RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 TIAM1Q13009 1591 aa10□□□□□ -0.81
BRD9-211ENST00000494422 CFAP43Q8NDM7 1665 aa9.99□□□□□ -0.81
BRD9-211ENST00000494422 LRRIQ1Q96JM4 1722 aa9.99□□□□□ -0.81
BRD9-211ENST00000494422 EHBP1L1Q8N3D4 1523 aa9.99□□□□□ -0.81
BRD9-211ENST00000494422 ZNF219Q9P2Y4 722 aaPredicted RBP9.99□□□□□ -0.81
BRD9-211ENST00000494422 KIF14Q15058 1648 aa9.99□□□□□ -0.81
BRD9-211ENST00000494422 MTUS2Q5JR59 1369 aa9.99□□□□□ -0.81
BRD9-211ENST00000494422 ABCA9Q8IUA7 1624 aa9.98□□□□□ -0.81
BRD9-211ENST00000494422 FAM69CQ0P6D2 419 aa9.98□□□□□ -0.81
BRD9-211ENST00000494422 ARID3CA6NKF2 412 aa9.97□□□□□ -0.81
BRD9-211ENST00000494422 PHLDB1Q86UU1 1377 aa9.97□□□□□ -0.81
BRD9-211ENST00000494422 TEX14Q8IWB6 1497 aa9.97□□□□□ -0.81
BRD9-211ENST00000494422 ARAP3Q8WWN8 1544 aa9.97□□□□□ -0.81
BRD9-211ENST00000494422 KIF13AQ9H1H9 1805 aa9.96□□□□□ -0.81
BRD9-211ENST00000494422 LRRC9Q6ZRR7 1453 aa9.96□□□□□ -0.82
BRD9-211ENST00000494422 MAGI3Q5TCQ9 1506 aa9.96□□□□□ -0.82
BRD9-211ENST00000494422 MAP3K4Q9Y6R4 1608 aa9.96□□□□□ -0.82
BRD9-211ENST00000494422 KCNH8Q96L42 1107 aa9.95□□□□□ -0.82
BRD9-211ENST00000494422 CD109Q6YHK3 1445 aa9.95□□□□□ -0.82
BRD9-211ENST00000494422 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.94□□□□□ -0.82
BRD9-211ENST00000494422 SUPT6HQ7KZ85 1726 aaKnown RBP9.93□□□□□ -0.82
BRD9-211ENST00000494422 CFAP74Q9C0B2 1584 aa9.92□□□□□ -0.82
BRD9-211ENST00000494422 PLCH2O75038 1416 aa9.92□□□□□ -0.82
BRD9-211ENST00000494422 NEO1Q92859 1461 aa9.91□□□□□ -0.82
BRD9-211ENST00000494422 RTN4Q9NQC3 1192 aaKnown RBP9.91□□□□□ -0.82
BRD9-211ENST00000494422 MYO5CQ9NQX4 1742 aa9.9□□□□□ -0.82
BRD9-211ENST00000494422 CCNB3Q8WWL7 1395 aa9.9□□□□□ -0.82
BRD9-211ENST00000494422 EFCAB2Q5VUJ9 269 aa9.9□□□□□ -0.82
BRD9-211ENST00000494422 NCOA2Q15596 1464 aa9.9□□□□□ -0.83
BRD9-211ENST00000494422 ITSN2Q9NZM3 1697 aa9.9□□□□□ -0.83
BRD9-211ENST00000494422 TTC37Q6PGP7 1564 aa9.89□□□□□ -0.83
BRD9-211ENST00000494422 MIA2Q96PC5 1412 aa9.89□□□□□ -0.83
BRD9-211ENST00000494422 PREX2Q70Z35 1606 aa9.89□□□□□ -0.83
BRD9-211ENST00000494422 FANCAO15360 1455 aa9.88□□□□□ -0.83
BRD9-211ENST00000494422 PLEKHH2Q8IVE3 1493 aa9.88□□□□□ -0.83
BRD9-211ENST00000494422 AMER1Q5JTC6 1135 aaPredicted RBP9.88□□□□□ -0.83
BRD9-211ENST00000494422 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
BRD9-211ENST00000494422 PPRC1Q5VV67 1664 aaKnown RBP9.87□□□□□ -0.83
BRD9-211ENST00000494422 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
BRD9-211ENST00000494422 ARHGAP5Q13017 1502 aa9.87□□□□□ -0.83
BRD9-211ENST00000494422 CFDP1Q9UEE9 299 aaPredicted RBP9.86□□□□□ -0.83
BRD9-211ENST00000494422 CDC42BPAQ5VT25 1732 aa9.85□□□□□ -0.83
BRD9-211ENST00000494422 MYOM3Q5VTT5 1437 aa9.85□□□□□ -0.83
BRD9-211ENST00000494422 AKNAQ7Z591 1439 aa9.85□□□□□ -0.83
BRD9-211ENST00000494422 KIAA1107Q9UPP5 1409 aa9.85□□□□□ -0.83
BRD9-211ENST00000494422 RSPH4AQ5TD94 716 aa9.85□□□□□ -0.83
BRD9-211ENST00000494422 TSPOAP1O95153 1857 aa9.85□□□□□ -0.83
BRD9-211ENST00000494422 CDC42BPBQ9Y5S2 1711 aa9.85□□□□□ -0.83
BRD9-211ENST00000494422 SAMD1Q6SPF0 538 aaPredicted RBP9.83□□□□□ -0.84
BRD9-211ENST00000494422 ADGRL1O94910 1474 aa9.83□□□□□ -0.84
BRD9-211ENST00000494422 DENND4BO75064 1496 aaPredicted RBP9.82□□□□□ -0.84
BRD9-211ENST00000494422 KDM6BO15054 1643 aa9.82□□□□□ -0.84
BRD9-211ENST00000494422 ZNF518AQ6AHZ1 1483 aa9.81□□□□□ -0.84
BRD9-211ENST00000494422 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.81□□□□□ -0.842e-9■■□□□ 11.7
BRD9-211ENST00000494422 ABCC1P33527 1531 aa9.81□□□□□ -0.84
BRD9-211ENST00000494422 MAGI2Q86UL8 1455 aa9.8□□□□□ -0.84
BRD9-211ENST00000494422 FGD6Q6ZV73 1430 aa9.8□□□□□ -0.84
BRD9-211ENST00000494422 SCAPERQ9BY12 1400 aa9.8□□□□□ -0.84
BRD9-211ENST00000494422 TCOF1Q13428 1488 aaKnown RBP9.79□□□□□ -0.84
BRD9-211ENST00000494422 SLC4A1APQ9BWU0 796 aaKnown RBP9.79□□□□□ -0.84
BRD9-211ENST00000494422 POGZQ7Z3K3 1410 aa9.79□□□□□ -0.84
BRD9-211ENST00000494422 SAMD9LQ8IVG5 1584 aa9.79□□□□□ -0.84
BRD9-211ENST00000494422 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
BRD9-211ENST00000494422 RBM42Q9BTD8 480 aaKnown RBP9.78□□□□□ -0.84
BRD9-211ENST00000494422 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
BRD9-211ENST00000494422 ARHGEF5Q12774 1597 aa9.78□□□□□ -0.84
BRD9-211ENST00000494422 ZMYM4Q5VZL5 1548 aa9.77□□□□□ -0.84
BRD9-211ENST00000494422 PTPN23Q9H3S7 1636 aa9.77□□□□□ -0.85
BRD9-211ENST00000494422 KDM5CP41229 1560 aa9.76□□□□□ -0.85
BRD9-211ENST00000494422 RTEL1-TNFRSF6BF6WH68 1400 aa9.76□□□□□ -0.85
BRD9-211ENST00000494422 RRBP1Q9P2E9 1410 aaKnown RBP9.76□□□□□ -0.85
BRD9-211ENST00000494422 CCDC141Q6ZP82 1450 aa9.76□□□□□ -0.85
BRD9-211ENST00000494422 MBD5Q9P267 1494 aa9.76□□□□□ -0.85
BRD9-211ENST00000494422 MLH3Q9UHC1 1453 aa9.76□□□□□ -0.85
BRD9-211ENST00000494422 SYCP2Q9BX26 1530 aa9.76□□□□□ -0.85
BRD9-211ENST00000494422 RICTORQ6R327 1708 aa9.76□□□□□ -0.85
BRD9-211ENST00000494422 COL17A1Q9UMD9 1497 aaPredicted RBP9.75□□□□□ -0.85
BRD9-211ENST00000494422 TSPY4P0CV99 314 aa9.75□□□□□ -0.85
BRD9-211ENST00000494422 TSPY10P0CW01 314 aa9.75□□□□□ -0.85
BRD9-211ENST00000494422 CHRDL2Q6WN34 429 aa9.75□□□□□ -0.85
BRD9-211ENST00000494422 SHANK2Q9UPX8 1470 aa9.74□□□□□ -0.85
BRD9-211ENST00000494422 ARHGEF12Q9NZN5 1544 aa9.73□□□□□ -0.85
BRD9-211ENST00000494422 FRMPD1Q5SYB0 1578 aa9.73□□□□□ -0.85
BRD9-211ENST00000494422 HECW2Q9P2P5 1572 aa9.73□□□□□ -0.85
BRD9-211ENST00000494422 HNRNPMP52272 730 aaKnown RBP eCLIP9.73□□□□□ -0.853e-7■■■■□ 20.9
BRD9-211ENST00000494422 SPAG9O60271 1321 aaKnown RBP9.73□□□□□ -0.85
BRD9-211ENST00000494422 TRAPPC8Q9Y2L5 1435 aa9.73□□□□□ -0.85
BRD9-211ENST00000494422 MAST1Q9Y2H9 1570 aa9.72□□□□□ -0.85
BRD9-211ENST00000494422 DNMT1P26358 1616 aaKnown RBP9.72□□□□□ -0.85
BRD9-211ENST00000494422 RAPGEF3O95398 923 aa9.72□□□□□ -0.85
BRD9-211ENST00000494422 POLA2Q14181 598 aa9.72□□□□□ -0.85
BRD9-211ENST00000494422 ZNF644Q9H582 1327 aaPredicted RBP9.72□□□□□ -0.85
BRD9-211ENST00000494422 AFAP1Q8N556 730 aa9.71□□□□□ -0.86
BRD9-211ENST00000494422 DAPK1P53355 1430 aa9.71□□□□□ -0.86
BRD9-211ENST00000494422 ZFYVE16Q7Z3T8 1539 aa9.71□□□□□ -0.86
BRD9-211ENST00000494422 REREQ9P2R6 1566 aa9.71□□□□□ -0.86
BRD9-211ENST00000494422 FAM50AQ14320 339 aaKnown RBP9.7□□□□□ -0.86
BRD9-211ENST00000494422 ATP7AQ04656 1500 aa9.7□□□□□ -0.86
BRD9-211ENST00000494422 ARHGEF40Q8TER5 1519 aa9.7□□□□□ -0.86
BRD9-211ENST00000494422 INO80Q9ULG1 1556 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms