RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 FGD6Q6ZV73 1430 aa24.46■■□□□ 1.51
APOE-205ENST00000485628 RRBP1Q9P2E9 1410 aaKnown RBP24.45■■□□□ 1.51
APOE-205ENST00000485628 TCOF1Q13428 1488 aaKnown RBP24.43■■□□□ 1.5
APOE-205ENST00000485628 CFDP1Q9UEE9 299 aaPredicted RBP24.42■■□□□ 1.5
APOE-205ENST00000485628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.4■■□□□ 1.5
APOE-205ENST00000485628 FANCAO15360 1455 aa24.39■■□□□ 1.5
APOE-205ENST00000485628 SAMD9LQ8IVG5 1584 aa24.39■■□□□ 1.5
APOE-205ENST00000485628 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.49
APOE-205ENST00000485628 ARHGAP5Q13017 1502 aa24.39■■□□□ 1.49
APOE-205ENST00000485628 NEO1Q92859 1461 aa24.38■■□□□ 1.49
APOE-205ENST00000485628 PTPN23Q9H3S7 1636 aa24.38■■□□□ 1.49
APOE-205ENST00000485628 TSPOAP1O95153 1857 aa24.36■■□□□ 1.49
APOE-205ENST00000485628 ZNF644Q9H582 1327 aaPredicted RBP24.35■■□□□ 1.49
APOE-205ENST00000485628 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
APOE-205ENST00000485628 CFAP74Q9C0B2 1584 aa24.35■■□□□ 1.49
APOE-205ENST00000485628 TEX14Q8IWB6 1497 aa24.35■■□□□ 1.49
APOE-205ENST00000485628 AKNAQ7Z591 1439 aa24.35■■□□□ 1.49
APOE-205ENST00000485628 CAMSAP2Q08AD1 1489 aa24.33■■□□□ 1.49
APOE-205ENST00000485628 MBD5Q9P267 1494 aa24.33■■□□□ 1.49
APOE-205ENST00000485628 TRHP20396 242 aaPredicted RBP24.33■■□□□ 1.49
APOE-205ENST00000485628 ABCC1P33527 1531 aa24.33■■□□□ 1.49
APOE-205ENST00000485628 ARHGEF12Q9NZN5 1544 aa24.33■■□□□ 1.49
APOE-205ENST00000485628 PLEKHH2Q8IVE3 1493 aa24.32■■□□□ 1.48
APOE-205ENST00000485628 ARHGEF5Q12774 1597 aa24.27■■□□□ 1.48
APOE-205ENST00000485628 ADGRL1O94910 1474 aa24.26■■□□□ 1.47
APOE-205ENST00000485628 ZNF777Q9ULD5 760 aaPredicted RBP24.25■■□□□ 1.47
APOE-205ENST00000485628 SYCP2Q9BX26 1530 aa24.25■■□□□ 1.47
APOE-205ENST00000485628 SCAPERQ9BY12 1400 aa24.24■■□□□ 1.47
APOE-205ENST00000485628 COL17A1Q9UMD9 1497 aaPredicted RBP24.24■■□□□ 1.47
APOE-205ENST00000485628 RSPH4AQ5TD94 716 aa24.23■■□□□ 1.47
APOE-205ENST00000485628 DNMT1P26358 1616 aaKnown RBP24.23■■□□□ 1.47
APOE-205ENST00000485628 ABCC5O15440 1437 aa24.22■■□□□ 1.47
APOE-205ENST00000485628 TRAPPC8Q9Y2L5 1435 aa24.22■■□□□ 1.47
APOE-205ENST00000485628 HNRNPMP52272 730 aaKnown RBP eCLIP24.22■■□□□ 1.47
APOE-205ENST00000485628 RICTORQ6R327 1708 aa24.19■■□□□ 1.46
APOE-205ENST00000485628 FAM50AQ14320 339 aaKnown RBP24.19■■□□□ 1.46
APOE-205ENST00000485628 DAPK1P53355 1430 aa24.18■■□□□ 1.46
APOE-205ENST00000485628 PTPRKQ15262 1439 aa24.18■■□□□ 1.46
APOE-205ENST00000485628 POGZQ7Z3K3 1410 aa24.18■■□□□ 1.46
APOE-205ENST00000485628 KDM5CP41229 1560 aa24.18■■□□□ 1.46
APOE-205ENST00000485628 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
APOE-205ENST00000485628 DENND4BO75064 1496 aaPredicted RBP24.18■■□□□ 1.46
APOE-205ENST00000485628 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
APOE-205ENST00000485628 TRIM26Q12899 539 aaPredicted RBP24.17■■□□□ 1.46
APOE-205ENST00000485628 CROCC2H7BZ55 1655 aa24.16■■□□□ 1.46
APOE-205ENST00000485628 ZNF518AQ6AHZ1 1483 aa24.15■■□□□ 1.46
APOE-205ENST00000485628 AFAP1Q8N556 730 aa24.15■■□□□ 1.46
APOE-205ENST00000485628 SHANK2Q9UPX8 1470 aa24.14■■□□□ 1.46
APOE-205ENST00000485628 MAST1Q9Y2H9 1570 aa24.14■■□□□ 1.45
APOE-205ENST00000485628 RTEL1-TNFRSF6BF6WH68 1400 aa24.11■■□□□ 1.45
APOE-205ENST00000485628 ZMYM4Q5VZL5 1548 aa24.11■■□□□ 1.45
APOE-205ENST00000485628 RAPGEF3O95398 923 aa24.11■■□□□ 1.45
APOE-205ENST00000485628 MLH3Q9UHC1 1453 aa24.1■■□□□ 1.45
APOE-205ENST00000485628 ADGRL2O95490 1459 aa24.09■■□□□ 1.45
APOE-205ENST00000485628 INO80Q9ULG1 1556 aaPredicted RBP24.08■■□□□ 1.45
APOE-205ENST00000485628 KIDINS220Q9ULH0 1771 aa24.06■■□□□ 1.44
APOE-205ENST00000485628 ROCK1Q13464 1354 aa24.06■■□□□ 1.44
APOE-205ENST00000485628 C9orf84Q5VXU9 1444 aa24.06■■□□□ 1.44
APOE-205ENST00000485628 KDM6BO15054 1643 aa24.06■■□□□ 1.44
APOE-205ENST00000485628 ZFYVE16Q7Z3T8 1539 aa24.05■■□□□ 1.44
APOE-205ENST00000485628 TSPY4P0CV99 314 aa24.05■■□□□ 1.44
APOE-205ENST00000485628 TSPY10P0CW01 314 aa24.05■■□□□ 1.44
APOE-205ENST00000485628 MAGI2Q86UL8 1455 aa24.05■■□□□ 1.44
APOE-205ENST00000485628 NCOA1Q15788 1441 aa24.04■■□□□ 1.44
APOE-205ENST00000485628 SPAG9O60271 1321 aaKnown RBP24.03■■□□□ 1.44
APOE-205ENST00000485628 HECW2Q9P2P5 1572 aa24.03■■□□□ 1.44
APOE-205ENST00000485628 ATP7AQ04656 1500 aa24.02■■□□□ 1.44
APOE-205ENST00000485628 PLXNC1O60486 1568 aa24.02■■□□□ 1.44
APOE-205ENST00000485628 ADGBQ8N7X0 1667 aa24.01■■□□□ 1.43
APOE-205ENST00000485628 ITGAEP38570 1179 aa23.97■■□□□ 1.43
APOE-205ENST00000485628 ANKRD30AQ9BXX3 1397 aa23.97■■□□□ 1.43
APOE-205ENST00000485628 CHIC2Q9UKJ5 165 aa23.97■■□□□ 1.43
APOE-205ENST00000485628 ABCA6Q8N139 1617 aa23.95■■□□□ 1.43
APOE-205ENST00000485628 HFM1A2PYH4 1435 aa23.95■■□□□ 1.42
APOE-205ENST00000485628 YEATS2Q9ULM3 1422 aa23.95■■□□□ 1.42
APOE-205ENST00000485628 DIP2CQ9Y2E4 1556 aa23.95■■□□□ 1.42
APOE-205ENST00000485628 NAIPQ13075 1403 aa23.93■■□□□ 1.42
APOE-205ENST00000485628 REREQ9P2R6 1566 aa23.91■■□□□ 1.42
APOE-205ENST00000485628 ARHGEF40Q8TER5 1519 aa23.91■■□□□ 1.42
APOE-205ENST00000485628 KIF15Q9NS87 1388 aa23.91■■□□□ 1.42
APOE-205ENST00000485628 GCC2Q8IWJ2 1684 aa23.9■■□□□ 1.42
APOE-205ENST00000485628 DUOX2Q9NRD8 1548 aa23.89■■□□□ 1.42
APOE-205ENST00000485628 ATP10AO60312 1499 aa23.89■■□□□ 1.42
APOE-205ENST00000485628 RRP7BPQ9NSQ0 103 aa23.89■■□□□ 1.41
APOE-205ENST00000485628 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
APOE-205ENST00000485628 PCGF6Q9BYE7 350 aa23.86■■□□□ 1.41
APOE-205ENST00000485628 A2MP01023 1474 aa23.86■■□□□ 1.41
APOE-205ENST00000485628 ERBINQ96RT1 1412 aa23.84■■□□□ 1.41
APOE-205ENST00000485628 BCORL1Q5H9F3 1711 aa23.84■■□□□ 1.41
APOE-205ENST00000485628 SETD5Q9C0A6 1442 aa23.84■■□□□ 1.41
APOE-205ENST00000485628 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
APOE-205ENST00000485628 HRCP23327 699 aa23.83■■□□□ 1.41
APOE-205ENST00000485628 SIGLEC1Q9BZZ2 1709 aa23.83■■□□□ 1.41
APOE-205ENST00000485628 AGLP35573 1532 aa23.82■■□□□ 1.4
APOE-205ENST00000485628 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
APOE-205ENST00000485628 MYT1LQ9UL68 1186 aa23.78■■□□□ 1.4
APOE-205ENST00000485628 RAB3GAP2Q9H2M9 1393 aa23.76■■□□□ 1.39
APOE-205ENST00000485628 DEPDC5O75140 1603 aa23.75■■□□□ 1.39
APOE-205ENST00000485628 RNF17Q9BXT8 1623 aaKnown RBP23.73■■□□□ 1.39
APOE-205ENST00000485628 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms