RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 SUPT5HO00267 1087 aaKnown RBP14.76□□□□□ -0.05
APTX-228ENST00000486724 CEBPAP49715 358 aaPredicted RBP14.76□□□□□ -0.05
APTX-228ENST00000486724 SETD1BQ9UPS6 1966 aaKnown RBP14.74□□□□□ -0.05
APTX-228ENST00000486724 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
APTX-228ENST00000486724 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
APTX-228ENST00000486724 NCOA1Q15788 1441 aa14.72□□□□□ -0.05
APTX-228ENST00000486724 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
APTX-228ENST00000486724 C9orf84Q5VXU9 1444 aa14.7□□□□□ -0.06
APTX-228ENST00000486724 ATP10AO60312 1499 aa14.69□□□□□ -0.06
APTX-228ENST00000486724 HSPA1LP34931 641 aa14.67□□□□□ -0.06
APTX-228ENST00000486724 C3P01024 1663 aa14.66□□□□□ -0.06
APTX-228ENST00000486724 RAPGEF6Q8TEU7 1601 aa14.66□□□□□ -0.06
APTX-228ENST00000486724 ZNF335Q9H4Z2 1342 aaPredicted RBP14.66□□□□□ -0.06
APTX-228ENST00000486724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
APTX-228ENST00000486724 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
APTX-228ENST00000486724 SCAF1Q9H7N4 1312 aaKnown RBP14.63□□□□□ -0.07
APTX-228ENST00000486724 CAMSAP1Q5T5Y3 1602 aa14.63□□□□□ -0.07
APTX-228ENST00000486724 TRAPPC8Q9Y2L5 1435 aa14.62□□□□□ -0.07
APTX-228ENST00000486724 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.61□□□□□ -0.07
APTX-228ENST00000486724 SCAPERQ9BY12 1400 aa14.59□□□□□ -0.07
APTX-228ENST00000486724 NUP153P49790 1475 aaKnown RBP14.58□□□□□ -0.08
APTX-228ENST00000486724 PIP4K2BP78356 416 aa14.58□□□□□ -0.08
APTX-228ENST00000486724 P3H3Q8IVL6 736 aa14.56□□□□□ -0.08
APTX-228ENST00000486724 PLEKHD1A6NEE1 506 aa14.55□□□□□ -0.08
APTX-228ENST00000486724 TOM1O60784 492 aa14.55□□□□□ -0.08
APTX-228ENST00000486724 REREQ9P2R6 1566 aa14.55□□□□□ -0.08
APTX-228ENST00000486724 ESF1Q9H501 851 aaKnown RBP14.54□□□□□ -0.08
APTX-228ENST00000486724 NCKAP5LQ9HCH0 1330 aa14.54□□□□□ -0.08
APTX-228ENST00000486724 SAMD9Q5K651 1589 aa14.54□□□□□ -0.08
APTX-228ENST00000486724 PLA2R1Q13018 1463 aa14.53□□□□□ -0.08
APTX-228ENST00000486724 DIP2CQ9Y2E4 1556 aa14.51□□□□□ -0.09
APTX-228ENST00000486724 AGLP35573 1532 aa14.51□□□□□ -0.09
APTX-228ENST00000486724 ZNF518AQ6AHZ1 1483 aa14.51□□□□□ -0.09
APTX-228ENST00000486724 NPATQ14207 1427 aa14.51□□□□□ -0.09
APTX-228ENST00000486724 CNTLNQ9NXG0 1405 aa14.51□□□□□ -0.09
APTX-228ENST00000486724 PKD2Q13563 968 aa14.51□□□□□ -0.09
APTX-228ENST00000486724 KDM5CP41229 1560 aa14.5□□□□□ -0.09
APTX-228ENST00000486724 TCOF1Q13428 1488 aaKnown RBP14.5□□□□□ -0.09
APTX-228ENST00000486724 PLCH2O75038 1416 aa14.49□□□□□ -0.09
APTX-228ENST00000486724 ZNF142P52746 1687 aaPredicted RBP14.49□□□□□ -0.09
APTX-228ENST00000486724 CPS1P31327 1500 aa14.49□□□□□ -0.09
APTX-228ENST00000486724 SUPT6HQ7KZ85 1726 aaKnown RBP14.49□□□□□ -0.09
APTX-228ENST00000486724 PPP6R1Q9UPN7 881 aa14.48□□□□□ -0.09
APTX-228ENST00000486724 MROH2AA6NES4 1674 aa14.47□□□□□ -0.09
APTX-228ENST00000486724 PRXQ9BXM0 1461 aa14.46□□□□□ -0.09
APTX-228ENST00000486724 ABCA6Q8N139 1617 aa14.46□□□□□ -0.09
APTX-228ENST00000486724 MYO3AQ8NEV4 1616 aa14.46□□□□□ -0.09
APTX-228ENST00000486724 PTPRKQ15262 1439 aa14.46□□□□□ -0.09
APTX-228ENST00000486724 MYO5CQ9NQX4 1742 aa14.45□□□□□ -0.1
APTX-228ENST00000486724 CEP170BQ9Y4F5 1589 aaPredicted RBP14.44□□□□□ -0.1
APTX-228ENST00000486724 RGS17Q9UGC6 210 aaPredicted RBP14.44□□□□□ -0.1
APTX-228ENST00000486724 EFCAB2Q5VUJ9 269 aa14.43□□□□□ -0.1
APTX-228ENST00000486724 MYT1LQ9UL68 1186 aa14.43□□□□□ -0.1
APTX-228ENST00000486724 ALKQ9UM73 1620 aa14.42□□□□□ -0.1
APTX-228ENST00000486724 MLH3Q9UHC1 1453 aa14.4□□□□□ -0.1
APTX-228ENST00000486724 SHANK2Q9UPX8 1470 aa14.4□□□□□ -0.1
APTX-228ENST00000486724 AFAP1Q8N556 730 aa14.4□□□□□ -0.1
APTX-228ENST00000486724 SRCAPQ6ZRS2 3230 aa14.37□□□□□ -0.11
APTX-228ENST00000486724 ZMYM3Q14202 1370 aa14.37□□□□□ -0.11
APTX-228ENST00000486724 POLR1AO95602 1720 aaPredicted RBP14.37□□□□□ -0.11
APTX-228ENST00000486724 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
APTX-228ENST00000486724 SETD1AO15047 1707 aaKnown RBP14.35□□□□□ -0.11
APTX-228ENST00000486724 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
APTX-228ENST00000486724 CDK13Q14004 1512 aaKnown RBP14.35□□□□□ -0.11
APTX-228ENST00000486724 NEURL4Q96JN8 1562 aa14.34□□□□□ -0.11
APTX-228ENST00000486724 POTEAQ6S8J7 498 aa14.33□□□□□ -0.12
APTX-228ENST00000486724 VWDEQ8N2E2 1590 aa14.32□□□□□ -0.12
APTX-228ENST00000486724 RNF17Q9BXT8 1623 aaKnown RBP14.32□□□□□ -0.12
APTX-228ENST00000486724 CLTCQ00610 1675 aaKnown RBP14.32□□□□□ -0.12
APTX-228ENST00000486724 DNMT1P26358 1616 aaKnown RBP14.31□□□□□ -0.12
APTX-228ENST00000486724 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
APTX-228ENST00000486724 KIF14Q15058 1648 aa14.3□□□□□ -0.12
APTX-228ENST00000486724 KIDINS220Q9ULH0 1771 aa14.29□□□□□ -0.12
APTX-228ENST00000486724 SYNMO15061 1565 aa14.27□□□□□ -0.12
APTX-228ENST00000486724 ABCC1P33527 1531 aa14.27□□□□□ -0.12
APTX-228ENST00000486724 ITSN2Q9NZM3 1697 aa14.26□□□□□ -0.13
APTX-228ENST00000486724 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
APTX-228ENST00000486724 RANGAP1P46060 587 aaPredicted RBP14.23□□□□□ -0.13
APTX-228ENST00000486724 LRRC7Q96NW7 1537 aa14.23□□□□□ -0.13
APTX-228ENST00000486724 UPF1Q92900 1129 aaKnown RBP eCLIP14.21□□□□□ -0.13
APTX-228ENST00000486724 CDK11AQ9UQ88 783 aaPredicted RBP14.21□□□□□ -0.13
APTX-228ENST00000486724 PREX2Q70Z35 1606 aa14.21□□□□□ -0.13
APTX-228ENST00000486724 DEPDC5O75140 1603 aa14.2□□□□□ -0.14
APTX-228ENST00000486724 NPHP4O75161 1426 aaPredicted RBP14.2□□□□□ -0.14
APTX-228ENST00000486724 CLIP1P30622 1438 aa14.2□□□□□ -0.14
APTX-228ENST00000486724 PLXNC1O60486 1568 aa14.2□□□□□ -0.14
APTX-228ENST00000486724 STRCP1A6NGW2 1772 aa14.19□□□□□ -0.14
APTX-228ENST00000486724 MED14O60244 1454 aa14.19□□□□□ -0.14
APTX-228ENST00000486724 TROQ12816 1431 aaPredicted RBP14.19□□□□□ -0.14
APTX-228ENST00000486724 ANKLE2Q86XL3 938 aa14.19□□□□□ -0.14
APTX-228ENST00000486724 SAMD9LQ8IVG5 1584 aa14.18□□□□□ -0.14
APTX-228ENST00000486724 IQGAP1P46940 1657 aa14.18□□□□□ -0.14
APTX-228ENST00000486724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
APTX-228ENST00000486724 TNRQ92752 1358 aa14.14□□□□□ -0.15
APTX-228ENST00000486724 A2MP01023 1474 aa14.13□□□□□ -0.15
APTX-228ENST00000486724 GGT6Q6P531 493 aa14.13□□□□□ -0.15
APTX-228ENST00000486724 ATP7AQ04656 1500 aa14.13□□□□□ -0.15
APTX-228ENST00000486724 FAM135BQ49AJ0 1406 aa14.13□□□□□ -0.15
APTX-228ENST00000486724 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
APTX-228ENST00000486724 SPAG9O60271 1321 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms