RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.19
TRIM59-206ENST00000494486 ABCC9O60706 1549 aa27.3■■□□□ 1.96
TRIM59-206ENST00000494486 DNAJC5BQ9UF47 199 aa26.65■■□□□ 1.86
TRIM59-206ENST00000494486 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
TRIM59-206ENST00000494486 RB1CC1Q8TDY2 1594 aa25.5■■□□□ 1.67
TRIM59-206ENST00000494486 DNAJC5Q9H3Z4 198 aa25.36■■□□□ 1.65
TRIM59-206ENST00000494486 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
TRIM59-206ENST00000494486 NACADO15069 1562 aa25.08■■□□□ 1.61
TRIM59-206ENST00000494486 DCAF8L2P0C7V8 631 aa24.79■■□□□ 1.56
TRIM59-206ENST00000494486 BICRAQ9NZM4 1560 aa24.75■■□□□ 1.55
TRIM59-206ENST00000494486 CECR2Q9BXF3 1484 aa24.74■■□□□ 1.55
TRIM59-206ENST00000494486 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
TRIM59-206ENST00000494486 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
TRIM59-206ENST00000494486 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
TRIM59-206ENST00000494486 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
TRIM59-206ENST00000494486 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
TRIM59-206ENST00000494486 CUX2O14529 1486 aa24.03■■□□□ 1.44
TRIM59-206ENST00000494486 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
TRIM59-206ENST00000494486 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
TRIM59-206ENST00000494486 ERCC6Q03468 1493 aa23.68■■□□□ 1.38
TRIM59-206ENST00000494486 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
TRIM59-206ENST00000494486 ZCCHC6Q5VYS8 1495 aaKnown RBP23.52■■□□□ 1.36
TRIM59-206ENST00000494486 NCAPD3P42695 1498 aa23.22■■□□□ 1.31
TRIM59-206ENST00000494486 NESP48681 1621 aa23.11■■□□□ 1.29
TRIM59-206ENST00000494486 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
TRIM59-206ENST00000494486 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
TRIM59-206ENST00000494486 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
TRIM59-206ENST00000494486 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
TRIM59-206ENST00000494486 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
TRIM59-206ENST00000494486 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
TRIM59-206ENST00000494486 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
TRIM59-206ENST00000494486 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
TRIM59-206ENST00000494486 KIF21AQ7Z4S6 1674 aa22.66■■□□□ 1.22
TRIM59-206ENST00000494486 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
TRIM59-206ENST00000494486 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
TRIM59-206ENST00000494486 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
TRIM59-206ENST00000494486 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
TRIM59-206ENST00000494486 WDR62O43379 1518 aa22.54■■□□□ 1.2
TRIM59-206ENST00000494486 RIMBP3CA6NJZ7 1639 aa22.47■■□□□ 1.19
TRIM59-206ENST00000494486 RIMBP3BA6NNM3 1639 aa22.47■■□□□ 1.19
TRIM59-206ENST00000494486 RIMBP3Q9UFD9 1639 aa22.47■■□□□ 1.19
TRIM59-206ENST00000494486 CADPSQ9ULU8 1353 aa22.47■■□□□ 1.19
TRIM59-206ENST00000494486 TRHP20396 242 aaPredicted RBP22.46■■□□□ 1.19
TRIM59-206ENST00000494486 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.18
TRIM59-206ENST00000494486 CYB5RLQ6IPT4 315 aa22.34■■□□□ 1.17
TRIM59-206ENST00000494486 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
TRIM59-206ENST00000494486 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
TRIM59-206ENST00000494486 FANCD2Q9BXW9 1451 aa22.16■■□□□ 1.14
TRIM59-206ENST00000494486 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
TRIM59-206ENST00000494486 ARAP1Q96P48 1450 aa22.04■■□□□ 1.12
TRIM59-206ENST00000494486 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
TRIM59-206ENST00000494486 CFTRP13569 1480 aa21.95■■□□□ 1.1
TRIM59-206ENST00000494486 ZNF608Q9ULD9 1512 aaPredicted RBP21.92■■□□□ 1.1
TRIM59-206ENST00000494486 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
TRIM59-206ENST00000494486 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
TRIM59-206ENST00000494486 ILDR1Q86SU0 546 aaPredicted RBP21.82■■□□□ 1.08
TRIM59-206ENST00000494486 FBLN2P98095 1184 aa21.75■■□□□ 1.07
TRIM59-206ENST00000494486 WIZO95785 1651 aa21.69■■□□□ 1.06
TRIM59-206ENST00000494486 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
TRIM59-206ENST00000494486 CHD1O14646 1710 aa21.67■■□□□ 1.06
TRIM59-206ENST00000494486 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.05
TRIM59-206ENST00000494486 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
TRIM59-206ENST00000494486 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
TRIM59-206ENST00000494486 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
TRIM59-206ENST00000494486 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
TRIM59-206ENST00000494486 CHMP7Q8WUX9 453 aaPredicted RBP21.44■■□□□ 1.02
TRIM59-206ENST00000494486 GAPVD1Q14C86 1478 aa21.42■■□□□ 1.02
TRIM59-206ENST00000494486 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
TRIM59-206ENST00000494486 SYNJ1O43426 1573 aa21.41■■□□□ 1.02
TRIM59-206ENST00000494486 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
TRIM59-206ENST00000494486 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.02
TRIM59-206ENST00000494486 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
TRIM59-206ENST00000494486 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
TRIM59-206ENST00000494486 KDM4FA0A1W2PPD8 638 aa21.33■■□□□ 1.01
TRIM59-206ENST00000494486 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
TRIM59-206ENST00000494486 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
TRIM59-206ENST00000494486 SOGA1O94964 1423 aa21.25■□□□□ 0.99
TRIM59-206ENST00000494486 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
TRIM59-206ENST00000494486 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
TRIM59-206ENST00000494486 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
TRIM59-206ENST00000494486 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
TRIM59-206ENST00000494486 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
TRIM59-206ENST00000494486 KIF13AQ9H1H9 1805 aa21.08■□□□□ 0.97
TRIM59-206ENST00000494486 FAM69CQ0P6D2 419 aa21.08■□□□□ 0.97
TRIM59-206ENST00000494486 ERCC6L2Q5T890 1561 aa21.05■□□□□ 0.96
TRIM59-206ENST00000494486 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
TRIM59-206ENST00000494486 ABCC10Q5T3U5 1492 aa21■□□□□ 0.95
TRIM59-206ENST00000494486 FBXO41Q8TF61 875 aa20.96■□□□□ 0.95
TRIM59-206ENST00000494486 CEP170Q5SW79 1584 aa20.95■□□□□ 0.94
TRIM59-206ENST00000494486 KDM6BO15054 1643 aa20.94■□□□□ 0.94
TRIM59-206ENST00000494486 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
TRIM59-206ENST00000494486 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
TRIM59-206ENST00000494486 NUP160Q12769 1436 aa20.87■□□□□ 0.93
TRIM59-206ENST00000494486 HECW2Q9P2P5 1572 aa20.86■□□□□ 0.93
TRIM59-206ENST00000494486 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
TRIM59-206ENST00000494486 MAPKBP1O60336 1514 aa20.83■□□□□ 0.92
TRIM59-206ENST00000494486 ADGRL1O94910 1474 aa20.82■□□□□ 0.92
TRIM59-206ENST00000494486 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
TRIM59-206ENST00000494486 DIP2BQ9P265 1576 aa20.81■□□□□ 0.92
TRIM59-206ENST00000494486 CUX1P39880 1505 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms