RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
TRIM59-206ENST00000494486 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
TRIM59-206ENST00000494486 PHF23Q9BUL5 403 aaPredicted RBP19.31■□□□□ 0.68
TRIM59-206ENST00000494486 SETD1BQ9UPS6 1966 aaKnown RBP19.3■□□□□ 0.68
TRIM59-206ENST00000494486 ATP10AO60312 1499 aa19.28■□□□□ 0.68
TRIM59-206ENST00000494486 HSPA1LP34931 641 aa19.28■□□□□ 0.68
TRIM59-206ENST00000494486 NCOA1Q15788 1441 aa19.27■□□□□ 0.68
TRIM59-206ENST00000494486 C9orf84Q5VXU9 1444 aa19.25■□□□□ 0.67
TRIM59-206ENST00000494486 CFAP74Q9C0B2 1584 aa19.25■□□□□ 0.67
TRIM59-206ENST00000494486 ZNF335Q9H4Z2 1342 aaPredicted RBP19.25■□□□□ 0.67
TRIM59-206ENST00000494486 HECW1Q76N89 1606 aa19.24■□□□□ 0.67
TRIM59-206ENST00000494486 PLEKHD1A6NEE1 506 aa19.23■□□□□ 0.67
TRIM59-206ENST00000494486 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
TRIM59-206ENST00000494486 CTTNBP2Q8WZ74 1663 aa19.21■□□□□ 0.67
TRIM59-206ENST00000494486 TRAPPC8Q9Y2L5 1435 aa19.21■□□□□ 0.67
TRIM59-206ENST00000494486 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
TRIM59-206ENST00000494486 SCAPERQ9BY12 1400 aa19.18■□□□□ 0.66
TRIM59-206ENST00000494486 TOM1O60784 492 aa19.17■□□□□ 0.66
TRIM59-206ENST00000494486 PIP4K2BP78356 416 aa19.17■□□□□ 0.66
TRIM59-206ENST00000494486 ESF1Q9H501 851 aaKnown RBP19.16■□□□□ 0.66
TRIM59-206ENST00000494486 NCKAP5LQ9HCH0 1330 aa19.15■□□□□ 0.66
TRIM59-206ENST00000494486 PKD2Q13563 968 aa19.13■□□□□ 0.65
TRIM59-206ENST00000494486 RAPGEF6Q8TEU7 1601 aa19.12■□□□□ 0.65
TRIM59-206ENST00000494486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRIM59-206ENST00000494486 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
TRIM59-206ENST00000494486 NUP153P49790 1475 aaKnown RBP19.09■□□□□ 0.65
TRIM59-206ENST00000494486 C3P01024 1663 aa19.08■□□□□ 0.64
TRIM59-206ENST00000494486 PLCH2O75038 1416 aa19.07■□□□□ 0.64
TRIM59-206ENST00000494486 EFCAB2Q5VUJ9 269 aa19.04■□□□□ 0.64
TRIM59-206ENST00000494486 NPATQ14207 1427 aa19.03■□□□□ 0.64
TRIM59-206ENST00000494486 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
TRIM59-206ENST00000494486 MYT1LQ9UL68 1186 aa19.03■□□□□ 0.64
TRIM59-206ENST00000494486 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
TRIM59-206ENST00000494486 PLA2R1Q13018 1463 aa19.02■□□□□ 0.63
TRIM59-206ENST00000494486 RGS17Q9UGC6 210 aaPredicted RBP19.01■□□□□ 0.63
TRIM59-206ENST00000494486 ZNF518AQ6AHZ1 1483 aa19■□□□□ 0.63
TRIM59-206ENST00000494486 AGLP35573 1532 aa19■□□□□ 0.63
TRIM59-206ENST00000494486 REREQ9P2R6 1566 aa18.99■□□□□ 0.63
TRIM59-206ENST00000494486 PRXQ9BXM0 1461 aa18.99■□□□□ 0.63
TRIM59-206ENST00000494486 AFAP1Q8N556 730 aa18.99■□□□□ 0.63
TRIM59-206ENST00000494486 TCOF1Q13428 1488 aaKnown RBP18.97■□□□□ 0.63
TRIM59-206ENST00000494486 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
TRIM59-206ENST00000494486 CPS1P31327 1500 aa18.95■□□□□ 0.62
TRIM59-206ENST00000494486 SAMD9Q5K651 1589 aa18.95■□□□□ 0.62
TRIM59-206ENST00000494486 DIP2CQ9Y2E4 1556 aa18.93■□□□□ 0.62
TRIM59-206ENST00000494486 ZMYM3Q14202 1370 aa18.93■□□□□ 0.62
TRIM59-206ENST00000494486 KDM5CP41229 1560 aa18.92■□□□□ 0.62
TRIM59-206ENST00000494486 MLH3Q9UHC1 1453 aa18.9■□□□□ 0.62
TRIM59-206ENST00000494486 SHANK2Q9UPX8 1470 aa18.89■□□□□ 0.61
TRIM59-206ENST00000494486 POTEAQ6S8J7 498 aa18.86■□□□□ 0.61
TRIM59-206ENST00000494486 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
TRIM59-206ENST00000494486 CEP170BQ9Y4F5 1589 aaPredicted RBP18.83■□□□□ 0.6
TRIM59-206ENST00000494486 MROH2AA6NES4 1674 aa18.82■□□□□ 0.6
TRIM59-206ENST00000494486 ABCA6Q8N139 1617 aa18.82■□□□□ 0.6
TRIM59-206ENST00000494486 ZNF142P52746 1687 aaPredicted RBP18.82■□□□□ 0.6
TRIM59-206ENST00000494486 ALKQ9UM73 1620 aa18.82■□□□□ 0.6
TRIM59-206ENST00000494486 MYO3AQ8NEV4 1616 aa18.78■□□□□ 0.6
TRIM59-206ENST00000494486 MYO5CQ9NQX4 1742 aa18.77■□□□□ 0.6
TRIM59-206ENST00000494486 CDK11AQ9UQ88 783 aaPredicted RBP18.77■□□□□ 0.6
TRIM59-206ENST00000494486 ARHGAP5Q13017 1502 aa18.77■□□□□ 0.6
TRIM59-206ENST00000494486 CDK13Q14004 1512 aaKnown RBP18.76■□□□□ 0.59
TRIM59-206ENST00000494486 RANGAP1P46060 587 aaPredicted RBP18.76■□□□□ 0.59
TRIM59-206ENST00000494486 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
TRIM59-206ENST00000494486 A2ML1A8K2U0 1454 aa18.74■□□□□ 0.59
TRIM59-206ENST00000494486 ANKLE2Q86XL3 938 aa18.72■□□□□ 0.59
TRIM59-206ENST00000494486 VWDEQ8N2E2 1590 aa18.7■□□□□ 0.58
TRIM59-206ENST00000494486 UPF1Q92900 1129 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRIM59-206ENST00000494486 DNMT1P26358 1616 aaKnown RBP18.68■□□□□ 0.58
TRIM59-206ENST00000494486 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
TRIM59-206ENST00000494486 KIDINS220Q9ULH0 1771 aa18.65■□□□□ 0.58
TRIM59-206ENST00000494486 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.58
TRIM59-206ENST00000494486 GGT6Q6P531 493 aa18.64■□□□□ 0.57
TRIM59-206ENST00000494486 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
TRIM59-206ENST00000494486 KIF14Q15058 1648 aa18.63■□□□□ 0.57
TRIM59-206ENST00000494486 CLTCQ00610 1675 aaKnown RBP18.63■□□□□ 0.57
TRIM59-206ENST00000494486 THEMISQ8N1K5 641 aaPredicted RBP18.63■□□□□ 0.57
TRIM59-206ENST00000494486 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
TRIM59-206ENST00000494486 TROQ12816 1431 aaPredicted RBP18.63■□□□□ 0.57
TRIM59-206ENST00000494486 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
TRIM59-206ENST00000494486 CLIP1P30622 1438 aa18.62■□□□□ 0.57
TRIM59-206ENST00000494486 ABCC1P33527 1531 aa18.62■□□□□ 0.57
TRIM59-206ENST00000494486 POLR1AO95602 1720 aaPredicted RBP18.62■□□□□ 0.57
TRIM59-206ENST00000494486 RNF17Q9BXT8 1623 aaKnown RBP18.61■□□□□ 0.57
TRIM59-206ENST00000494486 MED14O60244 1454 aa18.61■□□□□ 0.57
TRIM59-206ENST00000494486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.59■□□□□ 0.57
TRIM59-206ENST00000494486 SPAG9O60271 1321 aaKnown RBP18.59■□□□□ 0.57
TRIM59-206ENST00000494486 FAM135BQ49AJ0 1406 aa18.58■□□□□ 0.57
TRIM59-206ENST00000494486 SETD1AO15047 1707 aaKnown RBP18.57■□□□□ 0.56
TRIM59-206ENST00000494486 TNRQ92752 1358 aa18.57■□□□□ 0.56
TRIM59-206ENST00000494486 ITSN2Q9NZM3 1697 aa18.55■□□□□ 0.56
TRIM59-206ENST00000494486 A2MP01023 1474 aa18.54■□□□□ 0.56
TRIM59-206ENST00000494486 SYNMO15061 1565 aa18.54■□□□□ 0.56
TRIM59-206ENST00000494486 SAMD9LQ8IVG5 1584 aa18.54■□□□□ 0.56
TRIM59-206ENST00000494486 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
TRIM59-206ENST00000494486 FBXO31Q5XUX0 539 aaPredicted RBP18.53■□□□□ 0.56
TRIM59-206ENST00000494486 DEPDC5O75140 1603 aa18.52■□□□□ 0.56
TRIM59-206ENST00000494486 FMN1Q68DA7 1419 aa18.51■□□□□ 0.55
TRIM59-206ENST00000494486 PLXNC1O60486 1568 aa18.5■□□□□ 0.55
TRIM59-206ENST00000494486 FAM135AQ9P2D6 1515 aa18.49■□□□□ 0.55
TRIM59-206ENST00000494486 PREX2Q70Z35 1606 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms