265 CNGB1Q14028 1251 aaPredicted RBP24.05■■□□□ 1.44
BRD9-212ENST00000495265 SMG6Q86US8 1419 aaKnown RBP24.04■■□□□ 1.44
BRD9-212ENST00000495265 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
BRD9-212ENST00000495265 CCDC136Q96JN2 1154 aa24.02■■□□□ 1.44
BRD9-212ENST00000495265 TCOF1Q13428 1488 aaKnown RBP24.02■■□□□ 1.44
BRD9-212ENST00000495265 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
BRD9-212ENST00000495265 THOC2Q8NI27 1593 aaKnown RBP24■■□□□ 1.43
BRD9-212ENST00000495265 SENP3-EIF4A1A0A087X0R7 540 aa24■■□□□ 1.43
BRD9-212ENST00000495265 IPO9Q96P70 1041 aaKnown RBP24■■□□□ 1.43
BRD9-212ENST00000495265 ANP32AP39687 249 aaKnown RBP24■■□□□ 1.43
BRD9-212ENST00000495265 NUDCQ9Y266 331 aa23.99■■□□□ 1.43
BRD9-212ENST00000495265 SPATA31E1Q6ZUB1 1445 aa23.99■■□□□ 1.43
BRD9-212ENST00000495265 RNF123Q5XPI4 1314 aa23.96■■□□□ 1.43
BRD9-212ENST00000495265 ANKRD30BQ9BXX2 1392 aa23.96■■□□□ 1.43
BRD9-212ENST00000495265 TEX14Q8IWB6 1497 aa23.95■■□□□ 1.43
BRD9-212ENST00000495265 RPRD2Q5VT52 1461 aaKnown RBP23.95■■□□□ 1.42
BRD9-212ENST00000495265 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
BRD9-212ENST00000495265 TARBP1Q13395 1621 aaKnown RBP23.93■■□□□ 1.42
BRD9-212ENST00000495265 ZBTB47Q9UFB7 747 aaPredicted RBP23.93■■□□□ 1.42
BRD9-212ENST00000495265 WDR62O43379 1518 aa23.93■■□□□ 1.42
BRD9-212ENST00000495265 POLR1AO95602 1720 aaPredicted RBP23.92■■□□□ 1.42
BRD9-212ENST00000495265 DHX29Q7Z478 1369 aaKnown RBP23.92■■□□□ 1.42
BRD9-212ENST00000495265 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
BRD9-212ENST00000495265 RTL5Q5HYW3 569 aaPredicted RBP23.9■■□□□ 1.42
BRD9-212ENST00000495265 POLR3GLQ9BT43 218 aa23.9■■□□□ 1.42
BRD9-212ENST00000495265 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
BRD9-212ENST00000495265 SLC4A1APQ9BWU0 796 aaKnown RBP23.84■■□□□ 1.41
BRD9-212ENST00000495265 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
BRD9-212ENST00000495265 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
BRD9-212ENST00000495265 CDK13Q14004 1512 aaKnown RBP23.81■■□□□ 1.4
BRD9-212ENST00000495265 EPRSP07814 1512 aaKnown RBP23.81■■□□□ 1.4
BRD9-212ENST00000495265 PNISRQ8TF01 805 aaKnown RBP23.8■■□□□ 1.4
BRD9-212ENST00000495265 GAPVD1Q14C86 1478 aa23.8■■□□□ 1.4
BRD9-212ENST00000495265 BCORL1Q5H9F3 1711 aa23.79■■□□□ 1.4
BRD9-212ENST00000495265 NPM2Q86SE8 214 aaKnown RBP23.79■■□□□ 1.4
BRD9-212ENST00000495265 PRKCSHP14314 528 aaPredicted RBP23.79■■□□□ 1.4
BRD9-212ENST00000495265 ZNF326Q5BKZ1 582 aaKnown RBP23.78■■□□□ 1.4
BRD9-212ENST00000495265 DAPK1P53355 1430 aa23.78■■□□□ 1.4
BRD9-212ENST00000495265 ANO8Q9HCE9 1232 aaPredicted RBP23.77■■□□□ 1.4
BRD9-212ENST00000495265 USP47Q96K76 1375 aa23.77■■□□□ 1.4
BRD9-212ENST00000495265 TMC1Q8TDI8 760 aa23.76■■□□□ 1.39
BRD9-212ENST00000495265 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
BRD9-212ENST00000495265 ROCK1Q13464 1354 aa23.75■■□□□ 1.39
BRD9-212ENST00000495265 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
BRD9-212ENST00000495265 ZNF644Q9H582 1327 aaPredicted RBP23.74■■□□□ 1.39
BRD9-212ENST00000495265 IL27Q8NEV9 243 aa23.74■■□□□ 1.39
BRD9-212ENST00000495265 ABCC5O15440 1437 aa23.73■■□□□ 1.39
BRD9-212ENST00000495265 EXOC6Q8TAG9 804 aa23.72■■□□□ 1.39
BRD9-212ENST00000495265 LAS1LQ9Y4W2 734 aaKnown RBP23.7■■□□□ 1.39
BRD9-212ENST00000495265 MBD5Q9P267 1494 aa23.69■■□□□ 1.38
BRD9-212ENST00000495265 RRP1P56182 461 aaKnown RBP23.69■■□□□ 1.38
BRD9-212ENST00000495265 PZPP20742 1482 aa23.68■■□□□ 1.38
BRD9-212ENST00000495265 DNMT1P26358 1616 aaKnown RBP23.67■■□□□ 1.38
BRD9-212ENST00000495265 SALL2Q9Y467 1007 aaPredicted RBP23.67■■□□□ 1.38
BRD9-212ENST00000495265 PDE4AP27815 886 aa23.66■■□□□ 1.38
BRD9-212ENST00000495265 TCERG1O14776 1098 aaKnown RBP23.65■■□□□ 1.38
BRD9-212ENST00000495265 NEFMP07197 916 aa23.65■■□□□ 1.38
BRD9-212ENST00000495265 RTN4Q9NQC3 1192 aaKnown RBP23.65■■□□□ 1.38
BRD9-212ENST00000495265 KDM5CP41229 1560 aa23.64■■□□□ 1.38
BRD9-212ENST00000495265 LRPPRCP42704 1394 aaKnown RBP23.64■■□□□ 1.38
BRD9-212ENST00000495265 ARID4BQ4LE39 1312 aaPredicted RBP23.63■■□□□ 1.37
BRD9-212ENST00000495265 RCAN3Q9UKA8 241 aa23.61■■□□□ 1.37
BRD9-212ENST00000495265 BACH2Q9BYV9 841 aa23.61■■□□□ 1.37
BRD9-212ENST00000495265 ADAMTS12P58397 1594 aa23.6■■□□□ 1.37
BRD9-212ENST00000495265 KIF14Q15058 1648 aa23.6■■□□□ 1.37
BRD9-212ENST00000495265 KIF15Q9NS87 1388 aa23.6■■□□□ 1.37
BRD9-212ENST00000495265 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
BRD9-212ENST00000495265 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
BRD9-212ENST00000495265 IQGAP2Q13576 1575 aa23.58■■□□□ 1.37
BRD9-212ENST00000495265 ROCK2O75116 1388 aaKnown RBP23.58■■□□□ 1.37
BRD9-212ENST00000495265 KIAA1107Q9UPP5 1409 aa23.58■■□□□ 1.36
BRD9-212ENST00000495265 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
BRD9-212ENST00000495265 PKD2Q13563 968 aa23.57■■□□□ 1.36
BRD9-212ENST00000495265 BRD4O60885 1362 aaPredicted RBP23.57■■□□□ 1.36
BRD9-212ENST00000495265 CARD11Q9BXL7 1154 aa23.55■■□□□ 1.36
BRD9-212ENST00000495265 USP35Q9P2H5 1018 aa23.55■■□□□ 1.36
BRD9-212ENST00000495265 MS4A1P11836 297 aa23.53■■□□□ 1.36
BRD9-212ENST00000495265 SKAP1Q86WV1 359 aa23.52■■□□□ 1.36
BRD9-212ENST00000495265 ST20-MTHFSA0A0A6YYL1 179 aa23.51■■□□□ 1.35
BRD9-212ENST00000495265 RALBP1Q15311 655 aa23.51■■□□□ 1.35
BRD9-212ENST00000495265 RALGAPBQ86X10 1494 aa23.5■■□□□ 1.35
BRD9-212ENST00000495265 PPM1GO15355 546 aaPredicted RBP23.49■■□□□ 1.35
BRD9-212ENST00000495265 CDCA7LQ96GN5 454 aa23.49■■□□□ 1.35
BRD9-212ENST00000495265 PLIN1O60240 522 aa23.48■■□□□ 1.35
BRD9-212ENST00000495265 UHRF1BP1Q6BDS2 1440 aa23.48■■□□□ 1.35
BRD9-212ENST00000495265 WASHC2CQ9Y4E1 1318 aa23.48■■□□□ 1.35
BRD9-212ENST00000495265 KDM2AQ9Y2K7 1162 aa23.47■■□□□ 1.35
BRD9-212ENST00000495265 CAMSAP2Q08AD1 1489 aa23.45■■□□□ 1.35
BRD9-212ENST00000495265 KTN1Q86UP2 1357 aaKnown RBP23.45■■□□□ 1.34
BRD9-212ENST00000495265 CFDP1Q9UEE9 299 aaPredicted RBP23.44■■□□□ 1.34
BRD9-212ENST00000495265 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
BRD9-212ENST00000495265 NUP153P49790 1475 aaKnown RBP23.44■■□□□ 1.34
BRD9-212ENST00000495265 PDE3BQ13370 1112 aa23.43■■□□□ 1.34
BRD9-212ENST00000495265 NLRP13Q86W25 1043 aa23.41■■□□□ 1.34
BRD9-212ENST00000495265 CRBNQ96SW2 442 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms