RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 ARHGAP5Q13017 1502 aa21.82■■□□□ 1.08
GCA-210ENST00000487445 ITSN2Q9NZM3 1697 aa21.81■■□□□ 1.08
GCA-210ENST00000487445 CAMSAP2Q08AD1 1489 aa21.81■■□□□ 1.08
GCA-210ENST00000487445 FAM69CQ0P6D2 419 aa21.8■■□□□ 1.08
GCA-210ENST00000487445 HNRNPMP52272 730 aaKnown RBP eCLIP21.79■■□□□ 1.089e-6■■■■□ 22.2
GCA-210ENST00000487445 CHIC2Q9UKJ5 165 aa21.79■■□□□ 1.08
GCA-210ENST00000487445 CDC42BPAQ5VT25 1732 aa21.79■■□□□ 1.08
GCA-210ENST00000487445 CD109Q6YHK3 1445 aa21.77■■□□□ 1.08
GCA-210ENST00000487445 PREX2Q70Z35 1606 aa21.76■■□□□ 1.07
GCA-210ENST00000487445 PTPRKQ15262 1439 aa21.76■■□□□ 1.07
GCA-210ENST00000487445 ABCA9Q8IUA7 1624 aa21.76■■□□□ 1.07
GCA-210ENST00000487445 MYO5CQ9NQX4 1742 aa21.73■■□□□ 1.07
GCA-210ENST00000487445 ABCC5O15440 1437 aa21.73■■□□□ 1.07
GCA-210ENST00000487445 DAPK1P53355 1430 aa21.72■■□□□ 1.07
GCA-210ENST00000487445 CDC42BPBQ9Y5S2 1711 aa21.72■■□□□ 1.07
GCA-210ENST00000487445 FANCAO15360 1455 aa21.71■■□□□ 1.07
GCA-210ENST00000487445 SAMD9LQ8IVG5 1584 aa21.7■■□□□ 1.06
GCA-210ENST00000487445 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
GCA-210ENST00000487445 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
GCA-210ENST00000487445 RRP7BPQ9NSQ0 103 aa21.69■■□□□ 1.06
GCA-210ENST00000487445 RSPH4AQ5TD94 716 aa21.68■■□□□ 1.06
GCA-210ENST00000487445 ARAP3Q8WWN8 1544 aa21.68■■□□□ 1.06
GCA-210ENST00000487445 PLEKHH2Q8IVE3 1493 aa21.67■■□□□ 1.06
GCA-210ENST00000487445 MBD5Q9P267 1494 aa21.67■■□□□ 1.06
GCA-210ENST00000487445 KIAA1107Q9UPP5 1409 aa21.66■■□□□ 1.06
GCA-210ENST00000487445 SYCP2Q9BX26 1530 aa21.65■■□□□ 1.06
GCA-210ENST00000487445 GLI2P10070 1586 aa21.64■■□□□ 1.06
GCA-210ENST00000487445 DIP2BQ9P265 1576 aa21.64■■□□□ 1.06
GCA-210ENST00000487445 DNMT1P26358 1616 aaKnown RBP21.64■■□□□ 1.05
GCA-210ENST00000487445 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
GCA-210ENST00000487445 ARHGEF12Q9NZN5 1544 aa21.63■■□□□ 1.05
GCA-210ENST00000487445 SETD5Q9C0A6 1442 aa21.63■■□□□ 1.05
GCA-210ENST00000487445 AFAP1Q8N556 730 aa21.62■■□□□ 1.05
GCA-210ENST00000487445 SCAPERQ9BY12 1400 aa21.62■■□□□ 1.05
GCA-210ENST00000487445 CCDC141Q6ZP82 1450 aa21.62■■□□□ 1.05
GCA-210ENST00000487445 ADGRL1O94910 1474 aa21.61■■□□□ 1.05
GCA-210ENST00000487445 RAB3GAP2Q9H2M9 1393 aa21.6■■□□□ 1.05
GCA-210ENST00000487445 C9orf84Q5VXU9 1444 aa21.6■■□□□ 1.05
GCA-210ENST00000487445 TRAPPC8Q9Y2L5 1435 aa21.6■■□□□ 1.05
GCA-210ENST00000487445 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
GCA-210ENST00000487445 ABCC1P33527 1531 aa21.59■■□□□ 1.05
GCA-210ENST00000487445 HFM1A2PYH4 1435 aa21.59■■□□□ 1.05
GCA-210ENST00000487445 ARHGEF5Q12774 1597 aa21.58■■□□□ 1.05
GCA-210ENST00000487445 ROCK1Q13464 1354 aa21.58■■□□□ 1.04
GCA-210ENST00000487445 ANKRD30AQ9BXX3 1397 aa21.58■■□□□ 1.04
GCA-210ENST00000487445 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
GCA-210ENST00000487445 NAIPQ13075 1403 aa21.57■■□□□ 1.04
GCA-210ENST00000487445 MAP3K4Q9Y6R4 1608 aa21.57■■□□□ 1.04
GCA-210ENST00000487445 CCER1Q8TC90 406 aaPredicted RBP21.57■■□□□ 1.04
GCA-210ENST00000487445 NCOA1Q15788 1441 aa21.56■■□□□ 1.04
GCA-210ENST00000487445 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
GCA-210ENST00000487445 NEO1Q92859 1461 aa21.54■■□□□ 1.04
GCA-210ENST00000487445 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
GCA-210ENST00000487445 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
GCA-210ENST00000487445 ADGRL2O95490 1459 aa21.5■■□□□ 1.03
GCA-210ENST00000487445 CFAP74Q9C0B2 1584 aa21.5■■□□□ 1.03
GCA-210ENST00000487445 KIF15Q9NS87 1388 aa21.49■■□□□ 1.03
GCA-210ENST00000487445 TEX14Q8IWB6 1497 aa21.49■■□□□ 1.03
GCA-210ENST00000487445 HRCP23327 699 aa21.49■■□□□ 1.03
GCA-210ENST00000487445 CROCC2H7BZ55 1655 aa21.48■■□□□ 1.03
GCA-210ENST00000487445 DENND4BO75064 1496 aaPredicted RBP21.47■■□□□ 1.03
GCA-210ENST00000487445 TRIM52Q96A61 297 aa21.47■■□□□ 1.03
GCA-210ENST00000487445 ZNF518AQ6AHZ1 1483 aa21.46■■□□□ 1.03
GCA-210ENST00000487445 POGZQ7Z3K3 1410 aa21.46■■□□□ 1.03
GCA-210ENST00000487445 TSPOAP1O95153 1857 aa21.45■■□□□ 1.02
GCA-210ENST00000487445 KIF13AQ9H1H9 1805 aa21.45■■□□□ 1.02
GCA-210ENST00000487445 ANKRD50Q9ULJ7 1429 aa21.44■■□□□ 1.02
GCA-210ENST00000487445 RTEL1-TNFRSF6BF6WH68 1400 aa21.43■■□□□ 1.02
GCA-210ENST00000487445 MAST1Q9Y2H9 1570 aa21.42■■□□□ 1.02
GCA-210ENST00000487445 DHX57Q6P158 1386 aaKnown RBP21.41■■□□□ 1.02
GCA-210ENST00000487445 ADGBQ8N7X0 1667 aa21.41■■□□□ 1.02
GCA-210ENST00000487445 PPRC1Q5VV67 1664 aaKnown RBP21.4■■□□□ 1.02
GCA-210ENST00000487445 KDM6BO15054 1643 aa21.39■■□□□ 1.02
GCA-210ENST00000487445 GCC2Q8IWJ2 1684 aa21.39■■□□□ 1.01
GCA-210ENST00000487445 ZFYVE16Q7Z3T8 1539 aa21.38■■□□□ 1.01
GCA-210ENST00000487445 ATP7AQ04656 1500 aa21.37■■□□□ 1.01
GCA-210ENST00000487445 MLH3Q9UHC1 1453 aa21.34■■□□□ 1.01
GCA-210ENST00000487445 PLXNC1O60486 1568 aa21.34■■□□□ 1.01
GCA-210ENST00000487445 KDM5CP41229 1560 aa21.34■■□□□ 1.01
GCA-210ENST00000487445 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1.01
GCA-210ENST00000487445 ACIN1Q9UKV3 1341 aaKnown RBP21.33■■□□□ 1.01
GCA-210ENST00000487445 COL17A1Q9UMD9 1497 aaPredicted RBP21.33■■□□□ 1.01
GCA-210ENST00000487445 INO80Q9ULG1 1556 aaPredicted RBP21.33■■□□□ 1
GCA-210ENST00000487445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.32■■□□□ 19e-8■■□□□ 14
GCA-210ENST00000487445 MPHOSPH9Q99550 1183 aa21.31■■□□□ 1
GCA-210ENST00000487445 NUP155O75694 1391 aa21.3■■□□□ 1
GCA-210ENST00000487445 DHX29Q7Z478 1369 aaKnown RBP21.3■■□□□ 1
GCA-210ENST00000487445 ERBINQ96RT1 1412 aa21.3■■□□□ 1
GCA-210ENST00000487445 SLC4A1APQ9BWU0 796 aaKnown RBP21.29■■□□□ 1
GCA-210ENST00000487445 HECW2Q9P2P5 1572 aa21.29■■□□□ 1
GCA-210ENST00000487445 KIF3BO15066 747 aa21.29■■□□□ 1
GCA-210ENST00000487445 YEATS2Q9ULM3 1422 aa21.28■■□□□ 1
GCA-210ENST00000487445 FRMPD1Q5SYB0 1578 aa21.27■■□□□ 1
GCA-210ENST00000487445 KIDINS220Q9ULH0 1771 aa21.27■■□□□ 1
GCA-210ENST00000487445 RICTORQ6R327 1708 aa21.26■□□□□ 0.99
GCA-210ENST00000487445 A2MP01023 1474 aa21.26■□□□□ 0.99
GCA-210ENST00000487445 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
GCA-210ENST00000487445 FOXD1Q16676 465 aa21.24■□□□□ 0.99
GCA-210ENST00000487445 CLSPNQ9HAW4 1339 aa21.24■□□□□ 0.99
GCA-210ENST00000487445 MAGI2Q86UL8 1455 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms