RNA–Protein interactions for RNA: ENST00000484081.1

CUL3-210, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-210ENST00000484081 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
CUL3-210ENST00000484081 GPHNQ9NQX3 736 aaPredicted RBP12.97□□□□□ -0.33
CUL3-210ENST00000484081 KIF3CO14782 793 aa12.96□□□□□ -0.33
CUL3-210ENST00000484081 POTEJP0CG39 1038 aa12.96□□□□□ -0.33
CUL3-210ENST00000484081 TMEM92Q6UXU6 159 aa12.96□□□□□ -0.33
CUL3-210ENST00000484081 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.33
CUL3-210ENST00000484081 WDR70Q9NW82 654 aa12.93□□□□□ -0.34
CUL3-210ENST00000484081 DDX27Q96GQ7 796 aaKnown RBP12.92□□□□□ -0.34
CUL3-210ENST00000484081 C2orf72A6NCS6 295 aa12.9□□□□□ -0.34
CUL3-210ENST00000484081 FOXK1P85037 733 aa12.89□□□□□ -0.35
CUL3-210ENST00000484081 TMC2Q8TDI7 906 aa12.89□□□□□ -0.35
CUL3-210ENST00000484081 DSG2Q14126 1118 aa12.88□□□□□ -0.35
CUL3-210ENST00000484081 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
CUL3-210ENST00000484081 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
CUL3-210ENST00000484081 KCNV2Q8TDN2 545 aa12.88□□□□□ -0.35
CUL3-210ENST00000484081 CAMK2BQ13554 666 aa12.86□□□□□ -0.35
CUL3-210ENST00000484081 E2F4Q16254 413 aa12.86□□□□□ -0.35
CUL3-210ENST00000484081 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
CUL3-210ENST00000484081 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.83□□□□□ -0.36
CUL3-210ENST00000484081 PLPP6Q8IY26 295 aa12.8□□□□□ -0.36
CUL3-210ENST00000484081 BCANQ96GW7 911 aa12.79□□□□□ -0.36
CUL3-210ENST00000484081 ARIH1Q9Y4X5 557 aaPredicted RBP12.79□□□□□ -0.36
CUL3-210ENST00000484081 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
CUL3-210ENST00000484081 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
CUL3-210ENST00000484081 MAMSTRQ6ZN01 415 aa12.75□□□□□ -0.37
CUL3-210ENST00000484081 SCUBE2Q9NQ36 999 aa12.73□□□□□ -0.37
CUL3-210ENST00000484081 LHX8Q68G74 356 aa12.69□□□□□ -0.38
CUL3-210ENST00000484081 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
CUL3-210ENST00000484081 OTUD5Q96G74 571 aa12.69□□□□□ -0.38
CUL3-210ENST00000484081 NBR1Q14596 966 aa12.68□□□□□ -0.38
CUL3-210ENST00000484081 SLC34A2O95436 690 aa12.67□□□□□ -0.38
CUL3-210ENST00000484081 OXER1Q8TDS5 423 aa12.67□□□□□ -0.38
CUL3-210ENST00000484081 DPYSL4O14531 572 aa12.65□□□□□ -0.38
CUL3-210ENST00000484081 PTCD2Q8WV60 388 aaKnown RBP12.65□□□□□ -0.38
CUL3-210ENST00000484081 HOXB3P14651 431 aaPredicted RBP12.62□□□□□ -0.39
CUL3-210ENST00000484081 PDIA6Q15084 440 aa12.62□□□□□ -0.39
CUL3-210ENST00000484081 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
CUL3-210ENST00000484081 SEMA3EO15041 775 aa12.59□□□□□ -0.39
CUL3-210ENST00000484081 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
CUL3-210ENST00000484081 SPDYE16A6NNV3 312 aaPredicted RBP12.57□□□□□ -0.4
CUL3-210ENST00000484081 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
CUL3-210ENST00000484081 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
CUL3-210ENST00000484081 PCDHGA4Q9Y5G9 962 aa12.54□□□□□ -0.4
CUL3-210ENST00000484081 KDM4FA0A1W2PPD8 638 aa12.53□□□□□ -0.4
CUL3-210ENST00000484081 TBC1D12O60347 775 aa12.52□□□□□ -0.41
CUL3-210ENST00000484081 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
CUL3-210ENST00000484081 EVI5O60447 810 aa12.5□□□□□ -0.41
CUL3-210ENST00000484081 MLLT3P42568 568 aaPredicted RBP12.5□□□□□ -0.41
CUL3-210ENST00000484081 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
CUL3-210ENST00000484081 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
CUL3-210ENST00000484081 PTGER2P43116 358 aa12.49□□□□□ -0.41
CUL3-210ENST00000484081 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
CUL3-210ENST00000484081 SNPHO15079 494 aa12.47□□□□□ -0.41
CUL3-210ENST00000484081 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
CUL3-210ENST00000484081 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
CUL3-210ENST00000484081 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.42
CUL3-210ENST00000484081 ZNF710Q8N1W2 664 aa12.42□□□□□ -0.42
CUL3-210ENST00000484081 NUDT7P0C024 238 aa12.41□□□□□ -0.42
CUL3-210ENST00000484081 SMYD5Q6GMV2 418 aa12.41□□□□□ -0.42
CUL3-210ENST00000484081 LMOD2Q6P5Q4 547 aa12.41□□□□□ -0.42
CUL3-210ENST00000484081 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
CUL3-210ENST00000484081 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
CUL3-210ENST00000484081 DDX12PQ92771 950 aa12.39□□□□□ -0.43
CUL3-210ENST00000484081 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
CUL3-210ENST00000484081 OSBPP22059 807 aa12.38□□□□□ -0.43
CUL3-210ENST00000484081 TULP1O00294 542 aaPredicted RBP12.37□□□□□ -0.43
CUL3-210ENST00000484081 PHF14O94880 888 aa12.35□□□□□ -0.43
CUL3-210ENST00000484081 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
CUL3-210ENST00000484081 RBM26Q5T8P6 1007 aaKnown RBP12.35□□□□□ -0.43
CUL3-210ENST00000484081 JPH4Q96JJ6 628 aa12.34□□□□□ -0.43
CUL3-210ENST00000484081 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
CUL3-210ENST00000484081 ST18O60284 1047 aa12.32□□□□□ -0.44
CUL3-210ENST00000484081 FOSBP53539 338 aa12.32□□□□□ -0.44
CUL3-210ENST00000484081 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
CUL3-210ENST00000484081 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
CUL3-210ENST00000484081 EPAS1Q99814 870 aa12.31□□□□□ -0.44
CUL3-210ENST00000484081 PRKCSHP14314 528 aaPredicted RBP12.29□□□□□ -0.44
CUL3-210ENST00000484081 EN1Q05925 392 aaPredicted RBP12.28□□□□□ -0.44
CUL3-210ENST00000484081 LCE2DQ5TA82 110 aaPredicted RBP12.28□□□□□ -0.44
CUL3-210ENST00000484081 TYW1BQ6NUM6 668 aa12.27□□□□□ -0.45
CUL3-210ENST00000484081 ZC3H15Q8WU90 426 aaKnown RBP12.27□□□□□ -0.45
CUL3-210ENST00000484081 GPR37O15354 613 aa12.26□□□□□ -0.45
CUL3-210ENST00000484081 ZNF454Q8N9F8 522 aa12.26□□□□□ -0.45
CUL3-210ENST00000484081 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
CUL3-210ENST00000484081 GPIHBP1Q8IV16 184 aa12.24□□□□□ -0.45
CUL3-210ENST00000484081 ZDHHC16Q969W1 377 aa12.24□□□□□ -0.45
CUL3-210ENST00000484081 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
CUL3-210ENST00000484081 FAM163AQ96GL9 167 aaPredicted RBP12.22□□□□□ -0.45
CUL3-210ENST00000484081 ADAM33Q9BZ11 813 aa12.21□□□□□ -0.45
CUL3-210ENST00000484081 ZMYND10O75800 440 aa12.2□□□□□ -0.46
CUL3-210ENST00000484081 TSR1Q2NL82 804 aaKnown RBP12.2□□□□□ -0.46
CUL3-210ENST00000484081 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
CUL3-210ENST00000484081 MAP3K7O43318 606 aa12.19□□□□□ -0.46
CUL3-210ENST00000484081 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
CUL3-210ENST00000484081 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
CUL3-210ENST00000484081 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
CUL3-210ENST00000484081 NPDC1Q9NQX5 325 aaPredicted RBP12.19□□□□□ -0.46
CUL3-210ENST00000484081 NUTM2FA1L443 756 aa12.18□□□□□ -0.46
CUL3-210ENST00000484081 PTGDRQ13258 359 aa12.18□□□□□ -0.46
CUL3-210ENST00000484081 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms