RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 MYO5CQ9NQX4 1742 aa12.17□□□□□ -0.46
RBM28-206ENST00000487602 FAM50AQ14320 339 aaKnown RBP12.17□□□□□ -0.46
RBM28-206ENST00000487602 CFDP1Q9UEE9 299 aaPredicted RBP12.17□□□□□ -0.46
RBM28-206ENST00000487602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.17□□□□□ -0.46
RBM28-206ENST00000487602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.16□□□□□ -0.46
RBM28-206ENST00000487602 PREX2Q70Z35 1606 aa12.15□□□□□ -0.46
RBM28-206ENST00000487602 GLI2P10070 1586 aa12.15□□□□□ -0.46
RBM28-206ENST00000487602 MAP3K4Q9Y6R4 1608 aa12.15□□□□□ -0.47
RBM28-206ENST00000487602 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
RBM28-206ENST00000487602 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
RBM28-206ENST00000487602 PLCH2O75038 1416 aa12.13□□□□□ -0.47
RBM28-206ENST00000487602 ZNF644Q9H582 1327 aaPredicted RBP12.12□□□□□ -0.47
RBM28-206ENST00000487602 ZNF777Q9ULD5 760 aaPredicted RBP12.12□□□□□ -0.47
RBM28-206ENST00000487602 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
RBM28-206ENST00000487602 CFAP74Q9C0B2 1584 aa12.11□□□□□ -0.47
RBM28-206ENST00000487602 EFCAB2Q5VUJ9 269 aa12.11□□□□□ -0.47
RBM28-206ENST00000487602 ITGAEP38570 1179 aa12.1□□□□□ -0.47
RBM28-206ENST00000487602 ARAP3Q8WWN8 1544 aa12.1□□□□□ -0.47
RBM28-206ENST00000487602 CDC42BPBQ9Y5S2 1711 aa12.09□□□□□ -0.47
RBM28-206ENST00000487602 FAM69CQ0P6D2 419 aa12.09□□□□□ -0.47
RBM28-206ENST00000487602 CD109Q6YHK3 1445 aa12.09□□□□□ -0.47
RBM28-206ENST00000487602 PPRC1Q5VV67 1664 aaKnown RBP12.09□□□□□ -0.47
RBM28-206ENST00000487602 ARHGAP5Q13017 1502 aa12.08□□□□□ -0.48
RBM28-206ENST00000487602 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
RBM28-206ENST00000487602 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.48
RBM28-206ENST00000487602 RSPH4AQ5TD94 716 aa12.06□□□□□ -0.48
RBM28-206ENST00000487602 PTPRKQ15262 1439 aa12.05□□□□□ -0.48
RBM28-206ENST00000487602 KIAA1107Q9UPP5 1409 aa12.05□□□□□ -0.48
RBM28-206ENST00000487602 TSPOAP1O95153 1857 aa12.05□□□□□ -0.48
RBM28-206ENST00000487602 ABCC5O15440 1437 aa12.04□□□□□ -0.48
RBM28-206ENST00000487602 PLEKHH2Q8IVE3 1493 aa12.04□□□□□ -0.48
RBM28-206ENST00000487602 SAMD9LQ8IVG5 1584 aa12.04□□□□□ -0.48
RBM28-206ENST00000487602 DAPK1P53355 1430 aa12.03□□□□□ -0.48
RBM28-206ENST00000487602 FANCAO15360 1455 aa12.03□□□□□ -0.48
RBM28-206ENST00000487602 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
RBM28-206ENST00000487602 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
RBM28-206ENST00000487602 AKNAQ7Z591 1439 aa12.02□□□□□ -0.49
RBM28-206ENST00000487602 TEX14Q8IWB6 1497 aa12.02□□□□□ -0.49
RBM28-206ENST00000487602 ABCC1P33527 1531 aa12.01□□□□□ -0.49
RBM28-206ENST00000487602 DNMT1P26358 1616 aaKnown RBP12.01□□□□□ -0.49
RBM28-206ENST00000487602 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
RBM28-206ENST00000487602 TSPY4P0CV99 314 aa12.01□□□□□ -0.49
RBM28-206ENST00000487602 TSPY10P0CW01 314 aa12.01□□□□□ -0.49
RBM28-206ENST00000487602 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
RBM28-206ENST00000487602 ARHGEF5Q12774 1597 aa12.01□□□□□ -0.49
RBM28-206ENST00000487602 SCAPERQ9BY12 1400 aa11.99□□□□□ -0.49
RBM28-206ENST00000487602 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
RBM28-206ENST00000487602 NEO1Q92859 1461 aa11.99□□□□□ -0.49
RBM28-206ENST00000487602 SYCP2Q9BX26 1530 aa11.99□□□□□ -0.49
RBM28-206ENST00000487602 ADGRL1O94910 1474 aa11.98□□□□□ -0.49
RBM28-206ENST00000487602 SETD5Q9C0A6 1442 aa11.98□□□□□ -0.49
RBM28-206ENST00000487602 TRAPPC8Q9Y2L5 1435 aa11.98□□□□□ -0.49
RBM28-206ENST00000487602 ROCK1Q13464 1354 aa11.98□□□□□ -0.49
RBM28-206ENST00000487602 RRP7BPQ9NSQ0 103 aa11.98□□□□□ -0.49
RBM28-206ENST00000487602 MSH5O43196 834 aa11.97□□□□□ -0.49
RBM28-206ENST00000487602 AFAP1Q8N556 730 aa11.97□□□□□ -0.49
RBM28-206ENST00000487602 SHANK2Q9UPX8 1470 aa11.96□□□□□ -0.49
RBM28-206ENST00000487602 C9orf84Q5VXU9 1444 aa11.96□□□□□ -0.49
RBM28-206ENST00000487602 TRHP20396 242 aaPredicted RBP11.96□□□□□ -0.49
RBM28-206ENST00000487602 HRCP23327 699 aa11.96□□□□□ -0.49
RBM28-206ENST00000487602 ADGRL2O95490 1459 aa11.95□□□□□ -0.5
RBM28-206ENST00000487602 HFM1A2PYH4 1435 aa11.95□□□□□ -0.5
RBM28-206ENST00000487602 NCOA1Q15788 1441 aa11.95□□□□□ -0.5
RBM28-206ENST00000487602 ANKRD30AQ9BXX3 1397 aa11.95□□□□□ -0.5
RBM28-206ENST00000487602 RICTORQ6R327 1708 aa11.95□□□□□ -0.5
RBM28-206ENST00000487602 NAIPQ13075 1403 aa11.94□□□□□ -0.5
RBM28-206ENST00000487602 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
RBM28-206ENST00000487602 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
RBM28-206ENST00000487602 FRMPD1Q5SYB0 1578 aa11.94□□□□□ -0.5
RBM28-206ENST00000487602 RAB3GAP2Q9H2M9 1393 aa11.93□□□□□ -0.5
RBM28-206ENST00000487602 DENND4BO75064 1496 aaPredicted RBP11.93□□□□□ -0.5
RBM28-206ENST00000487602 RTEL1-TNFRSF6BF6WH68 1400 aa11.93□□□□□ -0.5
RBM28-206ENST00000487602 KDM5CP41229 1560 aa11.92□□□□□ -0.5
RBM28-206ENST00000487602 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
RBM28-206ENST00000487602 KDM6BO15054 1643 aa11.92□□□□□ -0.5
RBM28-206ENST00000487602 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
RBM28-206ENST00000487602 ZNF518AQ6AHZ1 1483 aa11.91□□□□□ -0.5
RBM28-206ENST00000487602 RAPGEF3O95398 923 aa11.91□□□□□ -0.5
RBM28-206ENST00000487602 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
RBM28-206ENST00000487602 HECW2Q9P2P5 1572 aa11.91□□□□□ -0.5
RBM28-206ENST00000487602 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
RBM28-206ENST00000487602 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
RBM28-206ENST00000487602 ZFYVE16Q7Z3T8 1539 aa11.89□□□□□ -0.51
RBM28-206ENST00000487602 KIF15Q9NS87 1388 aa11.89□□□□□ -0.51
RBM28-206ENST00000487602 ACIN1Q9UKV3 1341 aaKnown RBP11.88□□□□□ -0.51
RBM28-206ENST00000487602 PLXNC1O60486 1568 aa11.88□□□□□ -0.51
RBM28-206ENST00000487602 MLH3Q9UHC1 1453 aa11.88□□□□□ -0.51
RBM28-206ENST00000487602 ANKRD50Q9ULJ7 1429 aa11.87□□□□□ -0.51
RBM28-206ENST00000487602 GCC2Q8IWJ2 1684 aa11.87□□□□□ -0.51
RBM28-206ENST00000487602 ATP7AQ04656 1500 aa11.86□□□□□ -0.51
RBM28-206ENST00000487602 ARHGEF40Q8TER5 1519 aa11.86□□□□□ -0.51
RBM28-206ENST00000487602 COL17A1Q9UMD9 1497 aaPredicted RBP11.85□□□□□ -0.51
RBM28-206ENST00000487602 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
RBM28-206ENST00000487602 KIDINS220Q9ULH0 1771 aa11.84□□□□□ -0.51
RBM28-206ENST00000487602 DHX29Q7Z478 1369 aaKnown RBP11.84□□□□□ -0.51
RBM28-206ENST00000487602 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
RBM28-206ENST00000487602 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
RBM28-206ENST00000487602 DUOX2Q9NRD8 1548 aa11.84□□□□□ -0.51
RBM28-206ENST00000487602 DHX57Q6P158 1386 aaKnown RBP11.83□□□□□ -0.52
RBM28-206ENST00000487602 DIP2CQ9Y2E4 1556 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms