RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
FNDC3B-211ENST00000490832 COLQQ9Y215 455 aaPredicted RBP15.64■□□□□ 0.09
FNDC3B-211ENST00000490832 BOLA1Q9Y3E2 137 aa15.64■□□□□ 0.09
FNDC3B-211ENST00000490832 L3MBTL3Q96JM7 780 aaPredicted RBP15.63■□□□□ 0.09
FNDC3B-211ENST00000490832 PDE4AP27815 886 aa15.61■□□□□ 0.09
FNDC3B-211ENST00000490832 BCANQ96GW7 911 aa15.6■□□□□ 0.09
FNDC3B-211ENST00000490832 CRISPLD2Q9H0B8 497 aa15.6■□□□□ 0.09
FNDC3B-211ENST00000490832 NCKAP5LQ9HCH0 1330 aa15.6■□□□□ 0.09
FNDC3B-211ENST00000490832 POTEFA5A3E0 1075 aa15.59■□□□□ 0.09
FNDC3B-211ENST00000490832 TMEM121BQ9BXQ6 578 aaPredicted RBP15.59■□□□□ 0.09
FNDC3B-211ENST00000490832 P3H3Q8IVL6 736 aa15.57■□□□□ 0.08
FNDC3B-211ENST00000490832 LARP6Q9BRS8 491 aaKnown RBP15.55■□□□□ 0.08
FNDC3B-211ENST00000490832 MFSD10Q14728 455 aa15.53■□□□□ 0.08
FNDC3B-211ENST00000490832 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
FNDC3B-211ENST00000490832 DDX27Q96GQ7 796 aaKnown RBP15.52■□□□□ 0.08
FNDC3B-211ENST00000490832 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
FNDC3B-211ENST00000490832 GPHNQ9NQX3 736 aaPredicted RBP15.5■□□□□ 0.07
FNDC3B-211ENST00000490832 TMC2Q8TDI7 906 aa15.48■□□□□ 0.07
FNDC3B-211ENST00000490832 E2F4Q16254 413 aa15.47■□□□□ 0.07
FNDC3B-211ENST00000490832 KCNV2Q8TDN2 545 aa15.46■□□□□ 0.07
FNDC3B-211ENST00000490832 NBR1Q14596 966 aa15.45■□□□□ 0.06
FNDC3B-211ENST00000490832 PPP1R15BQ5SWA1 713 aa15.43■□□□□ 0.06
FNDC3B-211ENST00000490832 C3orf67Q6ZVT6 689 aa15.43■□□□□ 0.06
FNDC3B-211ENST00000490832 KIF3CO14782 793 aa15.4■□□□□ 0.06
FNDC3B-211ENST00000490832 C2orf72A6NCS6 295 aa15.39■□□□□ 0.05
FNDC3B-211ENST00000490832 FOXK1P85037 733 aa15.39■□□□□ 0.05
FNDC3B-211ENST00000490832 DSG2Q14126 1118 aa15.38■□□□□ 0.05
FNDC3B-211ENST00000490832 CAMK2BQ13554 666 aa15.36■□□□□ 0.05
FNDC3B-211ENST00000490832 TMEM92Q6UXU6 159 aa15.36■□□□□ 0.05
FNDC3B-211ENST00000490832 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
FNDC3B-211ENST00000490832 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
FNDC3B-211ENST00000490832 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
FNDC3B-211ENST00000490832 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.33■□□□□ 0.04
FNDC3B-211ENST00000490832 PLPP6Q8IY26 295 aa15.31■□□□□ 0.04
FNDC3B-211ENST00000490832 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
FNDC3B-211ENST00000490832 ARIH1Q9Y4X5 557 aaPredicted RBP15.3■□□□□ 0.04
FNDC3B-211ENST00000490832 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
FNDC3B-211ENST00000490832 POTEB2H3BUK9 544 aa15.24■□□□□ 0.03
FNDC3B-211ENST00000490832 POTEJP0CG39 1038 aa15.22■□□□□ 0.03
FNDC3B-211ENST00000490832 EMILIN3Q9NT22 766 aa15.22■□□□□ 0.03
FNDC3B-211ENST00000490832 MAMSTRQ6ZN01 415 aa15.2■□□□□ 0.02
FNDC3B-211ENST00000490832 SCUBE2Q9NQ36 999 aa15.2■□□□□ 0.02
FNDC3B-211ENST00000490832 DPYSL4O14531 572 aa15.16■□□□□ 0.02
FNDC3B-211ENST00000490832 SEMA3EO15041 775 aa15.12■□□□□ 0.01
FNDC3B-211ENST00000490832 SPDYE16A6NNV3 312 aaPredicted RBP15.11■□□□□ 0.01
FNDC3B-211ENST00000490832 TULP1O00294 542 aaPredicted RBP15.11■□□□□ 0.01
FNDC3B-211ENST00000490832 MAP3K9P80192 1104 aa15.11■□□□□ 0.01
FNDC3B-211ENST00000490832 PDIA6Q15084 440 aa15.11■□□□□ 0.01
FNDC3B-211ENST00000490832 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
FNDC3B-211ENST00000490832 OXER1Q8TDS5 423 aa15.11■□□□□ 0.01
FNDC3B-211ENST00000490832 UPF1Q92900 1129 aaKnown RBP eCLIP15.11■□□□□ 0.01
FNDC3B-211ENST00000490832 TESPA1A2RU30 521 aaPredicted RBP15.1■□□□□ 0.01
FNDC3B-211ENST00000490832 SLC34A2O95436 690 aa15.1■□□□□ 0.01
FNDC3B-211ENST00000490832 PTCD2Q8WV60 388 aaKnown RBP15.07■□□□□ 0
FNDC3B-211ENST00000490832 TBC1D12O60347 775 aa15.05■□□□□ -0
FNDC3B-211ENST00000490832 SMYD5Q6GMV2 418 aa15.04■□□□□ -0
FNDC3B-211ENST00000490832 ZNF316A6NFI3 1004 aaPredicted RBP15□□□□□ -0.01
FNDC3B-211ENST00000490832 DOK7Q18PE1 504 aa15□□□□□ -0.01
FNDC3B-211ENST00000490832 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15□□□□□ -0.01
FNDC3B-211ENST00000490832 TPRNQ4KMQ1 711 aa14.99□□□□□ -0.01
FNDC3B-211ENST00000490832 LMOD2Q6P5Q4 547 aa14.99□□□□□ -0.01
FNDC3B-211ENST00000490832 LHX8Q68G74 356 aa14.98□□□□□ -0.01
FNDC3B-211ENST00000490832 EVI5O60447 810 aa14.97□□□□□ -0.01
FNDC3B-211ENST00000490832 MLLT3P42568 568 aaPredicted RBP14.96□□□□□ -0.01
FNDC3B-211ENST00000490832 PCDHGA4Q9Y5G9 962 aa14.96□□□□□ -0.01
FNDC3B-211ENST00000490832 RIMBP2O15034 1052 aa14.95□□□□□ -0.02
FNDC3B-211ENST00000490832 HOXB3P14651 431 aaPredicted RBP14.94□□□□□ -0.02
FNDC3B-211ENST00000490832 OTUD5Q96G74 571 aa14.94□□□□□ -0.02
FNDC3B-211ENST00000490832 PTGER2P43116 358 aa14.92□□□□□ -0.02
FNDC3B-211ENST00000490832 ZSWIM6Q9HCJ5 1215 aa14.92□□□□□ -0.02
FNDC3B-211ENST00000490832 SNPHO15079 494 aa14.91□□□□□ -0.02
FNDC3B-211ENST00000490832 PRKCSHP14314 528 aaPredicted RBP14.9□□□□□ -0.02
FNDC3B-211ENST00000490832 ZNF710Q8N1W2 664 aa14.89□□□□□ -0.03
FNDC3B-211ENST00000490832 ANO8Q9HCE9 1232 aaPredicted RBP14.89□□□□□ -0.03
FNDC3B-211ENST00000490832 GRXCR2A6NFK2 248 aa14.87□□□□□ -0.03
FNDC3B-211ENST00000490832 DDX12PQ92771 950 aa14.85□□□□□ -0.03
FNDC3B-211ENST00000490832 ARSIQ5FYB1 569 aa14.83□□□□□ -0.04
FNDC3B-211ENST00000490832 KDM4FA0A1W2PPD8 638 aa14.82□□□□□ -0.04
FNDC3B-211ENST00000490832 GPR153Q6NV75 609 aa14.82□□□□□ -0.04
FNDC3B-211ENST00000490832 RBM26Q5T8P6 1007 aaKnown RBP14.81□□□□□ -0.04
FNDC3B-211ENST00000490832 NUDT7P0C024 238 aa14.8□□□□□ -0.04
FNDC3B-211ENST00000490832 PHF14O94880 888 aa14.79□□□□□ -0.04
FNDC3B-211ENST00000490832 OSBPP22059 807 aa14.79□□□□□ -0.04
FNDC3B-211ENST00000490832 GPIHBP1Q8IV16 184 aa14.79□□□□□ -0.04
FNDC3B-211ENST00000490832 KHSRPQ92945 711 aaKnown RBP eCLIP14.79□□□□□ -0.04
FNDC3B-211ENST00000490832 ZC3H15Q8WU90 426 aaKnown RBP14.77□□□□□ -0.05
FNDC3B-211ENST00000490832 EPAS1Q99814 870 aa14.77□□□□□ -0.05
FNDC3B-211ENST00000490832 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
FNDC3B-211ENST00000490832 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
FNDC3B-211ENST00000490832 SMARCA4P51532 1647 aa14.75□□□□□ -0.05
FNDC3B-211ENST00000490832 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
FNDC3B-211ENST00000490832 HOXB1P14653 301 aaPredicted RBP14.73□□□□□ -0.05
FNDC3B-211ENST00000490832 TYW1BQ6NUM6 668 aa14.72□□□□□ -0.05
FNDC3B-211ENST00000490832 PCDHGA10Q9Y5H3 936 aa14.72□□□□□ -0.05
FNDC3B-211ENST00000490832 FOSBP53539 338 aa14.71□□□□□ -0.05
FNDC3B-211ENST00000490832 EN1Q05925 392 aaPredicted RBP14.7□□□□□ -0.06
FNDC3B-211ENST00000490832 FBXW7Q969H0 707 aa14.7□□□□□ -0.06
FNDC3B-211ENST00000490832 ZNF454Q8N9F8 522 aa14.69□□□□□ -0.06
FNDC3B-211ENST00000490832 NUTM2FA1L443 756 aa14.68□□□□□ -0.06
FNDC3B-211ENST00000490832 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms