RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TTC37Q6PGP7 1564 aa19.77■□□□□ 0.76
CHD1L-208ENST00000488864 PTPN23Q9H3S7 1636 aa19.73■□□□□ 0.75
CHD1L-208ENST00000488864 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
CHD1L-208ENST00000488864 MIA2Q96PC5 1412 aa19.72■□□□□ 0.75
CHD1L-208ENST00000488864 CENPBP07199 599 aaPredicted RBP19.72■□□□□ 0.75
CHD1L-208ENST00000488864 MAPKBP1O60336 1514 aa19.71■□□□□ 0.75
CHD1L-208ENST00000488864 ITSN2Q9NZM3 1697 aa19.69■□□□□ 0.74
CHD1L-208ENST00000488864 ARHGAP5Q13017 1502 aa19.67■□□□□ 0.74
CHD1L-208ENST00000488864 CDC42BPBQ9Y5S2 1711 aa19.66■□□□□ 0.74
CHD1L-208ENST00000488864 CAMSAP2Q08AD1 1489 aa19.66■□□□□ 0.74
CHD1L-208ENST00000488864 TCOF1Q13428 1488 aaKnown RBP19.66■□□□□ 0.74
CHD1L-208ENST00000488864 PLCH2O75038 1416 aa19.65■□□□□ 0.74
CHD1L-208ENST00000488864 FAM69CQ0P6D2 419 aa19.65■□□□□ 0.74
CHD1L-208ENST00000488864 PREX2Q70Z35 1606 aa19.65■□□□□ 0.74
CHD1L-208ENST00000488864 MYO5CQ9NQX4 1742 aa19.65■□□□□ 0.74
CHD1L-208ENST00000488864 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.65■□□□□ 0.74
CHD1L-208ENST00000488864 ABCA9Q8IUA7 1624 aa19.64■□□□□ 0.73
CHD1L-208ENST00000488864 CHIC2Q9UKJ5 165 aa19.64■□□□□ 0.73
CHD1L-208ENST00000488864 HNRNPMP52272 730 aaKnown RBP eCLIP19.63■□□□□ 0.733e-7■■□□□ 12.7
CHD1L-208ENST00000488864 PTPRKQ15262 1439 aa19.63■□□□□ 0.73
CHD1L-208ENST00000488864 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
CHD1L-208ENST00000488864 CD109Q6YHK3 1445 aa19.62■□□□□ 0.73
CHD1L-208ENST00000488864 SAMD9LQ8IVG5 1584 aa19.59■□□□□ 0.73
CHD1L-208ENST00000488864 FANCAO15360 1455 aa19.57■□□□□ 0.72
CHD1L-208ENST00000488864 DIP2BQ9P265 1576 aa19.57■□□□□ 0.72
CHD1L-208ENST00000488864 ABCC5O15440 1437 aa19.57■□□□□ 0.72
CHD1L-208ENST00000488864 DAPK1P53355 1430 aa19.57■□□□□ 0.72
CHD1L-208ENST00000488864 SYCP2Q9BX26 1530 aa19.55■□□□□ 0.72
CHD1L-208ENST00000488864 RRP7BPQ9NSQ0 103 aa19.54■□□□□ 0.72
CHD1L-208ENST00000488864 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
CHD1L-208ENST00000488864 MBD5Q9P267 1494 aa19.53■□□□□ 0.72
CHD1L-208ENST00000488864 ARHGEF12Q9NZN5 1544 aa19.53■□□□□ 0.72
CHD1L-208ENST00000488864 DNMT1P26358 1616 aaKnown RBP19.53■□□□□ 0.72
CHD1L-208ENST00000488864 ARAP3Q8WWN8 1544 aa19.52■□□□□ 0.71
CHD1L-208ENST00000488864 GLI2P10070 1586 aa19.51■□□□□ 0.71
CHD1L-208ENST00000488864 MAP3K4Q9Y6R4 1608 aa19.5■□□□□ 0.71
CHD1L-208ENST00000488864 TSPY4P0CV99 314 aa19.5■□□□□ 0.71
CHD1L-208ENST00000488864 TSPY10P0CW01 314 aa19.5■□□□□ 0.71
CHD1L-208ENST00000488864 AFAP1Q8N556 730 aa19.5■□□□□ 0.71
CHD1L-208ENST00000488864 TSPOAP1O95153 1857 aa19.49■□□□□ 0.71
CHD1L-208ENST00000488864 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
CHD1L-208ENST00000488864 AKNAQ7Z591 1439 aa19.49■□□□□ 0.71
CHD1L-208ENST00000488864 ADGRL1O94910 1474 aa19.48■□□□□ 0.71
CHD1L-208ENST00000488864 ABCC1P33527 1531 aa19.48■□□□□ 0.71
CHD1L-208ENST00000488864 KIAA1107Q9UPP5 1409 aa19.48■□□□□ 0.71
CHD1L-208ENST00000488864 TRAPPC8Q9Y2L5 1435 aa19.48■□□□□ 0.71
CHD1L-208ENST00000488864 SCAPERQ9BY12 1400 aa19.48■□□□□ 0.71
CHD1L-208ENST00000488864 PLEKHH2Q8IVE3 1493 aa19.47■□□□□ 0.71
CHD1L-208ENST00000488864 CCDC141Q6ZP82 1450 aa19.47■□□□□ 0.71
CHD1L-208ENST00000488864 KIF13AQ9H1H9 1805 aa19.47■□□□□ 0.71
CHD1L-208ENST00000488864 YTHDC1Q96MU7 727 aaKnown RBP19.46■□□□□ 0.71
CHD1L-208ENST00000488864 C9orf84Q5VXU9 1444 aa19.45■□□□□ 0.7
CHD1L-208ENST00000488864 RAB3GAP2Q9H2M9 1393 aa19.45■□□□□ 0.7
CHD1L-208ENST00000488864 RSPH4AQ5TD94 716 aa19.44■□□□□ 0.7
CHD1L-208ENST00000488864 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
CHD1L-208ENST00000488864 ARHGEF5Q12774 1597 aa19.44■□□□□ 0.7
CHD1L-208ENST00000488864 NAIPQ13075 1403 aa19.43■□□□□ 0.7
CHD1L-208ENST00000488864 MYT1Q01538 1121 aa19.43■□□□□ 0.7
CHD1L-208ENST00000488864 HFM1A2PYH4 1435 aa19.42■□□□□ 0.7
CHD1L-208ENST00000488864 CROCC2H7BZ55 1655 aa19.42■□□□□ 0.7
CHD1L-208ENST00000488864 RAPGEF3O95398 923 aa19.42■□□□□ 0.7
CHD1L-208ENST00000488864 MYT1LQ9UL68 1186 aa19.42■□□□□ 0.7
CHD1L-208ENST00000488864 NCOA1Q15788 1441 aa19.41■□□□□ 0.7
CHD1L-208ENST00000488864 NEO1Q92859 1461 aa19.4■□□□□ 0.7
CHD1L-208ENST00000488864 ROCK1Q13464 1354 aa19.39■□□□□ 0.7
CHD1L-208ENST00000488864 ANKRD30AQ9BXX3 1397 aa19.39■□□□□ 0.7
CHD1L-208ENST00000488864 PPRC1Q5VV67 1664 aaKnown RBP19.39■□□□□ 0.69
CHD1L-208ENST00000488864 SHANK2Q9UPX8 1470 aa19.39■□□□□ 0.69
CHD1L-208ENST00000488864 SPAG9O60271 1321 aaKnown RBP19.39■□□□□ 0.69
CHD1L-208ENST00000488864 CFAP74Q9C0B2 1584 aa19.39■□□□□ 0.69
CHD1L-208ENST00000488864 MIER1Q8N108 512 aa19.38■□□□□ 0.69
CHD1L-208ENST00000488864 ADGRL2O95490 1459 aa19.36■□□□□ 0.69
CHD1L-208ENST00000488864 KIF15Q9NS87 1388 aa19.36■□□□□ 0.69
CHD1L-208ENST00000488864 TEX14Q8IWB6 1497 aa19.35■□□□□ 0.69
CHD1L-208ENST00000488864 KDM6BO15054 1643 aa19.35■□□□□ 0.69
CHD1L-208ENST00000488864 POGZQ7Z3K3 1410 aa19.34■□□□□ 0.69
CHD1L-208ENST00000488864 ADGBQ8N7X0 1667 aa19.34■□□□□ 0.69
CHD1L-208ENST00000488864 DENND4BO75064 1496 aaPredicted RBP19.34■□□□□ 0.69
CHD1L-208ENST00000488864 ZNF518AQ6AHZ1 1483 aa19.34■□□□□ 0.69
CHD1L-208ENST00000488864 GCC2Q8IWJ2 1684 aa19.31■□□□□ 0.68
CHD1L-208ENST00000488864 MAST1Q9Y2H9 1570 aa19.3■□□□□ 0.68
CHD1L-208ENST00000488864 ANKRD50Q9ULJ7 1429 aa19.3■□□□□ 0.68
CHD1L-208ENST00000488864 TRIM52Q96A61 297 aa19.3■□□□□ 0.68
CHD1L-208ENST00000488864 ZFYVE16Q7Z3T8 1539 aa19.29■□□□□ 0.68
CHD1L-208ENST00000488864 ATP7AQ04656 1500 aa19.28■□□□□ 0.68
CHD1L-208ENST00000488864 COL17A1Q9UMD9 1497 aaPredicted RBP19.28■□□□□ 0.68
CHD1L-208ENST00000488864 RTEL1-TNFRSF6BF6WH68 1400 aa19.27■□□□□ 0.68
CHD1L-208ENST00000488864 DHX57Q6P158 1386 aaKnown RBP19.26■□□□□ 0.67
CHD1L-208ENST00000488864 KDM5CP41229 1560 aa19.26■□□□□ 0.67
CHD1L-208ENST00000488864 INO80Q9ULG1 1556 aaPredicted RBP19.25■□□□□ 0.67
CHD1L-208ENST00000488864 RICTORQ6R327 1708 aa19.25■□□□□ 0.67
CHD1L-208ENST00000488864 PLXNC1O60486 1568 aa19.24■□□□□ 0.67
CHD1L-208ENST00000488864 KIDINS220Q9ULH0 1771 aa19.24■□□□□ 0.67
CHD1L-208ENST00000488864 FRMPD1Q5SYB0 1578 aa19.23■□□□□ 0.67
CHD1L-208ENST00000488864 MLH3Q9UHC1 1453 aa19.22■□□□□ 0.67
CHD1L-208ENST00000488864 HECW2Q9P2P5 1572 aa19.22■□□□□ 0.67
CHD1L-208ENST00000488864 YEATS2Q9ULM3 1422 aa19.21■□□□□ 0.67
CHD1L-208ENST00000488864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.671e-8■■□□□ 13.5
CHD1L-208ENST00000488864 DUOX2Q9NRD8 1548 aa19.21■□□□□ 0.67
CHD1L-208ENST00000488864 KIF3BO15066 747 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms