RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 MYOM3Q5VTT5 1437 aa28.3■■■□□ 2.12
PRDM2-209ENST00000491134 ARHGAP5Q13017 1502 aa28.27■■■□□ 2.12
PRDM2-209ENST00000491134 FANCAO15360 1455 aa28.27■■■□□ 2.12
PRDM2-209ENST00000491134 TEX14Q8IWB6 1497 aa28.27■■■□□ 2.12
PRDM2-209ENST00000491134 NEO1Q92859 1461 aa28.25■■■□□ 2.11
PRDM2-209ENST00000491134 MIA2Q96PC5 1412 aa28.24■■■□□ 2.11
PRDM2-209ENST00000491134 CFAP74Q9C0B2 1584 aa28.24■■■□□ 2.11
PRDM2-209ENST00000491134 EFCAB2Q5VUJ9 269 aa28.22■■■□□ 2.11
PRDM2-209ENST00000491134 SAMD9LQ8IVG5 1584 aa28.22■■■□□ 2.11
PRDM2-209ENST00000491134 FGD6Q6ZV73 1430 aa28.21■■■□□ 2.11
PRDM2-209ENST00000491134 CFDP1Q9UEE9 299 aaPredicted RBP28.21■■■□□ 2.11
PRDM2-209ENST00000491134 AKNAQ7Z591 1439 aa28.19■■■□□ 2.1
PRDM2-209ENST00000491134 ABCC1P33527 1531 aa28.16■■■□□ 2.1
PRDM2-209ENST00000491134 ZNF644Q9H582 1327 aaPredicted RBP28.16■■■□□ 2.1
PRDM2-209ENST00000491134 TCOF1Q13428 1488 aaKnown RBP28.15■■■□□ 2.1
PRDM2-209ENST00000491134 PTPN23Q9H3S7 1636 aa28.15■■■□□ 2.1
PRDM2-209ENST00000491134 ARHGEF12Q9NZN5 1544 aa28.14■■■□□ 2.1
PRDM2-209ENST00000491134 CAMSAP2Q08AD1 1489 aa28.14■■■□□ 2.09
PRDM2-209ENST00000491134 KIAA1107Q9UPP5 1409 aa28.12■■■□□ 2.09
PRDM2-209ENST00000491134 COL17A1Q9UMD9 1497 aaPredicted RBP28.12■■■□□ 2.09
PRDM2-209ENST00000491134 RRBP1Q9P2E9 1410 aaKnown RBP28.11■■■□□ 2.09
PRDM2-209ENST00000491134 ADGRL1O94910 1474 aa28.11■■■□□ 2.09
PRDM2-209ENST00000491134 PLEKHH2Q8IVE3 1493 aa28.1■■■□□ 2.09
PRDM2-209ENST00000491134 MBD5Q9P267 1494 aa28.09■■■□□ 2.09
PRDM2-209ENST00000491134 ZNF777Q9ULD5 760 aaPredicted RBP28.09■■■□□ 2.09
PRDM2-209ENST00000491134 SYCP2Q9BX26 1530 aa28.08■■■□□ 2.09
PRDM2-209ENST00000491134 SCAPERQ9BY12 1400 aa28.08■■■□□ 2.09
PRDM2-209ENST00000491134 RICTORQ6R327 1708 aa28.06■■■□□ 2.08
PRDM2-209ENST00000491134 FRMPD1Q5SYB0 1578 aa28.05■■■□□ 2.08
PRDM2-209ENST00000491134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.04■■■□□ 2.08
PRDM2-209ENST00000491134 ARHGEF5Q12774 1597 aa28.03■■■□□ 2.08
PRDM2-209ENST00000491134 DENND4BO75064 1496 aaPredicted RBP28.02■■■□□ 2.08
PRDM2-209ENST00000491134 POGZQ7Z3K3 1410 aa28.02■■■□□ 2.08
PRDM2-209ENST00000491134 TRAPPC8Q9Y2L5 1435 aa28.02■■■□□ 2.08
PRDM2-209ENST00000491134 KDM6BO15054 1643 aa28.01■■■□□ 2.07
PRDM2-209ENST00000491134 HNRNPMP52272 730 aaKnown RBP eCLIP28.01■■■□□ 2.07
PRDM2-209ENST00000491134 KDM5CP41229 1560 aa27.99■■■□□ 2.07
PRDM2-209ENST00000491134 DNMT1P26358 1616 aaKnown RBP27.98■■■□□ 2.07
PRDM2-209ENST00000491134 ZNF518AQ6AHZ1 1483 aa27.97■■■□□ 2.07
PRDM2-209ENST00000491134 RAPGEF3O95398 923 aa27.96■■■□□ 2.07
PRDM2-209ENST00000491134 CCDC141Q6ZP82 1450 aa27.95■■■□□ 2.07
PRDM2-209ENST00000491134 ZMYM4Q5VZL5 1548 aa27.95■■■□□ 2.06
PRDM2-209ENST00000491134 AFAP1Q8N556 730 aa27.94■■■□□ 2.06
PRDM2-209ENST00000491134 CROCC2H7BZ55 1655 aa27.94■■■□□ 2.06
PRDM2-209ENST00000491134 ABCC5O15440 1437 aa27.93■■■□□ 2.06
PRDM2-209ENST00000491134 FAM50AQ14320 339 aaKnown RBP27.93■■■□□ 2.06
PRDM2-209ENST00000491134 RSPH4AQ5TD94 716 aa27.92■■■□□ 2.06
PRDM2-209ENST00000491134 DAPK1P53355 1430 aa27.92■■■□□ 2.06
PRDM2-209ENST00000491134 MAST1Q9Y2H9 1570 aa27.89■■■□□ 2.05
PRDM2-209ENST00000491134 INO80Q9ULG1 1556 aaPredicted RBP27.88■■■□□ 2.05
PRDM2-209ENST00000491134 KIDINS220Q9ULH0 1771 aa27.88■■■□□ 2.05
PRDM2-209ENST00000491134 MLH3Q9UHC1 1453 aa27.88■■■□□ 2.05
PRDM2-209ENST00000491134 PTPRKQ15262 1439 aa27.87■■■□□ 2.05
PRDM2-209ENST00000491134 SHANK2Q9UPX8 1470 aa27.87■■■□□ 2.05
PRDM2-209ENST00000491134 HECW2Q9P2P5 1572 aa27.86■■■□□ 2.05
PRDM2-209ENST00000491134 ZFYVE16Q7Z3T8 1539 aa27.85■■■□□ 2.05
PRDM2-209ENST00000491134 RTEL1-TNFRSF6BF6WH68 1400 aa27.84■■■□□ 2.05
PRDM2-209ENST00000491134 MAGI2Q86UL8 1455 aa27.83■■■□□ 2.05
PRDM2-209ENST00000491134 C9orf84Q5VXU9 1444 aa27.82■■■□□ 2.04
PRDM2-209ENST00000491134 ATP7AQ04656 1500 aa27.82■■■□□ 2.04
PRDM2-209ENST00000491134 SPAG9O60271 1321 aaKnown RBP27.81■■■□□ 2.04
PRDM2-209ENST00000491134 ABCA6Q8N139 1617 aa27.78■■■□□ 2.04
PRDM2-209ENST00000491134 ADGRL2O95490 1459 aa27.78■■■□□ 2.04
PRDM2-209ENST00000491134 YEATS2Q9ULM3 1422 aa27.78■■■□□ 2.04
PRDM2-209ENST00000491134 TSPY4P0CV99 314 aa27.77■■■□□ 2.04
PRDM2-209ENST00000491134 TSPY10P0CW01 314 aa27.77■■■□□ 2.04
PRDM2-209ENST00000491134 ADGBQ8N7X0 1667 aa27.77■■■□□ 2.04
PRDM2-209ENST00000491134 PLXNC1O60486 1568 aa27.77■■■□□ 2.04
PRDM2-209ENST00000491134 ARHGEF40Q8TER5 1519 aa27.77■■■□□ 2.04
PRDM2-209ENST00000491134 DIP2CQ9Y2E4 1556 aa27.76■■■□□ 2.03
PRDM2-209ENST00000491134 NCOA1Q15788 1441 aa27.73■■■□□ 2.03
PRDM2-209ENST00000491134 ROCK1Q13464 1354 aa27.72■■■□□ 2.03
PRDM2-209ENST00000491134 ITGAEP38570 1179 aa27.7■■■□□ 2.02
PRDM2-209ENST00000491134 CHIC2Q9UKJ5 165 aa27.7■■■□□ 2.02
PRDM2-209ENST00000491134 ATP10AO60312 1499 aa27.68■■■□□ 2.02
PRDM2-209ENST00000491134 REREQ9P2R6 1566 aa27.68■■■□□ 2.02
PRDM2-209ENST00000491134 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
PRDM2-209ENST00000491134 SIGLEC1Q9BZZ2 1709 aa27.67■■■□□ 2.02
PRDM2-209ENST00000491134 ANKRD30AQ9BXX3 1397 aa27.66■■■□□ 2.02
PRDM2-209ENST00000491134 KIF15Q9NS87 1388 aa27.62■■■□□ 2.01
PRDM2-209ENST00000491134 A2MP01023 1474 aa27.62■■■□□ 2.01
PRDM2-209ENST00000491134 DUOX2Q9NRD8 1548 aa27.62■■■□□ 2.01
PRDM2-209ENST00000491134 MYT1LQ9UL68 1186 aa27.61■■■□□ 2.01
PRDM2-209ENST00000491134 DHX29Q7Z478 1369 aaKnown RBP27.6■■■□□ 2.01
PRDM2-209ENST00000491134 RRP7BPQ9NSQ0 103 aa27.6■■■□□ 2.01
PRDM2-209ENST00000491134 GCC2Q8IWJ2 1684 aa27.59■■■□□ 2.01
PRDM2-209ENST00000491134 NAIPQ13075 1403 aa27.58■■■□□ 2.01
PRDM2-209ENST00000491134 HFM1A2PYH4 1435 aa27.58■■■□□ 2
PRDM2-209ENST00000491134 AGLP35573 1532 aa27.57■■■□□ 2
PRDM2-209ENST00000491134 BCORL1Q5H9F3 1711 aa27.57■■■□□ 2
PRDM2-209ENST00000491134 ERBINQ96RT1 1412 aa27.54■■■□□ 2
PRDM2-209ENST00000491134 EIF2AK4Q9P2K8 1649 aaKnown RBP27.53■■■□□ 2
PRDM2-209ENST00000491134 ANKRD50Q9ULJ7 1429 aa27.51■■□□□ 1.99
PRDM2-209ENST00000491134 RNF17Q9BXT8 1623 aaKnown RBP27.46■■□□□ 1.99
PRDM2-209ENST00000491134 DEPDC5O75140 1603 aa27.45■■□□□ 1.99
PRDM2-209ENST00000491134 MROH1Q8NDA8 1641 aa27.45■■□□□ 1.98
PRDM2-209ENST00000491134 SETD5Q9C0A6 1442 aa27.43■■□□□ 1.98
PRDM2-209ENST00000491134 KIF3BO15066 747 aa27.4■■□□□ 1.98
PRDM2-209ENST00000491134 UNC13BO14795 1591 aa27.39■■□□□ 1.98
PRDM2-209ENST00000491134 PRDM15P57071 1507 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms