RNA–Protein interactions for RNA: ENST00000488144.5

LCLAT1-210, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-210ENST00000488144 FOXD1Q16676 465 aa12.22□□□□□ -0.45
LCLAT1-210ENST00000488144 RGS17Q9UGC6 210 aaPredicted RBP12.22□□□□□ -0.45
LCLAT1-210ENST00000488144 FHOD3Q2V2M9 1422 aa12.21□□□□□ -0.45
LCLAT1-210ENST00000488144 SETD1AO15047 1707 aaKnown RBP12.2□□□□□ -0.46
LCLAT1-210ENST00000488144 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
LCLAT1-210ENST00000488144 C3P01024 1663 aa12.17□□□□□ -0.46
LCLAT1-210ENST00000488144 CAMSAP1Q5T5Y3 1602 aa12.17□□□□□ -0.46
LCLAT1-210ENST00000488144 KIF27Q86VH2 1401 aa12.17□□□□□ -0.46
LCLAT1-210ENST00000488144 MAGI2Q86UL8 1455 aa12.16□□□□□ -0.46
LCLAT1-210ENST00000488144 TOM1O60784 492 aa12.15□□□□□ -0.46
LCLAT1-210ENST00000488144 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
LCLAT1-210ENST00000488144 CFAP74Q9C0B2 1584 aa12.13□□□□□ -0.47
LCLAT1-210ENST00000488144 ATP10BO94823 1461 aa12.11□□□□□ -0.47
LCLAT1-210ENST00000488144 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
LCLAT1-210ENST00000488144 ARID3CA6NKF2 412 aa12.1□□□□□ -0.47
LCLAT1-210ENST00000488144 ALKQ9UM73 1620 aa12.1□□□□□ -0.47
LCLAT1-210ENST00000488144 TRAPPC8Q9Y2L5 1435 aa12.1□□□□□ -0.47
LCLAT1-210ENST00000488144 NCKAP5LQ9HCH0 1330 aa12.1□□□□□ -0.47
LCLAT1-210ENST00000488144 ATP10AO60312 1499 aa12.09□□□□□ -0.47
LCLAT1-210ENST00000488144 POTEAQ6S8J7 498 aa12.09□□□□□ -0.47
LCLAT1-210ENST00000488144 CPS1P31327 1500 aa12.06□□□□□ -0.48
LCLAT1-210ENST00000488144 GOLGA3Q08378 1498 aa12.05□□□□□ -0.48
LCLAT1-210ENST00000488144 PTPRKQ15262 1439 aa12.04□□□□□ -0.48
LCLAT1-210ENST00000488144 SUPT6HQ7KZ85 1726 aaKnown RBP12.03□□□□□ -0.48
LCLAT1-210ENST00000488144 PLA2R1Q13018 1463 aa12.03□□□□□ -0.48
LCLAT1-210ENST00000488144 TCOF1Q13428 1488 aaKnown RBP12.03□□□□□ -0.48
LCLAT1-210ENST00000488144 PKD2Q13563 968 aa12.02□□□□□ -0.49
LCLAT1-210ENST00000488144 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.49
LCLAT1-210ENST00000488144 ZNF142P52746 1687 aaPredicted RBP12.01□□□□□ -0.49
LCLAT1-210ENST00000488144 CTTNBP2Q8WZ74 1663 aa12.01□□□□□ -0.49
LCLAT1-210ENST00000488144 PPP6R1Q9UPN7 881 aa12.01□□□□□ -0.49
LCLAT1-210ENST00000488144 RAPGEF2Q9Y4G8 1499 aa12□□□□□ -0.49
LCLAT1-210ENST00000488144 MYO3AQ8NEV4 1616 aa11.97□□□□□ -0.49
LCLAT1-210ENST00000488144 SHANK2Q9UPX8 1470 aa11.97□□□□□ -0.49
LCLAT1-210ENST00000488144 NPATQ14207 1427 aa11.97□□□□□ -0.49
LCLAT1-210ENST00000488144 SCAPERQ9BY12 1400 aa11.95□□□□□ -0.5
LCLAT1-210ENST00000488144 ESF1Q9H501 851 aaKnown RBP11.95□□□□□ -0.5
LCLAT1-210ENST00000488144 REREQ9P2R6 1566 aa11.95□□□□□ -0.5
LCLAT1-210ENST00000488144 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
LCLAT1-210ENST00000488144 AGLP35573 1532 aa11.95□□□□□ -0.5
LCLAT1-210ENST00000488144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.95□□□□□ -0.5
LCLAT1-210ENST00000488144 RNF17Q9BXT8 1623 aaKnown RBP11.93□□□□□ -0.5
LCLAT1-210ENST00000488144 DIP2CQ9Y2E4 1556 aa11.93□□□□□ -0.5
LCLAT1-210ENST00000488144 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
LCLAT1-210ENST00000488144 CNTLNQ9NXG0 1405 aa11.93□□□□□ -0.5
LCLAT1-210ENST00000488144 POLR1AO95602 1720 aaPredicted RBP11.92□□□□□ -0.5
LCLAT1-210ENST00000488144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
LCLAT1-210ENST00000488144 HNRNPUL2Q1KMD3 747 aaKnown RBP11.92□□□□□ -0.5
LCLAT1-210ENST00000488144 RAPGEF6Q8TEU7 1601 aa11.92□□□□□ -0.5
LCLAT1-210ENST00000488144 VWDEQ8N2E2 1590 aa11.91□□□□□ -0.5
LCLAT1-210ENST00000488144 NEURL4Q96JN8 1562 aa11.9□□□□□ -0.5
LCLAT1-210ENST00000488144 FAM9AQ8IZU1 332 aaPredicted RBP11.89□□□□□ -0.51
LCLAT1-210ENST00000488144 ABCA6Q8N139 1617 aa11.89□□□□□ -0.51
LCLAT1-210ENST00000488144 KDM5CP41229 1560 aa11.88□□□□□ -0.51
LCLAT1-210ENST00000488144 ZNF518AQ6AHZ1 1483 aa11.87□□□□□ -0.51
LCLAT1-210ENST00000488144 NUP153P49790 1475 aaKnown RBP11.86□□□□□ -0.51
LCLAT1-210ENST00000488144 LRRC7Q96NW7 1537 aa11.86□□□□□ -0.51
LCLAT1-210ENST00000488144 SYNMO15061 1565 aa11.84□□□□□ -0.51
LCLAT1-210ENST00000488144 DNMT1P26358 1616 aaKnown RBP11.83□□□□□ -0.52
LCLAT1-210ENST00000488144 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
LCLAT1-210ENST00000488144 STRCP1A6NGW2 1772 aa11.83□□□□□ -0.52
LCLAT1-210ENST00000488144 TRIM52Q96A61 297 aa11.83□□□□□ -0.52
LCLAT1-210ENST00000488144 PLCH2O75038 1416 aa11.83□□□□□ -0.52
LCLAT1-210ENST00000488144 PLEKHD1A6NEE1 506 aa11.82□□□□□ -0.52
LCLAT1-210ENST00000488144 P3H3Q8IVL6 736 aa11.81□□□□□ -0.52
LCLAT1-210ENST00000488144 CLTCQ00610 1675 aaKnown RBP11.81□□□□□ -0.52
LCLAT1-210ENST00000488144 IFFO2Q5TF58 517 aa11.8□□□□□ -0.52
LCLAT1-210ENST00000488144 MYT1LQ9UL68 1186 aa11.8□□□□□ -0.52
LCLAT1-210ENST00000488144 A2ML1A8K2U0 1454 aa11.8□□□□□ -0.52
LCLAT1-210ENST00000488144 MYO5CQ9NQX4 1742 aa11.8□□□□□ -0.52
LCLAT1-210ENST00000488144 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
LCLAT1-210ENST00000488144 AFAP1Q8N556 730 aa11.79□□□□□ -0.52
LCLAT1-210ENST00000488144 MLH3Q9UHC1 1453 aa11.77□□□□□ -0.52
LCLAT1-210ENST00000488144 SAMD9Q5K651 1589 aa11.75□□□□□ -0.53
LCLAT1-210ENST00000488144 FAM135BQ49AJ0 1406 aa11.75□□□□□ -0.53
LCLAT1-210ENST00000488144 IQGAP1P46940 1657 aa11.75□□□□□ -0.53
LCLAT1-210ENST00000488144 EFCAB2Q5VUJ9 269 aa11.74□□□□□ -0.53
LCLAT1-210ENST00000488144 CDK12Q9NYV4 1490 aaPredicted RBP11.74□□□□□ -0.53
LCLAT1-210ENST00000488144 CDK13Q14004 1512 aaKnown RBP11.74□□□□□ -0.53
LCLAT1-210ENST00000488144 DEPDC5O75140 1603 aa11.73□□□□□ -0.53
LCLAT1-210ENST00000488144 NPHP4O75161 1426 aaPredicted RBP11.73□□□□□ -0.53
LCLAT1-210ENST00000488144 XIRP1Q702N8 1843 aaKnown RBP11.73□□□□□ -0.53
LCLAT1-210ENST00000488144 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
LCLAT1-210ENST00000488144 KIDINS220Q9ULH0 1771 aa11.72□□□□□ -0.53
LCLAT1-210ENST00000488144 ROBO1Q9Y6N7 1651 aa11.72□□□□□ -0.53
LCLAT1-210ENST00000488144 MED14O60244 1454 aa11.72□□□□□ -0.53
LCLAT1-210ENST00000488144 RBM33Q96EV2 1170 aaKnown RBP11.72□□□□□ -0.53
LCLAT1-210ENST00000488144 ITSN2Q9NZM3 1697 aa11.71□□□□□ -0.53
LCLAT1-210ENST00000488144 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
LCLAT1-210ENST00000488144 RXRBP28702 533 aa11.69□□□□□ -0.54
LCLAT1-210ENST00000488144 ANKLE2Q86XL3 938 aa11.69□□□□□ -0.54
LCLAT1-210ENST00000488144 ABCC1P33527 1531 aa11.69□□□□□ -0.54
LCLAT1-210ENST00000488144 ARHGAP5Q13017 1502 aa11.69□□□□□ -0.54
LCLAT1-210ENST00000488144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.68□□□□□ -0.54
LCLAT1-210ENST00000488144 LRP6O75581 1613 aa11.68□□□□□ -0.54
LCLAT1-210ENST00000488144 PHLPP1O60346 1717 aa11.67□□□□□ -0.54
LCLAT1-210ENST00000488144 JCADQ9P266 1359 aa11.67□□□□□ -0.54
LCLAT1-210ENST00000488144 LRP5O75197 1615 aa11.65□□□□□ -0.54
LCLAT1-210ENST00000488144 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.54
LCLAT1-210ENST00000488144 RGS12O14924 1447 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms