RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 MED1Q15648 1581 aaPredicted RBP21.48■■□□□ 1.03
ATPAF1-205ENST00000487193 ARHGEF12Q9NZN5 1544 aa21.46■■□□□ 1.03
ATPAF1-205ENST00000487193 SETD1BQ9UPS6 1966 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-205ENST00000487193 ZMYM4Q5VZL5 1548 aa21.44■■□□□ 1.02
ATPAF1-205ENST00000487193 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
ATPAF1-205ENST00000487193 HSPA1LP34931 641 aa21.42■■□□□ 1.02
ATPAF1-205ENST00000487193 SCAF1Q9H7N4 1312 aaKnown RBP21.42■■□□□ 1.02
ATPAF1-205ENST00000487193 HECW1Q76N89 1606 aa21.41■■□□□ 1.02
ATPAF1-205ENST00000487193 MAGI2Q86UL8 1455 aa21.4■■□□□ 1.02
ATPAF1-205ENST00000487193 ZNF335Q9H4Z2 1342 aaPredicted RBP21.39■■□□□ 1.01
ATPAF1-205ENST00000487193 CFAP74Q9C0B2 1584 aa21.37■■□□□ 1.01
ATPAF1-205ENST00000487193 ATP10AO60312 1499 aa21.37■■□□□ 1.01
ATPAF1-205ENST00000487193 PIP4K2BP78356 416 aa21.36■■□□□ 1.01
ATPAF1-205ENST00000487193 NCOA1Q15788 1441 aa21.33■■□□□ 1.01
ATPAF1-205ENST00000487193 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1.01
ATPAF1-205ENST00000487193 PLEKHD1A6NEE1 506 aa21.32■■□□□ 1
ATPAF1-205ENST00000487193 NCKAP5LQ9HCH0 1330 aa21.31■■□□□ 1
ATPAF1-205ENST00000487193 SCAPERQ9BY12 1400 aa21.3■■□□□ 1
ATPAF1-205ENST00000487193 RAPGEF6Q8TEU7 1601 aa21.3■■□□□ 1
ATPAF1-205ENST00000487193 C3P01024 1663 aa21.28■■□□□ 1
ATPAF1-205ENST00000487193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.27■■□□□ 1
ATPAF1-205ENST00000487193 ESF1Q9H501 851 aaKnown RBP21.26■□□□□ 0.99
ATPAF1-205ENST00000487193 CAMSAP1Q5T5Y3 1602 aa21.26■□□□□ 0.99
ATPAF1-205ENST00000487193 TRAPPC8Q9Y2L5 1435 aa21.25■□□□□ 0.99
ATPAF1-205ENST00000487193 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
ATPAF1-205ENST00000487193 NUP153P49790 1475 aaKnown RBP21.21■□□□□ 0.99
ATPAF1-205ENST00000487193 TOM1O60784 492 aa21.2■□□□□ 0.98
ATPAF1-205ENST00000487193 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
ATPAF1-205ENST00000487193 AFAP1Q8N556 730 aa21.13■□□□□ 0.97
ATPAF1-205ENST00000487193 RANGAP1P46060 587 aaPredicted RBP21.12■□□□□ 0.97
ATPAF1-205ENST00000487193 PKD2Q13563 968 aa21.12■□□□□ 0.97
ATPAF1-205ENST00000487193 PLCH2O75038 1416 aa21.12■□□□□ 0.97
ATPAF1-205ENST00000487193 EFCAB2Q5VUJ9 269 aa21.09■□□□□ 0.97
ATPAF1-205ENST00000487193 RGS17Q9UGC6 210 aaPredicted RBP21.09■□□□□ 0.97
ATPAF1-205ENST00000487193 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
ATPAF1-205ENST00000487193 SAMD9Q5K651 1589 aa21.08■□□□□ 0.97
ATPAF1-205ENST00000487193 SUPT6HQ7KZ85 1726 aaKnown RBP21.06■□□□□ 0.96
ATPAF1-205ENST00000487193 DIP2CQ9Y2E4 1556 aa21.06■□□□□ 0.96
ATPAF1-205ENST00000487193 PRXQ9BXM0 1461 aa21.05■□□□□ 0.96
ATPAF1-205ENST00000487193 ZNF518AQ6AHZ1 1483 aa21.04■□□□□ 0.96
ATPAF1-205ENST00000487193 CNTLNQ9NXG0 1405 aa21.01■□□□□ 0.95
ATPAF1-205ENST00000487193 NPATQ14207 1427 aa21■□□□□ 0.95
ATPAF1-205ENST00000487193 AGLP35573 1532 aa20.99■□□□□ 0.95
ATPAF1-205ENST00000487193 REREQ9P2R6 1566 aa20.99■□□□□ 0.95
ATPAF1-205ENST00000487193 ABCA6Q8N139 1617 aa20.99■□□□□ 0.95
ATPAF1-205ENST00000487193 PLA2R1Q13018 1463 aa20.99■□□□□ 0.95
ATPAF1-205ENST00000487193 TCOF1Q13428 1488 aaKnown RBP20.99■□□□□ 0.95
ATPAF1-205ENST00000487193 ZMYM3Q14202 1370 aa20.98■□□□□ 0.95
ATPAF1-205ENST00000487193 KDM5CP41229 1560 aa20.97■□□□□ 0.95
ATPAF1-205ENST00000487193 MYO5CQ9NQX4 1742 aa20.97■□□□□ 0.95
ATPAF1-205ENST00000487193 POTEAQ6S8J7 498 aa20.95■□□□□ 0.94
ATPAF1-205ENST00000487193 PTPRKQ15262 1439 aa20.95■□□□□ 0.94
ATPAF1-205ENST00000487193 CPS1P31327 1500 aa20.94■□□□□ 0.94
ATPAF1-205ENST00000487193 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
ATPAF1-205ENST00000487193 SHANK2Q9UPX8 1470 aa20.93■□□□□ 0.94
ATPAF1-205ENST00000487193 CEP170BQ9Y4F5 1589 aaPredicted RBP20.92■□□□□ 0.94
ATPAF1-205ENST00000487193 MYO3AQ8NEV4 1616 aa20.92■□□□□ 0.94
ATPAF1-205ENST00000487193 ZNF142P52746 1687 aaPredicted RBP20.92■□□□□ 0.94
ATPAF1-205ENST00000487193 MROH2AA6NES4 1674 aa20.91■□□□□ 0.94
ATPAF1-205ENST00000487193 ALKQ9UM73 1620 aa20.91■□□□□ 0.94
ATPAF1-205ENST00000487193 ARHGAP5Q13017 1502 aa20.9■□□□□ 0.94
ATPAF1-205ENST00000487193 MLH3Q9UHC1 1453 aa20.89■□□□□ 0.94
ATPAF1-205ENST00000487193 ATP1B4Q9UN42 357 aaPredicted RBP20.88■□□□□ 0.93
ATPAF1-205ENST00000487193 CLTCQ00610 1675 aaKnown RBP20.85■□□□□ 0.93
ATPAF1-205ENST00000487193 SETD1AO15047 1707 aaKnown RBP20.83■□□□□ 0.92
ATPAF1-205ENST00000487193 KIF14Q15058 1648 aa20.82■□□□□ 0.92
ATPAF1-205ENST00000487193 KIDINS220Q9ULH0 1771 aa20.8■□□□□ 0.92
ATPAF1-205ENST00000487193 DNMT1P26358 1616 aaKnown RBP20.79■□□□□ 0.92
ATPAF1-205ENST00000487193 POLR1AO95602 1720 aaPredicted RBP20.79■□□□□ 0.92
ATPAF1-205ENST00000487193 NEURL4Q96JN8 1562 aa20.77■□□□□ 0.92
ATPAF1-205ENST00000487193 CDK11AQ9UQ88 783 aaPredicted RBP20.77■□□□□ 0.92
ATPAF1-205ENST00000487193 VWDEQ8N2E2 1590 aa20.76■□□□□ 0.91
ATPAF1-205ENST00000487193 A2ML1A8K2U0 1454 aa20.76■□□□□ 0.91
ATPAF1-205ENST00000487193 GGT6Q6P531 493 aa20.76■□□□□ 0.91
ATPAF1-205ENST00000487193 CDC42BPBQ9Y5S2 1711 aa20.74■□□□□ 0.91
ATPAF1-205ENST00000487193 ANKLE2Q86XL3 938 aa20.73■□□□□ 0.91
ATPAF1-205ENST00000487193 UPF1Q92900 1129 aaKnown RBP eCLIP20.72■□□□□ 0.91
ATPAF1-205ENST00000487193 ITSN2Q9NZM3 1697 aa20.72■□□□□ 0.91
ATPAF1-205ENST00000487193 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
ATPAF1-205ENST00000487193 ABCC1P33527 1531 aa20.69■□□□□ 0.9
ATPAF1-205ENST00000487193 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
ATPAF1-205ENST00000487193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
ATPAF1-205ENST00000487193 RNF17Q9BXT8 1623 aaKnown RBP20.67■□□□□ 0.9
ATPAF1-205ENST00000487193 STRCP1A6NGW2 1772 aa20.67■□□□□ 0.9
ATPAF1-205ENST00000487193 TROQ12816 1431 aaPredicted RBP20.66■□□□□ 0.9
ATPAF1-205ENST00000487193 NPHP4O75161 1426 aaPredicted RBP20.65■□□□□ 0.9
ATPAF1-205ENST00000487193 CLIP1P30622 1438 aa20.64■□□□□ 0.89
ATPAF1-205ENST00000487193 SPAG9O60271 1321 aaKnown RBP20.64■□□□□ 0.89
ATPAF1-205ENST00000487193 FBXO31Q5XUX0 539 aaPredicted RBP20.64■□□□□ 0.89
ATPAF1-205ENST00000487193 ZNF777Q9ULD5 760 aaPredicted RBP20.63■□□□□ 0.89
ATPAF1-205ENST00000487193 SAMD9LQ8IVG5 1584 aa20.63■□□□□ 0.89
ATPAF1-205ENST00000487193 THEMISQ8N1K5 641 aaPredicted RBP20.62■□□□□ 0.89
ATPAF1-205ENST00000487193 PREX2Q70Z35 1606 aa20.6■□□□□ 0.89
ATPAF1-205ENST00000487193 TNRQ92752 1358 aa20.59■□□□□ 0.89
ATPAF1-205ENST00000487193 HNRNPMP52272 730 aaKnown RBP eCLIP20.59■□□□□ 0.89
ATPAF1-205ENST00000487193 TRIM52Q96A61 297 aa20.58■□□□□ 0.89
ATPAF1-205ENST00000487193 A2MP01023 1474 aa20.57■□□□□ 0.88
ATPAF1-205ENST00000487193 MED14O60244 1454 aa20.56■□□□□ 0.88
ATPAF1-205ENST00000487193 IQGAP1P46940 1657 aa20.56■□□□□ 0.88
ATPAF1-205ENST00000487193 SYNMO15061 1565 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms