RNA–Protein interactions for RNA: ENST00000494428.5

TTLL4-221, Transcript of tubulin tyrosine ligase like 4, humanhuman

TSL 3

Gene TTLL4, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTLL4-221ENST00000494428 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
TTLL4-221ENST00000494428 ARHGEF12Q9NZN5 1544 aa13.29□□□□□ -0.28
TTLL4-221ENST00000494428 MED1Q15648 1581 aaPredicted RBP13.29□□□□□ -0.28
TTLL4-221ENST00000494428 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
TTLL4-221ENST00000494428 HECW1Q76N89 1606 aa13.27□□□□□ -0.29
TTLL4-221ENST00000494428 SETD1BQ9UPS6 1966 aaKnown RBP13.27□□□□□ -0.29
TTLL4-221ENST00000494428 MAGI2Q86UL8 1455 aa13.26□□□□□ -0.29
TTLL4-221ENST00000494428 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
TTLL4-221ENST00000494428 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
TTLL4-221ENST00000494428 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
TTLL4-221ENST00000494428 RAPGEF6Q8TEU7 1601 aa13.23□□□□□ -0.29
TTLL4-221ENST00000494428 ATP10AO60312 1499 aa13.22□□□□□ -0.29
TTLL4-221ENST00000494428 ZNF335Q9H4Z2 1342 aaPredicted RBP13.21□□□□□ -0.29
TTLL4-221ENST00000494428 HSPA1LP34931 641 aa13.21□□□□□ -0.29
TTLL4-221ENST00000494428 NCOA1Q15788 1441 aa13.21□□□□□ -0.3
TTLL4-221ENST00000494428 PIP4K2BP78356 416 aa13.19□□□□□ -0.3
TTLL4-221ENST00000494428 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
TTLL4-221ENST00000494428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
TTLL4-221ENST00000494428 C3P01024 1663 aa13.18□□□□□ -0.3
TTLL4-221ENST00000494428 PLEKHD1A6NEE1 506 aa13.18□□□□□ -0.3
TTLL4-221ENST00000494428 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
TTLL4-221ENST00000494428 ESF1Q9H501 851 aaKnown RBP13.16□□□□□ -0.3
TTLL4-221ENST00000494428 CAMSAP1Q5T5Y3 1602 aa13.16□□□□□ -0.3
TTLL4-221ENST00000494428 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
TTLL4-221ENST00000494428 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
TTLL4-221ENST00000494428 TRAPPC8Q9Y2L5 1435 aa13.14□□□□□ -0.31
TTLL4-221ENST00000494428 SAMD9Q5K651 1589 aa13.1□□□□□ -0.31
TTLL4-221ENST00000494428 TOM1O60784 492 aa13.09□□□□□ -0.31
TTLL4-221ENST00000494428 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
TTLL4-221ENST00000494428 RANGAP1P46060 587 aaPredicted RBP13.08□□□□□ -0.32
TTLL4-221ENST00000494428 PLCH2O75038 1416 aa13.07□□□□□ -0.32
TTLL4-221ENST00000494428 PRXQ9BXM0 1461 aa13.07□□□□□ -0.32
TTLL4-221ENST00000494428 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
TTLL4-221ENST00000494428 ZNF518AQ6AHZ1 1483 aa13.06□□□□□ -0.32
TTLL4-221ENST00000494428 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
TTLL4-221ENST00000494428 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
TTLL4-221ENST00000494428 PPP6R1Q9UPN7 881 aa13.05□□□□□ -0.32
TTLL4-221ENST00000494428 PKD2Q13563 968 aa13.04□□□□□ -0.32
TTLL4-221ENST00000494428 EFCAB2Q5VUJ9 269 aa13.04□□□□□ -0.32
TTLL4-221ENST00000494428 ABCA6Q8N139 1617 aa13.03□□□□□ -0.32
TTLL4-221ENST00000494428 CNTLNQ9NXG0 1405 aa13.03□□□□□ -0.32
TTLL4-221ENST00000494428 KDM5CP41229 1560 aa13.03□□□□□ -0.32
TTLL4-221ENST00000494428 REREQ9P2R6 1566 aa13.03□□□□□ -0.32
TTLL4-221ENST00000494428 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.32
TTLL4-221ENST00000494428 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
TTLL4-221ENST00000494428 AGLP35573 1532 aa13.02□□□□□ -0.33
TTLL4-221ENST00000494428 NPATQ14207 1427 aa13.01□□□□□ -0.33
TTLL4-221ENST00000494428 CDK13Q14004 1512 aaKnown RBP13□□□□□ -0.33
TTLL4-221ENST00000494428 TCOF1Q13428 1488 aaKnown RBP13□□□□□ -0.33
TTLL4-221ENST00000494428 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
TTLL4-221ENST00000494428 ZNF142P52746 1687 aaPredicted RBP12.99□□□□□ -0.33
TTLL4-221ENST00000494428 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
TTLL4-221ENST00000494428 CPS1P31327 1500 aa12.98□□□□□ -0.33
TTLL4-221ENST00000494428 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
TTLL4-221ENST00000494428 RGS17Q9UGC6 210 aaPredicted RBP12.98□□□□□ -0.33
TTLL4-221ENST00000494428 PTPRKQ15262 1439 aa12.96□□□□□ -0.33
TTLL4-221ENST00000494428 ZMYM3Q14202 1370 aa12.96□□□□□ -0.33
TTLL4-221ENST00000494428 MROH2AA6NES4 1674 aa12.96□□□□□ -0.33
TTLL4-221ENST00000494428 MLH3Q9UHC1 1453 aa12.95□□□□□ -0.34
TTLL4-221ENST00000494428 SHANK2Q9UPX8 1470 aa12.94□□□□□ -0.34
TTLL4-221ENST00000494428 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
TTLL4-221ENST00000494428 KIF14Q15058 1648 aa12.92□□□□□ -0.34
TTLL4-221ENST00000494428 ALKQ9UM73 1620 aa12.92□□□□□ -0.34
TTLL4-221ENST00000494428 CLTCQ00610 1675 aaKnown RBP12.92□□□□□ -0.34
TTLL4-221ENST00000494428 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
TTLL4-221ENST00000494428 POTEAQ6S8J7 498 aa12.9□□□□□ -0.34
TTLL4-221ENST00000494428 POLR1AO95602 1720 aaPredicted RBP12.9□□□□□ -0.34
TTLL4-221ENST00000494428 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
TTLL4-221ENST00000494428 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
TTLL4-221ENST00000494428 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
TTLL4-221ENST00000494428 DNMT1P26358 1616 aaKnown RBP12.87□□□□□ -0.35
TTLL4-221ENST00000494428 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
TTLL4-221ENST00000494428 A2ML1A8K2U0 1454 aa12.86□□□□□ -0.35
TTLL4-221ENST00000494428 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
TTLL4-221ENST00000494428 ABCC1P33527 1531 aa12.86□□□□□ -0.35
TTLL4-221ENST00000494428 VWDEQ8N2E2 1590 aa12.86□□□□□ -0.35
TTLL4-221ENST00000494428 CDC42BPBQ9Y5S2 1711 aa12.85□□□□□ -0.35
TTLL4-221ENST00000494428 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
TTLL4-221ENST00000494428 RNF17Q9BXT8 1623 aaKnown RBP12.84□□□□□ -0.35
TTLL4-221ENST00000494428 CLIP1P30622 1438 aa12.83□□□□□ -0.36
TTLL4-221ENST00000494428 GGT6Q6P531 493 aa12.83□□□□□ -0.36
TTLL4-221ENST00000494428 TROQ12816 1431 aaPredicted RBP12.82□□□□□ -0.36
TTLL4-221ENST00000494428 PREX2Q70Z35 1606 aa12.8□□□□□ -0.36
TTLL4-221ENST00000494428 CHIC1Q5VXU3 224 aa12.8□□□□□ -0.36
TTLL4-221ENST00000494428 ANKLE2Q86XL3 938 aa12.8□□□□□ -0.36
TTLL4-221ENST00000494428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
TTLL4-221ENST00000494428 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
TTLL4-221ENST00000494428 EEA1Q15075 1411 aa12.79□□□□□ -0.36
TTLL4-221ENST00000494428 LRRC7Q96NW7 1537 aa12.79□□□□□ -0.36
TTLL4-221ENST00000494428 SAMD9LQ8IVG5 1584 aa12.79□□□□□ -0.36
TTLL4-221ENST00000494428 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
TTLL4-221ENST00000494428 STRCP1A6NGW2 1772 aa12.78□□□□□ -0.36
TTLL4-221ENST00000494428 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
TTLL4-221ENST00000494428 ZNF777Q9ULD5 760 aaPredicted RBP12.77□□□□□ -0.37
TTLL4-221ENST00000494428 SYNMO15061 1565 aa12.77□□□□□ -0.37
TTLL4-221ENST00000494428 TNRQ92752 1358 aa12.76□□□□□ -0.37
TTLL4-221ENST00000494428 PLXNC1O60486 1568 aa12.75□□□□□ -0.37
TTLL4-221ENST00000494428 A2MP01023 1474 aa12.75□□□□□ -0.37
TTLL4-221ENST00000494428 IQGAP1P46940 1657 aa12.75□□□□□ -0.37
TTLL4-221ENST00000494428 ATP7AQ04656 1500 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms