RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
GABRE-209ENST00000486255 FMN1Q68DA7 1419 aa11.22□□□□□ -0.61
GABRE-209ENST00000486255 BIVM-ERCC5R4GMW8 1640 aa11.22□□□□□ -0.61
GABRE-209ENST00000486255 CHIC2Q9UKJ5 165 aa11.22□□□□□ -0.61
GABRE-209ENST00000486255 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
GABRE-209ENST00000486255 NOC3LQ8WTT2 800 aaKnown RBP11.22□□□□□ -0.61
GABRE-209ENST00000486255 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
GABRE-209ENST00000486255 TDRD9Q8NDG6 1382 aaKnown RBP11.22□□□□□ -0.61
GABRE-209ENST00000486255 FGD1P98174 961 aa11.21□□□□□ -0.61
GABRE-209ENST00000486255 SENP3-EIF4A1A0A087X0R7 540 aa11.21□□□□□ -0.61
GABRE-209ENST00000486255 GOLGA6L1Q8N7Z2 621 aa11.21□□□□□ -0.62
GABRE-209ENST00000486255 IGF1RP08069 1367 aa11.2□□□□□ -0.62
GABRE-209ENST00000486255 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
GABRE-209ENST00000486255 SETQ01105 290 aaPredicted RBP11.2□□□□□ -0.62
GABRE-209ENST00000486255 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
GABRE-209ENST00000486255 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
GABRE-209ENST00000486255 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
GABRE-209ENST00000486255 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
GABRE-209ENST00000486255 GAPVD1Q14C86 1478 aa11.19□□□□□ -0.62
GABRE-209ENST00000486255 CALRP27797 417 aaKnown RBP11.18□□□□□ -0.62
GABRE-209ENST00000486255 KCNJ4P48050 445 aa11.18□□□□□ -0.62
GABRE-209ENST00000486255 CHMP4BQ9H444 224 aaKnown RBP11.18□□□□□ -0.62
GABRE-209ENST00000486255 MCCP23508 829 aa11.17□□□□□ -0.62
GABRE-209ENST00000486255 HSP90AA2PQ14568 343 aaPredicted RBP11.17□□□□□ -0.62
GABRE-209ENST00000486255 CLSTN1O94985 981 aa11.17□□□□□ -0.62
GABRE-209ENST00000486255 PHF23Q9BUL5 403 aaPredicted RBP11.17□□□□□ -0.62
GABRE-209ENST00000486255 FRAT1Q92837 279 aaPredicted RBP11.17□□□□□ -0.62
GABRE-209ENST00000486255 GBP4Q96PP9 640 aa11.16□□□□□ -0.62
GABRE-209ENST00000486255 PRXQ9BXM0 1461 aa11.16□□□□□ -0.62
GABRE-209ENST00000486255 RAD54L2Q9Y4B4 1467 aa11.16□□□□□ -0.62
GABRE-209ENST00000486255 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
GABRE-209ENST00000486255 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
GABRE-209ENST00000486255 NESP48681 1621 aa11.15□□□□□ -0.62
GABRE-209ENST00000486255 MS4A1P11836 297 aa11.15□□□□□ -0.62
GABRE-209ENST00000486255 GOLGA6L3A6NEY3 463 aa11.15□□□□□ -0.62
GABRE-209ENST00000486255 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
GABRE-209ENST00000486255 GZF1Q9H116 711 aaPredicted RBP11.15□□□□□ -0.62
GABRE-209ENST00000486255 CARMIL2Q6F5E8 1435 aa11.15□□□□□ -0.63
GABRE-209ENST00000486255 CCNB3Q8WWL7 1395 aa11.14□□□□□ -0.63
GABRE-209ENST00000486255 A0A0U1RQG5 324 aaPredicted RBP11.14□□□□□ -0.63
GABRE-209ENST00000486255 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
GABRE-209ENST00000486255 ARHGAP35Q9NRY4 1499 aa11.13□□□□□ -0.63
GABRE-209ENST00000486255 POLA1P09884 1462 aaPredicted RBP11.13□□□□□ -0.63
GABRE-209ENST00000486255 MAPK8IP3Q9UPT6 1336 aa11.13□□□□□ -0.63
GABRE-209ENST00000486255 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
GABRE-209ENST00000486255 KNSTRNQ9Y448 316 aa11.13□□□□□ -0.63
GABRE-209ENST00000486255 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
GABRE-209ENST00000486255 MLECQ14165 292 aa11.12□□□□□ -0.63
GABRE-209ENST00000486255 ABCA10Q8WWZ4 1543 aa11.12□□□□□ -0.63
GABRE-209ENST00000486255 CFAP44Q96MT7 982 aa11.12□□□□□ -0.63
GABRE-209ENST00000486255 USP35Q9P2H5 1018 aa11.12□□□□□ -0.63
GABRE-209ENST00000486255 TPM4P67936 248 aa11.11□□□□□ -0.63
GABRE-209ENST00000486255 SYAP1Q96A49 352 aaPredicted RBP11.11□□□□□ -0.63
GABRE-209ENST00000486255 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
GABRE-209ENST00000486255 GNL2Q13823 731 aaKnown RBP11.1□□□□□ -0.63
GABRE-209ENST00000486255 PLEKHD1A6NEE1 506 aa11.1□□□□□ -0.63
GABRE-209ENST00000486255 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
GABRE-209ENST00000486255 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
GABRE-209ENST00000486255 PRDM2Q13029 1718 aa11.09□□□□□ -0.63
GABRE-209ENST00000486255 CUL7Q14999 1698 aa11.09□□□□□ -0.63
GABRE-209ENST00000486255 FHOD3Q2V2M9 1422 aa11.08□□□□□ -0.64
GABRE-209ENST00000486255 CDCA8Q53HL2 280 aa11.08□□□□□ -0.64
GABRE-209ENST00000486255 LMOD2Q6P5Q4 547 aa11.06□□□□□ -0.64
GABRE-209ENST00000486255 ZNF771Q7L3S4 317 aaPredicted RBP11.06□□□□□ -0.64
GABRE-209ENST00000486255 HTATSF1O43719 755 aaKnown RBP11.06□□□□□ -0.64
GABRE-209ENST00000486255 NUDCQ9Y266 331 aa11.06□□□□□ -0.64
GABRE-209ENST00000486255 TSPY4P0CV99 314 aa11.05□□□□□ -0.64
GABRE-209ENST00000486255 TSPY10P0CW01 314 aa11.05□□□□□ -0.64
GABRE-209ENST00000486255 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
GABRE-209ENST00000486255 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
GABRE-209ENST00000486255 KANK4Q5T7N3 995 aaPredicted RBP11.04□□□□□ -0.64
GABRE-209ENST00000486255 RRP7BPQ9NSQ0 103 aa11.03□□□□□ -0.64
GABRE-209ENST00000486255 NPHP1O15259 732 aa11.03□□□□□ -0.64
GABRE-209ENST00000486255 CC2D1BQ5T0F9 858 aaKnown RBP11.02□□□□□ -0.64
GABRE-209ENST00000486255 CCDC18Q5T9S5 1454 aa11.02□□□□□ -0.64
GABRE-209ENST00000486255 IPO9Q96P70 1041 aaKnown RBP11.02□□□□□ -0.65
GABRE-209ENST00000486255 PRM3Q9NNZ6 103 aa11.02□□□□□ -0.65
GABRE-209ENST00000486255 ARAP1Q96P48 1450 aa11.02□□□□□ -0.65
GABRE-209ENST00000486255 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
GABRE-209ENST00000486255 CARD11Q9BXL7 1154 aa11.01□□□□□ -0.65
GABRE-209ENST00000486255 FYCO1Q9BQS8 1478 aa11.01□□□□□ -0.65
GABRE-209ENST00000486255 CASKIN1Q8WXD9 1431 aa11.01□□□□□ -0.65
GABRE-209ENST00000486255 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
GABRE-209ENST00000486255 CFDP1Q9UEE9 299 aaPredicted RBP11.01□□□□□ -0.65
GABRE-209ENST00000486255 SETD5Q9C0A6 1442 aa11.01□□□□□ -0.65
GABRE-209ENST00000486255 AQRO60306 1485 aaKnown RBP eCLIP11.01□□□□□ -0.658e-7■■■□□ 17.6
GABRE-209ENST00000486255 URB2Q14146 1524 aaKnown RBP11□□□□□ -0.65
GABRE-209ENST00000486255 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
GABRE-209ENST00000486255 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
GABRE-209ENST00000486255 TCERG1O14776 1098 aaKnown RBP11□□□□□ -0.65
GABRE-209ENST00000486255 KIAA1211Q6ZU35 1233 aa11□□□□□ -0.65
GABRE-209ENST00000486255 CALD1Q05682 793 aaKnown RBP11□□□□□ -0.65
GABRE-209ENST00000486255 PDE4CQ08493 712 aa11□□□□□ -0.65
GABRE-209ENST00000486255 PHF14O94880 888 aa10.99□□□□□ -0.65
GABRE-209ENST00000486255 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
GABRE-209ENST00000486255 TPM3P06753 285 aa10.98□□□□□ -0.65
GABRE-209ENST00000486255 RGL3Q3MIN7 710 aa10.98□□□□□ -0.65
GABRE-209ENST00000486255 CCDC9Q9Y3X0 531 aaKnown RBP10.98□□□□□ -0.65
GABRE-209ENST00000486255 GPS2Q13227 327 aa10.97□□□□□ -0.65
GABRE-209ENST00000486255 U2SURPO15042 1029 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms