RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 NCOA1Q15788 1441 aa19.94■□□□□ 0.78
SMTN-219ENST00000493335 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
SMTN-219ENST00000493335 ZNF777Q9ULD5 760 aaPredicted RBP19.91■□□□□ 0.78
SMTN-219ENST00000493335 IPO9Q96P70 1041 aaKnown RBP19.91■□□□□ 0.78
SMTN-219ENST00000493335 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
SMTN-219ENST00000493335 ABCA10Q8WWZ4 1543 aa19.9■□□□□ 0.78
SMTN-219ENST00000493335 TOPBP1Q92547 1522 aa19.9■□□□□ 0.78
SMTN-219ENST00000493335 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
SMTN-219ENST00000493335 RTN4Q9NQC3 1192 aaKnown RBP19.88■□□□□ 0.77
SMTN-219ENST00000493335 KDM6BO15054 1643 aa19.88■□□□□ 0.77
SMTN-219ENST00000493335 KDM2AQ9Y2K7 1162 aa19.87■□□□□ 0.77
SMTN-219ENST00000493335 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
SMTN-219ENST00000493335 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
SMTN-219ENST00000493335 UBE2Q2Q8WVN8 375 aa19.83■□□□□ 0.77
SMTN-219ENST00000493335 MAGI3Q5TCQ9 1506 aa19.83■□□□□ 0.76
SMTN-219ENST00000493335 EHBP1L1Q8N3D4 1523 aa19.83■□□□□ 0.76
SMTN-219ENST00000493335 ANKRD30BQ9BXX2 1392 aa19.82■□□□□ 0.76
SMTN-219ENST00000493335 SMG6Q86US8 1419 aaKnown RBP19.81■□□□□ 0.76
SMTN-219ENST00000493335 EXOC6Q8TAG9 804 aa19.81■□□□□ 0.76
SMTN-219ENST00000493335 DNMBPQ6XZF7 1577 aa19.81■□□□□ 0.76
SMTN-219ENST00000493335 CDK13Q14004 1512 aaKnown RBP19.8■□□□□ 0.76
SMTN-219ENST00000493335 UGGT2Q9NYU1 1516 aa19.8■□□□□ 0.76
SMTN-219ENST00000493335 USP47Q96K76 1375 aa19.79■□□□□ 0.76
SMTN-219ENST00000493335 CTTNBP2Q8WZ74 1663 aa19.79■□□□□ 0.76
SMTN-219ENST00000493335 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
SMTN-219ENST00000493335 PKD2Q13563 968 aa19.78■□□□□ 0.76
SMTN-219ENST00000493335 CARD11Q9BXL7 1154 aa19.78■□□□□ 0.76
SMTN-219ENST00000493335 PRDM2Q13029 1718 aa19.78■□□□□ 0.76
SMTN-219ENST00000493335 PNISRQ8TF01 805 aaKnown RBP19.77■□□□□ 0.76
SMTN-219ENST00000493335 RPRD2Q5VT52 1461 aaKnown RBP19.76■□□□□ 0.75
SMTN-219ENST00000493335 NEFMP07197 916 aa19.75■□□□□ 0.75
SMTN-219ENST00000493335 CUL7Q14999 1698 aa19.75■□□□□ 0.75
SMTN-219ENST00000493335 SKAP1Q86WV1 359 aa19.75■□□□□ 0.75
SMTN-219ENST00000493335 LRRIQ1Q96JM4 1722 aa19.75■□□□□ 0.75
SMTN-219ENST00000493335 IL27Q8NEV9 243 aa19.75■□□□□ 0.75
SMTN-219ENST00000493335 DHX29Q7Z478 1369 aaKnown RBP19.73■□□□□ 0.75
SMTN-219ENST00000493335 SPATA31E1Q6ZUB1 1445 aa19.72■□□□□ 0.75
SMTN-219ENST00000493335 PLIN1O60240 522 aa19.72■□□□□ 0.75
SMTN-219ENST00000493335 CFDP1Q9UEE9 299 aaPredicted RBP19.71■□□□□ 0.75
SMTN-219ENST00000493335 HECW1Q76N89 1606 aa19.71■□□□□ 0.75
SMTN-219ENST00000493335 ST20-MTHFSA0A0A6YYL1 179 aa19.71■□□□□ 0.75
SMTN-219ENST00000493335 RRP1P56182 461 aaKnown RBP19.71■□□□□ 0.75
SMTN-219ENST00000493335 RCAN3Q9UKA8 241 aa19.71■□□□□ 0.75
SMTN-219ENST00000493335 EPRSP07814 1512 aaKnown RBP19.71■□□□□ 0.75
SMTN-219ENST00000493335 TEX14Q8IWB6 1497 aa19.69■□□□□ 0.74
SMTN-219ENST00000493335 DAPK1P53355 1430 aa19.69■□□□□ 0.74
SMTN-219ENST00000493335 PDE4AP27815 886 aa19.69■□□□□ 0.74
SMTN-219ENST00000493335 TCOF1Q13428 1488 aaKnown RBP19.68■□□□□ 0.74
SMTN-219ENST00000493335 URB2Q14146 1524 aaKnown RBP19.67■□□□□ 0.74
SMTN-219ENST00000493335 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.67■□□□□ 0.74
SMTN-219ENST00000493335 SAMD9Q5K651 1589 aa19.67■□□□□ 0.74
SMTN-219ENST00000493335 DCAF11Q8TEB1 546 aa19.66■□□□□ 0.74
SMTN-219ENST00000493335 CDCA7LQ96GN5 454 aa19.66■□□□□ 0.74
SMTN-219ENST00000493335 ABCC5O15440 1437 aa19.66■□□□□ 0.74
SMTN-219ENST00000493335 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
SMTN-219ENST00000493335 MIA2Q96PC5 1412 aa19.66■□□□□ 0.74
SMTN-219ENST00000493335 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.74
SMTN-219ENST00000493335 GCC2Q8IWJ2 1684 aa19.63■□□□□ 0.73
SMTN-219ENST00000493335 CC2D1BQ5T0F9 858 aaKnown RBP19.63■□□□□ 0.73
SMTN-219ENST00000493335 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
SMTN-219ENST00000493335 SLC4A3P48751 1232 aa19.62■□□□□ 0.73
SMTN-219ENST00000493335 RGL3Q3MIN7 710 aa19.62■□□□□ 0.73
SMTN-219ENST00000493335 TCERG1O14776 1098 aaKnown RBP19.62■□□□□ 0.73
SMTN-219ENST00000493335 MYBBP1AQ9BQG0 1328 aaKnown RBP19.6■□□□□ 0.73
SMTN-219ENST00000493335 KIF15Q9NS87 1388 aa19.59■□□□□ 0.73
SMTN-219ENST00000493335 DAXXQ9UER7 740 aaPredicted RBP19.58■□□□□ 0.73
SMTN-219ENST00000493335 NUP155O75694 1391 aa19.57■□□□□ 0.72
SMTN-219ENST00000493335 PDS5BQ9NTI5 1447 aa19.57■□□□□ 0.72
SMTN-219ENST00000493335 ROCK1Q13464 1354 aa19.57■□□□□ 0.72
SMTN-219ENST00000493335 FBLN2P98095 1184 aa19.56■□□□□ 0.72
SMTN-219ENST00000493335 BACH2Q9BYV9 841 aa19.56■□□□□ 0.72
SMTN-219ENST00000493335 CRBNQ96SW2 442 aa19.55■□□□□ 0.72
SMTN-219ENST00000493335 RALBP1Q15311 655 aa19.54■□□□□ 0.72
SMTN-219ENST00000493335 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
SMTN-219ENST00000493335 KIAA1107Q9UPP5 1409 aa19.53■□□□□ 0.72
SMTN-219ENST00000493335 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.72
SMTN-219ENST00000493335 BCORL1Q5H9F3 1711 aa19.52■□□□□ 0.72
SMTN-219ENST00000493335 NLRP13Q86W25 1043 aa19.52■□□□□ 0.72
SMTN-219ENST00000493335 PZPP20742 1482 aa19.52■□□□□ 0.72
SMTN-219ENST00000493335 ROCK2O75116 1388 aaKnown RBP19.51■□□□□ 0.71
SMTN-219ENST00000493335 BRD4O60885 1362 aaPredicted RBP19.5■□□□□ 0.71
SMTN-219ENST00000493335 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
SMTN-219ENST00000493335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.49■□□□□ 0.712e-7■■□□□ 11.7
SMTN-219ENST00000493335 PPM1GO15355 546 aaPredicted RBP19.48■□□□□ 0.71
SMTN-219ENST00000493335 ABCA5Q8WWZ7 1642 aa19.48■□□□□ 0.71
SMTN-219ENST00000493335 KTN1Q86UP2 1357 aaKnown RBP19.48■□□□□ 0.71
SMTN-219ENST00000493335 C20orf194Q5TEA3 1177 aa19.48■□□□□ 0.71
SMTN-219ENST00000493335 ARID4BQ4LE39 1312 aaPredicted RBP19.48■□□□□ 0.71
SMTN-219ENST00000493335 IQGAP2Q13576 1575 aa19.47■□□□□ 0.71
SMTN-219ENST00000493335 TSPY4P0CV99 314 aa19.47■□□□□ 0.71
SMTN-219ENST00000493335 TSPY10P0CW01 314 aa19.47■□□□□ 0.71
SMTN-219ENST00000493335 BRPF3Q9ULD4 1205 aa19.47■□□□□ 0.71
SMTN-219ENST00000493335 ANKRD30AQ9BXX3 1397 aa19.47■□□□□ 0.71
SMTN-219ENST00000493335 NBPF1Q3BBV0 1214 aa19.46■□□□□ 0.71
SMTN-219ENST00000493335 RGS3P49796 1198 aa19.46■□□□□ 0.71
SMTN-219ENST00000493335 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
SMTN-219ENST00000493335 LRPPRCP42704 1394 aaKnown RBP19.45■□□□□ 0.7
SMTN-219ENST00000493335 WDR62O43379 1518 aa19.44■□□□□ 0.7
SMTN-219ENST00000493335 MS4A1P11836 297 aa19.44■□□□□ 0.7
SMTN-219ENST00000493335 HNRNPMP52272 730 aaKnown RBP eCLIP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms