RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 AEBP2Q6ZN18 517 aaPredicted RBP32.22■■■□□ 2.75
FNDC3B-211ENST00000490832 CHIC1Q5VXU3 224 aa31.82■■■□□ 2.68
FNDC3B-211ENST00000490832 PHF23Q9BUL5 403 aaPredicted RBP27.97■■■□□ 2.07
FNDC3B-211ENST00000490832 SENP3Q9H4L4 574 aaPredicted RBP27.37■■□□□ 1.97
FNDC3B-211ENST00000490832 PLPPR3Q6T4P5 718 aa26.01■■□□□ 1.75
FNDC3B-211ENST00000490832 FOXD1Q16676 465 aa25.31■■□□□ 1.64
FNDC3B-211ENST00000490832 ADRA2BP18089 450 aa24.57■■□□□ 1.52
FNDC3B-211ENST00000490832 PPP6R1Q9UPN7 881 aa24.56■■□□□ 1.52
FNDC3B-211ENST00000490832 PIAS4Q8N2W9 510 aaPredicted RBP23.98■■□□□ 1.43
FNDC3B-211ENST00000490832 MSH5O43196 834 aa23.29■■□□□ 1.32
FNDC3B-211ENST00000490832 PPP4R3CPQ6ZMV5 832 aa22.92■■□□□ 1.26
FNDC3B-211ENST00000490832 KCNA4P22459 653 aa22.71■■□□□ 1.23
FNDC3B-211ENST00000490832 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
FNDC3B-211ENST00000490832 NCBP3Q53F19 620 aaKnown RBP22.46■■□□□ 1.19
FNDC3B-211ENST00000490832 CNKSR2Q8WXI2 1034 aa22.24■■□□□ 1.15
FNDC3B-211ENST00000490832 MAPK8IP2Q13387 824 aaPredicted RBP22.18■■□□□ 1.14
FNDC3B-211ENST00000490832 NPM3O75607 178 aaKnown RBP22.08■■□□□ 1.13
FNDC3B-211ENST00000490832 DMRT2Q9Y5R5 561 aa21.88■■□□□ 1.09
FNDC3B-211ENST00000490832 RNF216Q9NWF9 866 aaPredicted RBP21.73■■□□□ 1.07
FNDC3B-211ENST00000490832 SLC4A1APQ9BWU0 796 aaKnown RBP21.72■■□□□ 1.07
FNDC3B-211ENST00000490832 HOXD11P31277 338 aaPredicted RBP21.55■■□□□ 1.04
FNDC3B-211ENST00000490832 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
FNDC3B-211ENST00000490832 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
FNDC3B-211ENST00000490832 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
FNDC3B-211ENST00000490832 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
FNDC3B-211ENST00000490832 ZBTB22O15209 634 aa20.89■□□□□ 0.93
FNDC3B-211ENST00000490832 FOXD4L1Q9NU39 408 aa20.86■□□□□ 0.93
FNDC3B-211ENST00000490832 SLC4A2P04920 1241 aa20.75■□□□□ 0.91
FNDC3B-211ENST00000490832 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
FNDC3B-211ENST00000490832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.888e-10■□□□□ 10.9
FNDC3B-211ENST00000490832 MYCNP04198 464 aaPredicted RBP20.44■□□□□ 0.86
FNDC3B-211ENST00000490832 U3KPZ7 1027 aaPredicted RBP20.22■□□□□ 0.83
FNDC3B-211ENST00000490832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
FNDC3B-211ENST00000490832 HNRNPUL2Q1KMD3 747 aaKnown RBP20.15■□□□□ 0.82
FNDC3B-211ENST00000490832 ATXN8OSP0DMR3 200 aa20.13■□□□□ 0.81
FNDC3B-211ENST00000490832 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
FNDC3B-211ENST00000490832 RNF39Q9H2S5 420 aa19.95■□□□□ 0.78
FNDC3B-211ENST00000490832 APLP2Q06481 763 aa19.88■□□□□ 0.77
FNDC3B-211ENST00000490832 ATF5Q9Y2D1 282 aaPredicted RBP19.79■□□□□ 0.76
FNDC3B-211ENST00000490832 C1QBPQ07021 282 aaKnown RBP19.75■□□□□ 0.75
FNDC3B-211ENST00000490832 SPINK5Q9NQ38 1064 aaPredicted RBP19.55■□□□□ 0.72
FNDC3B-211ENST00000490832 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
FNDC3B-211ENST00000490832 CAPN15O75808 1086 aa19.49■□□□□ 0.71
FNDC3B-211ENST00000490832 TRHP20396 242 aaPredicted RBP19.46■□□□□ 0.71
FNDC3B-211ENST00000490832 CACNB1Q02641 598 aaPredicted RBP19.21■□□□□ 0.67
FNDC3B-211ENST00000490832 POLA2Q14181 598 aa19.2■□□□□ 0.66
FNDC3B-211ENST00000490832 ABCB7O75027 752 aa19.12■□□□□ 0.65
FNDC3B-211ENST00000490832 DSG3P32926 999 aa19.08■□□□□ 0.64
FNDC3B-211ENST00000490832 FBLN2P98095 1184 aa19.02■□□□□ 0.64
FNDC3B-211ENST00000490832 FKBP8Q14318 412 aa19.02■□□□□ 0.64
FNDC3B-211ENST00000490832 ZBTB12Q9Y330 459 aaPredicted RBP19■□□□□ 0.63
FNDC3B-211ENST00000490832 MKRN4PQ13434 485 aaPredicted RBP18.96■□□□□ 0.63
FNDC3B-211ENST00000490832 NISCHQ9Y2I1 1504 aa18.88■□□□□ 0.61
FNDC3B-211ENST00000490832 SPDYE4A6NLX3 237 aa18.72■□□□□ 0.59
FNDC3B-211ENST00000490832 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
FNDC3B-211ENST00000490832 SPDYE2BA6NHP3 402 aa18.48■□□□□ 0.55
FNDC3B-211ENST00000490832 SPDYE6P0CI01 402 aa18.48■□□□□ 0.55
FNDC3B-211ENST00000490832 SPDYE2Q495Y8 402 aa18.48■□□□□ 0.55
FNDC3B-211ENST00000490832 PROM2Q8N271 834 aa18.46■□□□□ 0.55
FNDC3B-211ENST00000490832 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
FNDC3B-211ENST00000490832 SSUH2Q9Y2M2 353 aa18.35■□□□□ 0.53
FNDC3B-211ENST00000490832 FBXO3Q9UK99 471 aa18.31■□□□□ 0.52
FNDC3B-211ENST00000490832 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
FNDC3B-211ENST00000490832 PABPN1Q86U42 306 aaKnown RBP eCLIP18.19■□□□□ 0.5
FNDC3B-211ENST00000490832 AKT1S1Q96B36 256 aa18.05■□□□□ 0.48
FNDC3B-211ENST00000490832 VASPP50552 380 aaPredicted RBP18.02■□□□□ 0.48
FNDC3B-211ENST00000490832 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
FNDC3B-211ENST00000490832 AMER1Q5JTC6 1135 aaPredicted RBP17.92■□□□□ 0.46
FNDC3B-211ENST00000490832 SPDYE1Q8NFV5 336 aaPredicted RBP17.86■□□□□ 0.45
FNDC3B-211ENST00000490832 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
FNDC3B-211ENST00000490832 RTN4Q9NQC3 1192 aaKnown RBP17.8■□□□□ 0.44
FNDC3B-211ENST00000490832 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
FNDC3B-211ENST00000490832 PLCD3Q8N3E9 789 aa17.74■□□□□ 0.43
FNDC3B-211ENST00000490832 CLEC11AQ9Y240 323 aa17.73■□□□□ 0.43
FNDC3B-211ENST00000490832 MIER1Q8N108 512 aa17.7■□□□□ 0.42
FNDC3B-211ENST00000490832 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
FNDC3B-211ENST00000490832 PITPNM1O00562 1244 aa17.64■□□□□ 0.41
FNDC3B-211ENST00000490832 PRR29P0C7W0 189 aa17.63■□□□□ 0.41
FNDC3B-211ENST00000490832 KLHL34Q8N239 644 aa17.63■□□□□ 0.41
FNDC3B-211ENST00000490832 ZBTB47Q9UFB7 747 aaPredicted RBP17.57■□□□□ 0.4
FNDC3B-211ENST00000490832 SPOCK2Q92563 424 aa17.54■□□□□ 0.4
FNDC3B-211ENST00000490832 CREBZFQ9NS37 354 aa17.45■□□□□ 0.38
FNDC3B-211ENST00000490832 MNX1P50219 401 aaPredicted RBP17.3■□□□□ 0.36
FNDC3B-211ENST00000490832 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
FNDC3B-211ENST00000490832 PKD2Q13563 968 aa17.28■□□□□ 0.36
FNDC3B-211ENST00000490832 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.352e-11■■□□□ 11.5
FNDC3B-211ENST00000490832 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
FNDC3B-211ENST00000490832 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
FNDC3B-211ENST00000490832 NUBP1P53384 320 aa17.22■□□□□ 0.35
FNDC3B-211ENST00000490832 PRKAR2AP13861 404 aaKnown RBP17.2■□□□□ 0.34
FNDC3B-211ENST00000490832 CIZ1Q9ULV3 898 aaPredicted RBP17.2■□□□□ 0.34
FNDC3B-211ENST00000490832 ECM2O94769 699 aaPredicted RBP17.16■□□□□ 0.34
FNDC3B-211ENST00000490832 GSE1Q14687 1217 aa17.16■□□□□ 0.34
FNDC3B-211ENST00000490832 PIP4P2Q8N4L2 257 aa17.15■□□□□ 0.34
FNDC3B-211ENST00000490832 FARP1Q9Y4F1 1045 aaPredicted RBP17.14■□□□□ 0.33
FNDC3B-211ENST00000490832 FAM212AQ96EL1 285 aa17.12■□□□□ 0.33
FNDC3B-211ENST00000490832 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
FNDC3B-211ENST00000490832 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
FNDC3B-211ENST00000490832 RASEFQ8IZ41 740 aa17.07■□□□□ 0.32
FNDC3B-211ENST00000490832 ABCC9O60706 1549 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms