RNA–Protein interactions for RNA: ENST00000484081.1

CUL3-210, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-210ENST00000484081 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
CUL3-210ENST00000484081 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
CUL3-210ENST00000484081 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
CUL3-210ENST00000484081 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
CUL3-210ENST00000484081 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
CUL3-210ENST00000484081 FOXD1Q16676 465 aa21.44■■□□□ 1.02
CUL3-210ENST00000484081 PPP6R1Q9UPN7 881 aa20.8■□□□□ 0.92
CUL3-210ENST00000484081 ADRA2BP18089 450 aa20.75■□□□□ 0.91
CUL3-210ENST00000484081 PIAS4Q8N2W9 510 aaPredicted RBP20.21■□□□□ 0.83
CUL3-210ENST00000484081 MSH5O43196 834 aa19.65■□□□□ 0.74
CUL3-210ENST00000484081 PPP4R3CPQ6ZMV5 832 aa19.27■□□□□ 0.68
CUL3-210ENST00000484081 KCNA4P22459 653 aa19.05■□□□□ 0.64
CUL3-210ENST00000484081 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
CUL3-210ENST00000484081 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
CUL3-210ENST00000484081 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
CUL3-210ENST00000484081 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
CUL3-210ENST00000484081 NPM3O75607 178 aaKnown RBP18.57■□□□□ 0.56
CUL3-210ENST00000484081 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
CUL3-210ENST00000484081 RNF216Q9NWF9 866 aaPredicted RBP18.29■□□□□ 0.52
CUL3-210ENST00000484081 HOXD11P31277 338 aaPredicted RBP18.2■□□□□ 0.5
CUL3-210ENST00000484081 SLC4A1APQ9BWU0 796 aaKnown RBP18.13■□□□□ 0.49
CUL3-210ENST00000484081 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
CUL3-210ENST00000484081 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
CUL3-210ENST00000484081 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
CUL3-210ENST00000484081 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
CUL3-210ENST00000484081 ZBTB22O15209 634 aa17.58■□□□□ 0.4
CUL3-210ENST00000484081 DCAF8L1A6NGE4 600 aa17.55■□□□□ 0.4
CUL3-210ENST00000484081 SLC4A2P04920 1241 aa17.52■□□□□ 0.4
CUL3-210ENST00000484081 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
CUL3-210ENST00000484081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
CUL3-210ENST00000484081 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
CUL3-210ENST00000484081 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
CUL3-210ENST00000484081 RNF39Q9H2S5 420 aa16.9■□□□□ 0.3
CUL3-210ENST00000484081 ATXN8OSP0DMR3 200 aa16.86■□□□□ 0.29
CUL3-210ENST00000484081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
CUL3-210ENST00000484081 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
CUL3-210ENST00000484081 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
CUL3-210ENST00000484081 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
CUL3-210ENST00000484081 C1QBPQ07021 282 aaKnown RBP16.68■□□□□ 0.26
CUL3-210ENST00000484081 APLP2Q06481 763 aa16.59■□□□□ 0.25
CUL3-210ENST00000484081 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
CUL3-210ENST00000484081 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
CUL3-210ENST00000484081 CAPN15O75808 1086 aa16.37■□□□□ 0.21
CUL3-210ENST00000484081 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
CUL3-210ENST00000484081 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
CUL3-210ENST00000484081 POLA2Q14181 598 aa16.16■□□□□ 0.18
CUL3-210ENST00000484081 DSG3P32926 999 aa16.15■□□□□ 0.18
CUL3-210ENST00000484081 ABCB7O75027 752 aa16.09■□□□□ 0.17
CUL3-210ENST00000484081 MKRN4PQ13434 485 aaPredicted RBP15.99■□□□□ 0.15
CUL3-210ENST00000484081 FBLN2P98095 1184 aa15.88■□□□□ 0.13
CUL3-210ENST00000484081 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
CUL3-210ENST00000484081 FKBP8Q14318 412 aa15.84■□□□□ 0.13
CUL3-210ENST00000484081 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
CUL3-210ENST00000484081 OSCARQ8IYS5 282 aa15.61■□□□□ 0.09
CUL3-210ENST00000484081 PROM2Q8N271 834 aa15.53■□□□□ 0.08
CUL3-210ENST00000484081 SPDYE2BA6NHP3 402 aa15.51■□□□□ 0.07
CUL3-210ENST00000484081 SPDYE6P0CI01 402 aa15.51■□□□□ 0.07
CUL3-210ENST00000484081 SPDYE2Q495Y8 402 aa15.51■□□□□ 0.07
CUL3-210ENST00000484081 SSUH2Q9Y2M2 353 aa15.45■□□□□ 0.06
CUL3-210ENST00000484081 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
CUL3-210ENST00000484081 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
CUL3-210ENST00000484081 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
CUL3-210ENST00000484081 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
CUL3-210ENST00000484081 FBXO3Q9UK99 471 aa15.2■□□□□ 0.02
CUL3-210ENST00000484081 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
CUL3-210ENST00000484081 VASPP50552 380 aaPredicted RBP15.03■□□□□ -0
CUL3-210ENST00000484081 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
CUL3-210ENST00000484081 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
CUL3-210ENST00000484081 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
CUL3-210ENST00000484081 IFNLR1Q8IU57 520 aaPredicted RBP14.88□□□□□ -0.03
CUL3-210ENST00000484081 CLEC11AQ9Y240 323 aa14.86□□□□□ -0.03
CUL3-210ENST00000484081 MIER1Q8N108 512 aa14.78□□□□□ -0.04
CUL3-210ENST00000484081 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
CUL3-210ENST00000484081 AMER1Q5JTC6 1135 aaPredicted RBP14.77□□□□□ -0.05
CUL3-210ENST00000484081 PLCD3Q8N3E9 789 aa14.76□□□□□ -0.05
CUL3-210ENST00000484081 RTN4Q9NQC3 1192 aaKnown RBP14.76□□□□□ -0.05
CUL3-210ENST00000484081 CREBZFQ9NS37 354 aa14.7□□□□□ -0.06
CUL3-210ENST00000484081 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
CUL3-210ENST00000484081 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
CUL3-210ENST00000484081 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
CUL3-210ENST00000484081 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
CUL3-210ENST00000484081 SPOCK2Q92563 424 aa14.61□□□□□ -0.07
CUL3-210ENST00000484081 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
CUL3-210ENST00000484081 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.072e-7■■□□□ 13.2
CUL3-210ENST00000484081 CHADLQ6NUI6 762 aa14.53□□□□□ -0.08
CUL3-210ENST00000484081 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
CUL3-210ENST00000484081 PRKAR2AP13861 404 aaKnown RBP14.48□□□□□ -0.09
CUL3-210ENST00000484081 NUBP1P53384 320 aa14.48□□□□□ -0.09
CUL3-210ENST00000484081 PKD2Q13563 968 aa14.46□□□□□ -0.09
CUL3-210ENST00000484081 FARP1Q9Y4F1 1045 aaPredicted RBP14.42□□□□□ -0.1
CUL3-210ENST00000484081 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
CUL3-210ENST00000484081 RASEFQ8IZ41 740 aa14.35□□□□□ -0.11
CUL3-210ENST00000484081 CIZ1Q9ULV3 898 aaPredicted RBP14.31□□□□□ -0.12
CUL3-210ENST00000484081 GSE1Q14687 1217 aa14.3□□□□□ -0.12
CUL3-210ENST00000484081 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
CUL3-210ENST00000484081 ECM2O94769 699 aaPredicted RBP14.25□□□□□ -0.13
CUL3-210ENST00000484081 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
CUL3-210ENST00000484081 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
CUL3-210ENST00000484081 RGL2O15211 777 aa14.16□□□□□ -0.14
CUL3-210ENST00000484081 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms