RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 NISCHQ9Y2I1 1504 aa48.38■■■■■ 5.34
PKD1-218ENST00000485120 CCDC180Q9P1Z9 1646 aa42.68■■■■■ 4.42
PKD1-218ENST00000485120 ABCC9O60706 1549 aa41.26■■■■■ 4.2
PKD1-218ENST00000485120 ZCCHC6Q5VYS8 1495 aaKnown RBP40.4■■■■■ 4.06
PKD1-218ENST00000485120 DCAF8L2P0C7V8 631 aa40.24■■■■■ 4.03
PKD1-218ENST00000485120 MYO15BQ96JP2 1530 aa40.15■■■■■ 4.02
PKD1-218ENST00000485120 DCAF1Q9Y4B6 1507 aa40.14■■■■■ 4.02
PKD1-218ENST00000485120 NACADO15069 1562 aa40.12■■■■■ 4.01
PKD1-218ENST00000485120 RB1CC1Q8TDY2 1594 aa39.98■■■■□ 3.99
PKD1-218ENST00000485120 SCRIBQ14160 1630 aa38.91■■■■□ 3.82
PKD1-218ENST00000485120 UNC13AQ9UPW8 1703 aa38.8■■■■□ 3.8
PKD1-218ENST00000485120 PABPN1Q86U42 306 aaKnown RBP eCLIP38.72■■■■□ 3.79
PKD1-218ENST00000485120 BICRAQ9NZM4 1560 aa38.67■■■■□ 3.78
PKD1-218ENST00000485120 SHROOM4Q9ULL8 1493 aa38.52■■■■□ 3.76
PKD1-218ENST00000485120 EIF4G1Q04637 1599 aaKnown RBP37.64■■■■□ 3.62
PKD1-218ENST00000485120 CECR2Q9BXF3 1484 aa37.58■■■■□ 3.61
PKD1-218ENST00000485120 BAZ1AQ9NRL2 1556 aaPredicted RBP37.46■■■■□ 3.59
PKD1-218ENST00000485120 DNAJC5BQ9UF47 199 aa37.45■■■■□ 3.59
PKD1-218ENST00000485120 SMARCA4P51532 1647 aa37.33■■■■□ 3.57
PKD1-218ENST00000485120 CC2D2AQ9P2K1 1620 aa37.32■■■■□ 3.56
PKD1-218ENST00000485120 MROH2BQ7Z745 1585 aa37.24■■■■□ 3.55
PKD1-218ENST00000485120 ATAD2BQ9ULI0 1458 aa37.11■■■■□ 3.53
PKD1-218ENST00000485120 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
PKD1-218ENST00000485120 SMARCA2P51531 1590 aa37.09■■■■□ 3.53
PKD1-218ENST00000485120 NCAPD3P42695 1498 aa37.08■■■■□ 3.53
PKD1-218ENST00000485120 PEG3Q9GZU2 1588 aa37.05■■■■□ 3.52
PKD1-218ENST00000485120 HMGXB3Q12766 1538 aa36.85■■■■□ 3.49
PKD1-218ENST00000485120 BAZ1BQ9UIG0 1483 aaKnown RBP36.81■■■■□ 3.48
PKD1-218ENST00000485120 WIZO95785 1651 aa36.77■■■■□ 3.48
PKD1-218ENST00000485120 SUPT5HO00267 1087 aaKnown RBP36.54■■■■□ 3.44
PKD1-218ENST00000485120 TOP2AP11388 1531 aaKnown RBP36.53■■■■□ 3.44
PKD1-218ENST00000485120 CCDC88BA6NC98 1476 aa36.13■■■■□ 3.37
PKD1-218ENST00000485120 CADPSQ9ULU8 1353 aa36.03■■■■□ 3.36
PKD1-218ENST00000485120 LAMC3Q9Y6N6 1575 aa35.91■■■■□ 3.34
PKD1-218ENST00000485120 CFTRP13569 1480 aa35.89■■■■□ 3.34
PKD1-218ENST00000485120 NESP48681 1621 aa35.83■■■■□ 3.33
PKD1-218ENST00000485120 PDS5BQ9NTI5 1447 aa35.76■■■■□ 3.32
PKD1-218ENST00000485120 ERCC6Q03468 1493 aa35.58■■■■□ 3.29
PKD1-218ENST00000485120 FANCD2Q9BXW9 1451 aa35.53■■■■□ 3.28
PKD1-218ENST00000485120 CEP164Q9UPV0 1460 aa35.42■■■■□ 3.26
PKD1-218ENST00000485120 PRDM2Q13029 1718 aa35.37■■■■□ 3.25
PKD1-218ENST00000485120 KIF21AQ7Z4S6 1674 aa35.3■■■■□ 3.24
PKD1-218ENST00000485120 MRC2Q9UBG0 1479 aa35.27■■■■□ 3.24
PKD1-218ENST00000485120 ABCC8Q09428 1581 aa35.17■■■■□ 3.22
PKD1-218ENST00000485120 THOC2Q8NI27 1593 aaKnown RBP35.13■■■■□ 3.21
PKD1-218ENST00000485120 WDR62O43379 1518 aa35.1■■■■□ 3.21
PKD1-218ENST00000485120 URB2Q14146 1524 aaKnown RBP35.08■■■■□ 3.21
PKD1-218ENST00000485120 CUX2O14529 1486 aa35.07■■■■□ 3.2
PKD1-218ENST00000485120 TOPBP1Q92547 1522 aa35■■■■□ 3.19
PKD1-218ENST00000485120 DNMBPQ6XZF7 1577 aa34.98■■■■□ 3.19
PKD1-218ENST00000485120 WRNQ14191 1432 aaPredicted RBP eCLIP34.97■■■■□ 3.19
PKD1-218ENST00000485120 CUX1P39880 1505 aa34.9■■■■□ 3.18
PKD1-218ENST00000485120 TOP2BQ02880 1626 aa34.75■■■■□ 3.15
PKD1-218ENST00000485120 POLA1P09884 1462 aaPredicted RBP34.74■■■■□ 3.15
PKD1-218ENST00000485120 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
PKD1-218ENST00000485120 IFT140Q96RY7 1462 aa34.71■■■■□ 3.15
PKD1-218ENST00000485120 SYNJ1O43426 1573 aa34.7■■■■□ 3.14
PKD1-218ENST00000485120 SOGA1O94964 1423 aa34.69■■■■□ 3.14
PKD1-218ENST00000485120 BIVM-ERCC5R4GMW8 1640 aa34.69■■■■□ 3.14
PKD1-218ENST00000485120 TRIM41Q8WV44 630 aa34.58■■■■□ 3.13
PKD1-218ENST00000485120 RAD54L2Q9Y4B4 1467 aa34.55■■■■□ 3.12
PKD1-218ENST00000485120 TARBP1Q13395 1621 aaKnown RBP34.51■■■■□ 3.11
PKD1-218ENST00000485120 CHIC1Q5VXU3 224 aa34.48■■■■□ 3.11
PKD1-218ENST00000485120 ABCA10Q8WWZ4 1543 aa34.47■■■■□ 3.11
PKD1-218ENST00000485120 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
PKD1-218ENST00000485120 TDRD9Q8NDG6 1382 aaKnown RBP34.38■■■■□ 3.09
PKD1-218ENST00000485120 WDR97A6NE52 1622 aa34.38■■■■□ 3.09
PKD1-218ENST00000485120 AQRO60306 1485 aaKnown RBP eCLIP34.33■■■■□ 3.092e-6■■■■■ 33.4
PKD1-218ENST00000485120 GAPVD1Q14C86 1478 aa34.26■■■■□ 3.07
PKD1-218ENST00000485120 KIF27Q86VH2 1401 aa34.24■■■■□ 3.07
PKD1-218ENST00000485120 EIF4G3O43432 1585 aaKnown RBP34.22■■■■□ 3.07
PKD1-218ENST00000485120 GRIN2BQ13224 1484 aa34.2■■■■□ 3.06
PKD1-218ENST00000485120 ABCA5Q8WWZ7 1642 aa34.16■■■■□ 3.06
PKD1-218ENST00000485120 ERICH3Q5RHP9 1530 aa34.06■■■■□ 3.04
PKD1-218ENST00000485120 IGF1RP08069 1367 aa34.05■■■■□ 3.04
PKD1-218ENST00000485120 MAGI1Q96QZ7 1491 aaPredicted RBP34.05■■■■□ 3.04
PKD1-218ENST00000485120 EEA1Q15075 1411 aa34■■■■□ 3.03
PKD1-218ENST00000485120 SNAPC4Q5SXM2 1469 aa34■■■■□ 3.03
PKD1-218ENST00000485120 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
PKD1-218ENST00000485120 FHAD1B1AJZ9 1412 aa33.93■■■■□ 3.02
PKD1-218ENST00000485120 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
PKD1-218ENST00000485120 CHMP7Q8WUX9 453 aaPredicted RBP33.92■■■■□ 3.02
PKD1-218ENST00000485120 SYNJ2O15056 1496 aa33.9■■■■□ 3.02
PKD1-218ENST00000485120 CSRNP3Q8WYN3 585 aa33.88■■■■□ 3.01
PKD1-218ENST00000485120 FBLN2P98095 1184 aa33.85■■■■□ 3.01
PKD1-218ENST00000485120 CARMIL1Q5VZK9 1371 aa33.85■■■■□ 3.01
PKD1-218ENST00000485120 OSCARQ8IYS5 282 aa33.81■■■■□ 3
PKD1-218ENST00000485120 ADAMTS12P58397 1594 aa33.8■■■■□ 3
PKD1-218ENST00000485120 CUL7Q14999 1698 aa33.77■■■■□ 3
PKD1-218ENST00000485120 FAM9AQ8IZU1 332 aaPredicted RBP33.72■■■□□ 2.99
PKD1-218ENST00000485120 GRIN2AQ12879 1464 aa33.71■■■□□ 2.99
PKD1-218ENST00000485120 PRXQ9BXM0 1461 aa33.69■■■□□ 2.98
PKD1-218ENST00000485120 RAPGEF2Q9Y4G8 1499 aa33.68■■■□□ 2.98
PKD1-218ENST00000485120 CHD1O14646 1710 aa33.59■■■□□ 2.97
PKD1-218ENST00000485120 NUP160Q12769 1436 aa33.59■■■□□ 2.97
PKD1-218ENST00000485120 CEP170Q5SW79 1584 aa33.43■■■□□ 2.94
PKD1-218ENST00000485120 DNAJC5Q9H3Z4 198 aa33.43■■■□□ 2.94
PKD1-218ENST00000485120 KIAA0586Q9BVV6 1533 aa33.43■■■□□ 2.94
PKD1-218ENST00000485120 KIF21BO75037 1637 aa33.42■■■□□ 2.94
PKD1-218ENST00000485120 CLASP1Q7Z460 1538 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms