RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	RRBP1	Q9P2E9	1410 aa	Known RBP	28.12	■■■□□ 2.09
PNCK-231	ENST00000488994	TTC37	Q6PGP7	1564 aa		28.09	■■■□□ 2.09
PNCK-231	ENST00000488994	CCNB3	Q8WWL7	1395 aa		28.07	■■■□□ 2.08
PNCK-231	ENST00000488994	FRMPD1	Q5SYB0	1578 aa		28.05	■■■□□ 2.08
PNCK-231	ENST00000488994	FANCA	O15360	1455 aa		28.04	■■■□□ 2.08
PNCK-231	ENST00000488994	MYOM3	Q5VTT5	1437 aa		28.04	■■■□□ 2.08
PNCK-231	ENST00000488994	CFAP74	Q9C0B2	1584 aa		28.04	■■■□□ 2.08
PNCK-231	ENST00000488994	AKNA	Q7Z591	1439 aa		28.03	■■■□□ 2.08
PNCK-231	ENST00000488994	RAPGEF3	O95398	923 aa		28.02	■■■□□ 2.08
PNCK-231	ENST00000488994	PLCH2	O75038	1416 aa		28.02	■■■□□ 2.08
PNCK-231	ENST00000488994	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28	■■■□□ 2.07	4e-7	■■■■■ 44.8
PNCK-231	ENST00000488994	DENND4B	O75064	1496 aa	Predicted RBP	27.98	■■■□□ 2.07
PNCK-231	ENST00000488994	FGD6	Q6ZV73	1430 aa		27.98	■■■□□ 2.07
PNCK-231	ENST00000488994	MIA2	Q96PC5	1412 aa		27.98	■■■□□ 2.07
PNCK-231	ENST00000488994	RICTOR	Q6R327	1708 aa		27.96	■■■□□ 2.07
PNCK-231	ENST00000488994	GPATCH8	Q9UKJ3	1502 aa	Known RBP	27.94	■■■□□ 2.06
PNCK-231	ENST00000488994	ZMYM4	Q5VZL5	1548 aa		27.93	■■■□□ 2.06
PNCK-231	ENST00000488994	MYO5C	Q9NQX4	1742 aa		27.91	■■■□□ 2.06
PNCK-231	ENST00000488994	CDC42BPA	Q5VT25	1732 aa		27.9	■■■□□ 2.06
PNCK-231	ENST00000488994	FAM50A	Q14320	339 aa	Known RBP	27.9	■■■□□ 2.06
PNCK-231	ENST00000488994	CDC42BPB	Q9Y5S2	1711 aa		27.89	■■■□□ 2.06
PNCK-231	ENST00000488994	ARHGEF40	Q8TER5	1519 aa		27.89	■■■□□ 2.05
PNCK-231	ENST00000488994	MAGI2	Q86UL8	1455 aa		27.87	■■■□□ 2.05
PNCK-231	ENST00000488994	PREX2	Q70Z35	1606 aa		27.87	■■■□□ 2.05
PNCK-231	ENST00000488994	ITSN2	Q9NZM3	1697 aa		27.86	■■■□□ 2.05
PNCK-231	ENST00000488994	EFCAB2	Q5VUJ9	269 aa		27.86	■■■□□ 2.05
PNCK-231	ENST00000488994	CFDP1	Q9UEE9	299 aa	Predicted RBP	27.86	■■■□□ 2.05
PNCK-231	ENST00000488994	POGZ	Q7Z3K3	1410 aa		27.86	■■■□□ 2.05
PNCK-231	ENST00000488994	SCAPER	Q9BY12	1400 aa		27.84	■■■□□ 2.05
PNCK-231	ENST00000488994	TCOF1	Q13428	1488 aa	Known RBP	27.84	■■■□□ 2.05
PNCK-231	ENST00000488994	PTPN23	Q9H3S7	1636 aa		27.83	■■■□□ 2.05
PNCK-231	ENST00000488994	ARHGAP5	Q13017	1502 aa		27.83	■■■□□ 2.05
PNCK-231	ENST00000488994	ADAMTSL3	P82987	1691 aa		27.82	■■■□□ 2.04
PNCK-231	ENST00000488994	ZFYVE16	Q7Z3T8	1539 aa		27.77	■■■□□ 2.04
PNCK-231	ENST00000488994	BCORL1	Q5H9F3	1711 aa		27.76	■■■□□ 2.03
PNCK-231	ENST00000488994	YEATS2	Q9ULM3	1422 aa		27.76	■■■□□ 2.03
PNCK-231	ENST00000488994	ZNF644	Q9H582	1327 aa	Predicted RBP	27.73	■■■□□ 2.03
PNCK-231	ENST00000488994	ZNF518A	Q6AHZ1	1483 aa		27.73	■■■□□ 2.03
PNCK-231	ENST00000488994	SAMD9L	Q8IVG5	1584 aa		27.73	■■■□□ 2.03
PNCK-231	ENST00000488994	ARHGEF12	Q9NZN5	1544 aa		27.72	■■■□□ 2.03
PNCK-231	ENST00000488994	KDM5C	P41229	1560 aa		27.72	■■■□□ 2.03
PNCK-231	ENST00000488994	ITGAE	P38570	1179 aa		27.72	■■■□□ 2.03
PNCK-231	ENST00000488994	ZNF777	Q9ULD5	760 aa	Predicted RBP	27.71	■■■□□ 2.03
PNCK-231	ENST00000488994	PTPRM	P28827	1452 aa		27.7	■■■□□ 2.02
PNCK-231	ENST00000488994	ABCC1	P33527	1531 aa		27.69	■■■□□ 2.02
PNCK-231	ENST00000488994	CAMSAP2	Q08AD1	1489 aa		27.68	■■■□□ 2.02
PNCK-231	ENST00000488994	KIAA1107	Q9UPP5	1409 aa		27.68	■■■□□ 2.02
PNCK-231	ENST00000488994	ATP10A	O60312	1499 aa		27.66	■■■□□ 2.02
PNCK-231	ENST00000488994	ARID4B	Q4LE39	1312 aa	Predicted RBP	27.65	■■■□□ 2.02
PNCK-231	ENST00000488994	SIGLEC1	Q9BZZ2	1709 aa		27.65	■■■□□ 2.02
PNCK-231	ENST00000488994	RSPH4A	Q5TD94	716 aa		27.65	■■■□□ 2.02
PNCK-231	ENST00000488994	PLEKHH2	Q8IVE3	1493 aa		27.64	■■■□□ 2.02
PNCK-231	ENST00000488994	HECW2	Q9P2P5	1572 aa		27.64	■■■□□ 2.02
PNCK-231	ENST00000488994	HNRNPM	P52272	730 aa	Known RBP eCLIP	27.64	■■■□□ 2.02	1e-10	■■■■□ 19.4
PNCK-231	ENST00000488994	TRAPPC8	Q9Y2L5	1435 aa		27.64	■■■□□ 2.01
PNCK-231	ENST00000488994	MADD	Q8WXG6	1647 aa		27.63	■■■□□ 2.01
PNCK-231	ENST00000488994	AFAP1	Q8N556	730 aa		27.63	■■■□□ 2.01
PNCK-231	ENST00000488994	MBD5	Q9P267	1494 aa		27.63	■■■□□ 2.01
PNCK-231	ENST00000488994	C9orf84	Q5VXU9	1444 aa		27.62	■■■□□ 2.01
PNCK-231	ENST00000488994	MLH3	Q9UHC1	1453 aa		27.62	■■■□□ 2.01
PNCK-231	ENST00000488994	SYCP2	Q9BX26	1530 aa		27.61	■■■□□ 2.01
PNCK-231	ENST00000488994	DAPK1	P53355	1430 aa		27.6	■■■□□ 2.01
PNCK-231	ENST00000488994	DNMT1	P26358	1616 aa	Known RBP	27.58	■■■□□ 2.01
PNCK-231	ENST00000488994	RERE	Q9P2R6	1566 aa		27.57	■■■□□ 2
PNCK-231	ENST00000488994	ABCC5	O15440	1437 aa		27.57	■■■□□ 2
PNCK-231	ENST00000488994	PTPRK	Q15262	1439 aa		27.55	■■■□□ 2
PNCK-231	ENST00000488994	ARHGEF5	Q12774	1597 aa		27.54	■■■□□ 2
PNCK-231	ENST00000488994	HRC	P23327	699 aa		27.53	■■■□□ 2
PNCK-231	ENST00000488994	SETD5	Q9C0A6	1442 aa		27.53	■■■□□ 2
PNCK-231	ENST00000488994	DIP2C	Q9Y2E4	1556 aa		27.53	■■■□□ 2
PNCK-231	ENST00000488994	ROCK1	Q13464	1354 aa		27.53	■■■□□ 2
PNCK-231	ENST00000488994	TSPY4	P0CV99	314 aa		27.52	■■■□□ 2
PNCK-231	ENST00000488994	TSPY10	P0CW01	314 aa		27.52	■■■□□ 2
PNCK-231	ENST00000488994	HFM1	A2PYH4	1435 aa		27.5	■■□□□ 1.99
PNCK-231	ENST00000488994	RIMS1	Q86UR5	1692 aa	Known RBP	27.49	■■□□□ 1.99
PNCK-231	ENST00000488994	SHANK2	Q9UPX8	1470 aa		27.49	■■□□□ 1.99
PNCK-231	ENST00000488994	CCDC141	Q6ZP82	1450 aa		27.48	■■□□□ 1.99
PNCK-231	ENST00000488994	ABCA6	Q8N139	1617 aa		27.48	■■□□□ 1.99
PNCK-231	ENST00000488994	AGL	P35573	1532 aa		27.48	■■□□□ 1.99
PNCK-231	ENST00000488994	ACIN1	Q9UKV3	1341 aa	Known RBP	27.47	■■□□□ 1.99
PNCK-231	ENST00000488994	CHIC2	Q9UKJ5	165 aa		27.46	■■□□□ 1.99
PNCK-231	ENST00000488994	KIDINS220	Q9ULH0	1771 aa		27.46	■■□□□ 1.99
PNCK-231	ENST00000488994	SPAG9	O60271	1321 aa	Known RBP	27.43	■■□□□ 1.98
PNCK-231	ENST00000488994	ANKRD30A	Q9BXX3	1397 aa		27.43	■■□□□ 1.98
PNCK-231	ENST00000488994	RAB3GAP2	Q9H2M9	1393 aa		27.43	■■□□□ 1.98
PNCK-231	ENST00000488994	ADGRL2	O95490	1459 aa		27.43	■■□□□ 1.98
PNCK-231	ENST00000488994	FER1L4	A9Z1Z3	1794 aa		27.42	■■□□□ 1.98
PNCK-231	ENST00000488994	CROCC2	H7BZ55	1655 aa		27.42	■■□□□ 1.98
PNCK-231	ENST00000488994	NAIP	Q13075	1403 aa		27.42	■■□□□ 1.98
PNCK-231	ENST00000488994	LMTK3	Q96Q04	1460 aa		27.41	■■□□□ 1.98
PNCK-231	ENST00000488994	RTEL1-TNFRSF6B	F6WH68	1400 aa		27.4	■■□□□ 1.98
PNCK-231	ENST00000488994	NCOA1	Q15788	1441 aa		27.4	■■□□□ 1.98
PNCK-231	ENST00000488994	INO80	Q9ULG1	1556 aa	Predicted RBP	27.39	■■□□□ 1.98
PNCK-231	ENST00000488994	RRP7BP	Q9NSQ0	103 aa		27.39	■■□□□ 1.97
PNCK-231	ENST00000488994	MLEC	Q14165	292 aa		27.38	■■□□□ 1.97
PNCK-231	ENST00000488994	CCER1	Q8TC90	406 aa	Predicted RBP	27.37	■■□□□ 1.97
PNCK-231	ENST00000488994	ATP7A	Q04656	1500 aa		27.36	■■□□□ 1.97
PNCK-231	ENST00000488994	ADGB	Q8N7X0	1667 aa		27.36	■■□□□ 1.97
PNCK-231	ENST00000488994	MAST1	Q9Y2H9	1570 aa		27.36	■■□□□ 1.97
PNCK-231	ENST00000488994	MYT1L	Q9UL68	1186 aa		27.35	■■□□□ 1.97

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms