RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 AKNAQ7Z591 1439 aa31.47■■■□□ 2.63
PKD1-218ENST00000485120 MIA2Q96PC5 1412 aa31.47■■■□□ 2.63
PKD1-218ENST00000485120 PPRC1Q5VV67 1664 aaKnown RBP31.47■■■□□ 2.63
PKD1-218ENST00000485120 PPARGC1BQ86YN6 1023 aaKnown RBP31.45■■■□□ 2.63
PKD1-218ENST00000485120 PREX2Q70Z35 1606 aa31.45■■■□□ 2.62
PKD1-218ENST00000485120 CFAP74Q9C0B2 1584 aa31.43■■■□□ 2.62
PKD1-218ENST00000485120 TSPOAP1O95153 1857 aa31.42■■■□□ 2.62
PKD1-218ENST00000485120 ZNF777Q9ULD5 760 aaPredicted RBP31.4■■■□□ 2.62
PKD1-218ENST00000485120 CDC42BPAQ5VT25 1732 aa31.4■■■□□ 2.62
PKD1-218ENST00000485120 PLEKHH2Q8IVE3 1493 aa31.4■■■□□ 2.62
PKD1-218ENST00000485120 ITSN2Q9NZM3 1697 aa31.39■■■□□ 2.62
PKD1-218ENST00000485120 KIAA1107Q9UPP5 1409 aa31.39■■■□□ 2.62
PKD1-218ENST00000485120 CDC42BPBQ9Y5S2 1711 aa31.38■■■□□ 2.61
PKD1-218ENST00000485120 RSPH4AQ5TD94 716 aa31.36■■■□□ 2.61
PKD1-218ENST00000485120 ADGRL1O94910 1474 aa31.35■■■□□ 2.61
PKD1-218ENST00000485120 SCAPERQ9BY12 1400 aa31.35■■■□□ 2.61
PKD1-218ENST00000485120 FGD6Q6ZV73 1430 aa31.33■■■□□ 2.61
PKD1-218ENST00000485120 DENND4BO75064 1496 aaPredicted RBP31.32■■■□□ 2.6
PKD1-218ENST00000485120 ZNF644Q9H582 1327 aaPredicted RBP31.31■■■□□ 2.6
PKD1-218ENST00000485120 COL17A1Q9UMD9 1497 aaPredicted RBP31.29■■■□□ 2.6
PKD1-218ENST00000485120 SAMD9LQ8IVG5 1584 aa31.26■■■□□ 2.6
PKD1-218ENST00000485120 ABCC1P33527 1531 aa31.26■■■□□ 2.59
PKD1-218ENST00000485120 HNRNPMP52272 730 aaKnown RBP eCLIP31.26■■■□□ 2.59
PKD1-218ENST00000485120 RAPGEF3O95398 923 aa31.25■■■□□ 2.59
PKD1-218ENST00000485120 TCOF1Q13428 1488 aaKnown RBP31.25■■■□□ 2.59
PKD1-218ENST00000485120 CAMSAP2Q08AD1 1489 aa31.24■■■□□ 2.59
PKD1-218ENST00000485120 KDM6BO15054 1643 aa31.24■■■□□ 2.59
PKD1-218ENST00000485120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.23■■■□□ 2.59
PKD1-218ENST00000485120 POGZQ7Z3K3 1410 aa31.23■■■□□ 2.59
PKD1-218ENST00000485120 MBD5Q9P267 1494 aa31.22■■■□□ 2.59
PKD1-218ENST00000485120 ARHGEF12Q9NZN5 1544 aa31.22■■■□□ 2.59
PKD1-218ENST00000485120 ZNF518AQ6AHZ1 1483 aa31.21■■■□□ 2.59
PKD1-218ENST00000485120 AFAP1Q8N556 730 aa31.21■■■□□ 2.59
PKD1-218ENST00000485120 RRBP1Q9P2E9 1410 aaKnown RBP31.19■■■□□ 2.58
PKD1-218ENST00000485120 TRAPPC8Q9Y2L5 1435 aa31.18■■■□□ 2.58
PKD1-218ENST00000485120 PTPN23Q9H3S7 1636 aa31.17■■■□□ 2.58
PKD1-218ENST00000485120 FAM50AQ14320 339 aaKnown RBP31.17■■■□□ 2.58
PKD1-218ENST00000485120 SYCP2Q9BX26 1530 aa31.17■■■□□ 2.58
PKD1-218ENST00000485120 TSPY4P0CV99 314 aa31.15■■■□□ 2.58
PKD1-218ENST00000485120 TSPY10P0CW01 314 aa31.15■■■□□ 2.58
PKD1-218ENST00000485120 MAGI2Q86UL8 1455 aa31.14■■■□□ 2.57
PKD1-218ENST00000485120 ARHGEF5Q12774 1597 aa31.13■■■□□ 2.57
PKD1-218ENST00000485120 CCDC141Q6ZP82 1450 aa31.12■■■□□ 2.57
PKD1-218ENST00000485120 SPAG9O60271 1321 aaKnown RBP31.11■■■□□ 2.57
PKD1-218ENST00000485120 MLH3Q9UHC1 1453 aa31.09■■■□□ 2.57
PKD1-218ENST00000485120 KDM5CP41229 1560 aa31.09■■■□□ 2.57
PKD1-218ENST00000485120 ZMYM4Q5VZL5 1548 aa31.08■■■□□ 2.57
PKD1-218ENST00000485120 RTEL1-TNFRSF6BF6WH68 1400 aa31.07■■■□□ 2.57
PKD1-218ENST00000485120 RICTORQ6R327 1708 aa31.07■■■□□ 2.56
PKD1-218ENST00000485120 FRMPD1Q5SYB0 1578 aa31.07■■■□□ 2.56
PKD1-218ENST00000485120 ABCC5O15440 1437 aa31.06■■■□□ 2.56
PKD1-218ENST00000485120 MYT1LQ9UL68 1186 aa31.04■■■□□ 2.56
PKD1-218ENST00000485120 DAPK1P53355 1430 aa31.03■■■□□ 2.56
PKD1-218ENST00000485120 SHANK2Q9UPX8 1470 aa30.99■■■□□ 2.55
PKD1-218ENST00000485120 C9orf84Q5VXU9 1444 aa30.97■■■□□ 2.55
PKD1-218ENST00000485120 DNMT1P26358 1616 aaKnown RBP30.96■■■□□ 2.55
PKD1-218ENST00000485120 HECW2Q9P2P5 1572 aa30.95■■■□□ 2.54
PKD1-218ENST00000485120 ZFYVE16Q7Z3T8 1539 aa30.94■■■□□ 2.54
PKD1-218ENST00000485120 MAST1Q9Y2H9 1570 aa30.93■■■□□ 2.54
PKD1-218ENST00000485120 YEATS2Q9ULM3 1422 aa30.92■■■□□ 2.54
PKD1-218ENST00000485120 ATP10AO60312 1499 aa30.92■■■□□ 2.54
PKD1-218ENST00000485120 ATP7AQ04656 1500 aa30.92■■■□□ 2.54
PKD1-218ENST00000485120 ANKRD30AQ9BXX3 1397 aa30.9■■■□□ 2.54
PKD1-218ENST00000485120 INO80Q9ULG1 1556 aaPredicted RBP30.89■■■□□ 2.54
PKD1-218ENST00000485120 ROCK1Q13464 1354 aa30.88■■■□□ 2.53
PKD1-218ENST00000485120 ITGAEP38570 1179 aa30.87■■■□□ 2.53
PKD1-218ENST00000485120 CHIC2Q9UKJ5 165 aa30.87■■■□□ 2.53
PKD1-218ENST00000485120 ARHGEF40Q8TER5 1519 aa30.87■■■□□ 2.53
PKD1-218ENST00000485120 PTPRKQ15262 1439 aa30.86■■■□□ 2.53
PKD1-218ENST00000485120 KIDINS220Q9ULH0 1771 aa30.86■■■□□ 2.53
PKD1-218ENST00000485120 ADGRL2O95490 1459 aa30.85■■■□□ 2.53
PKD1-218ENST00000485120 NCOA1Q15788 1441 aa30.85■■■□□ 2.53
PKD1-218ENST00000485120 DHX29Q7Z478 1369 aaKnown RBP30.83■■■□□ 2.53
PKD1-218ENST00000485120 RRP7BPQ9NSQ0 103 aa30.81■■■□□ 2.52
PKD1-218ENST00000485120 REREQ9P2R6 1566 aa30.8■■■□□ 2.52
PKD1-218ENST00000485120 DIP2CQ9Y2E4 1556 aa30.8■■■□□ 2.52
PKD1-218ENST00000485120 A2MP01023 1474 aa30.8■■■□□ 2.52
PKD1-218ENST00000485120 CROCC2H7BZ55 1655 aa30.8■■■□□ 2.52
PKD1-218ENST00000485120 KIF15Q9NS87 1388 aa30.79■■■□□ 2.52
PKD1-218ENST00000485120 PLXNC1O60486 1568 aa30.78■■■□□ 2.52
PKD1-218ENST00000485120 ABCA6Q8N139 1617 aa30.76■■■□□ 2.52
PKD1-218ENST00000485120 TRIM26Q12899 539 aaPredicted RBP30.75■■■□□ 2.51
PKD1-218ENST00000485120 AGLP35573 1532 aa30.73■■■□□ 2.51
PKD1-218ENST00000485120 DUOX2Q9NRD8 1548 aa30.73■■■□□ 2.51
PKD1-218ENST00000485120 ARID4BQ4LE39 1312 aaPredicted RBP30.73■■■□□ 2.51
PKD1-218ENST00000485120 ADGBQ8N7X0 1667 aa30.71■■■□□ 2.51
PKD1-218ENST00000485120 ERBINQ96RT1 1412 aa30.69■■■□□ 2.5
PKD1-218ENST00000485120 PPP6R1Q9UPN7 881 aa30.67■■■□□ 2.5
PKD1-218ENST00000485120 ANKRD50Q9ULJ7 1429 aa30.65■■■□□ 2.5
PKD1-218ENST00000485120 KIF3BO15066 747 aa30.65■■■□□ 2.5
PKD1-218ENST00000485120 HFM1A2PYH4 1435 aa30.64■■■□□ 2.5
PKD1-218ENST00000485120 NAIPQ13075 1403 aa30.61■■■□□ 2.49
PKD1-218ENST00000485120 ACIN1Q9UKV3 1341 aaKnown RBP30.6■■■□□ 2.49
PKD1-218ENST00000485120 GGT6Q6P531 493 aa30.56■■■□□ 2.48
PKD1-218ENST00000485120 EIF2AK4Q9P2K8 1649 aaKnown RBP30.55■■■□□ 2.48
PKD1-218ENST00000485120 MLECQ14165 292 aa30.54■■■□□ 2.48
PKD1-218ENST00000485120 BCORL1Q5H9F3 1711 aa30.53■■■□□ 2.48
PKD1-218ENST00000485120 SETD5Q9C0A6 1442 aa30.5■■■□□ 2.47
PKD1-218ENST00000485120 HRCP23327 699 aa30.5■■■□□ 2.47
PKD1-218ENST00000485120 ESF1Q9H501 851 aaKnown RBP30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms