RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 PLCH2O75038 1416 aa28.91■■■□□ 2.22
PCCB-216ENST00000483687 GLI2P10070 1586 aa28.91■■■□□ 2.22
PCCB-216ENST00000483687 TCOF1Q13428 1488 aaKnown RBP28.89■■■□□ 2.22
PCCB-216ENST00000483687 ZNF777Q9ULD5 760 aaPredicted RBP28.89■■■□□ 2.21
PCCB-216ENST00000483687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.87■■■□□ 2.21
PCCB-216ENST00000483687 CD109Q6YHK3 1445 aa28.87■■■□□ 2.21
PCCB-216ENST00000483687 ARAP3Q8WWN8 1544 aa28.87■■■□□ 2.21
PCCB-216ENST00000483687 FAM69CQ0P6D2 419 aa28.87■■■□□ 2.21
PCCB-216ENST00000483687 CAMSAP2Q08AD1 1489 aa28.85■■■□□ 2.21
PCCB-216ENST00000483687 ZNF644Q9H582 1327 aaPredicted RBP28.85■■■□□ 2.21
PCCB-216ENST00000483687 MAP3K4Q9Y6R4 1608 aa28.85■■■□□ 2.21
PCCB-216ENST00000483687 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
PCCB-216ENST00000483687 SAMD9LQ8IVG5 1584 aa28.82■■■□□ 2.2
PCCB-216ENST00000483687 EFCAB2Q5VUJ9 269 aa28.81■■■□□ 2.2
PCCB-216ENST00000483687 FANCAO15360 1455 aa28.79■■■□□ 2.2
PCCB-216ENST00000483687 ITGAEP38570 1179 aa28.79■■■□□ 2.2
PCCB-216ENST00000483687 TSPOAP1O95153 1857 aa28.73■■■□□ 2.19
PCCB-216ENST00000483687 CFAP74Q9C0B2 1584 aa28.73■■■□□ 2.19
PCCB-216ENST00000483687 PLEKHH2Q8IVE3 1493 aa28.73■■■□□ 2.19
PCCB-216ENST00000483687 DNMT1P26358 1616 aaKnown RBP28.72■■■□□ 2.19
PCCB-216ENST00000483687 SYCP2Q9BX26 1530 aa28.71■■■□□ 2.19
PCCB-216ENST00000483687 ABCC1P33527 1531 aa28.7■■■□□ 2.18
PCCB-216ENST00000483687 DAPK1P53355 1430 aa28.69■■■□□ 2.18
PCCB-216ENST00000483687 KIAA1107Q9UPP5 1409 aa28.69■■■□□ 2.18
PCCB-216ENST00000483687 HNRNPMP52272 730 aaKnown RBP eCLIP28.69■■■□□ 2.181e-7■■■□□ 18.3
PCCB-216ENST00000483687 AKNAQ7Z591 1439 aa28.68■■■□□ 2.18
PCCB-216ENST00000483687 MBD5Q9P267 1494 aa28.67■■■□□ 2.18
PCCB-216ENST00000483687 ARHGEF5Q12774 1597 aa28.67■■■□□ 2.18
PCCB-216ENST00000483687 PPRC1Q5VV67 1664 aaKnown RBP28.67■■■□□ 2.18
PCCB-216ENST00000483687 ABCC5O15440 1437 aa28.66■■■□□ 2.18
PCCB-216ENST00000483687 ADGRL1O94910 1474 aa28.66■■■□□ 2.18
PCCB-216ENST00000483687 NEO1Q92859 1461 aa28.66■■■□□ 2.18
PCCB-216ENST00000483687 PTPRKQ15262 1439 aa28.65■■■□□ 2.18
PCCB-216ENST00000483687 ARHGEF12Q9NZN5 1544 aa28.64■■■□□ 2.18
PCCB-216ENST00000483687 TRHP20396 242 aaPredicted RBP28.64■■■□□ 2.18
PCCB-216ENST00000483687 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.17
PCCB-216ENST00000483687 TEX14Q8IWB6 1497 aa28.63■■■□□ 2.17
PCCB-216ENST00000483687 CCDC141Q6ZP82 1450 aa28.62■■■□□ 2.17
PCCB-216ENST00000483687 RSPH4AQ5TD94 716 aa28.62■■■□□ 2.17
PCCB-216ENST00000483687 SCAPERQ9BY12 1400 aa28.6■■■□□ 2.17
PCCB-216ENST00000483687 CHIC2Q9UKJ5 165 aa28.58■■■□□ 2.17
PCCB-216ENST00000483687 TSPY4P0CV99 314 aa28.57■■■□□ 2.16
PCCB-216ENST00000483687 TSPY10P0CW01 314 aa28.57■■■□□ 2.16
PCCB-216ENST00000483687 SHANK2Q9UPX8 1470 aa28.57■■■□□ 2.16
PCCB-216ENST00000483687 TRAPPC8Q9Y2L5 1435 aa28.56■■■□□ 2.16
PCCB-216ENST00000483687 C9orf84Q5VXU9 1444 aa28.54■■■□□ 2.16
PCCB-216ENST00000483687 ADGBQ8N7X0 1667 aa28.53■■■□□ 2.16
PCCB-216ENST00000483687 AFAP1Q8N556 730 aa28.51■■■□□ 2.15
PCCB-216ENST00000483687 ZNF518AQ6AHZ1 1483 aa28.5■■■□□ 2.15
PCCB-216ENST00000483687 ROCK1Q13464 1354 aa28.49■■■□□ 2.15
PCCB-216ENST00000483687 POGZQ7Z3K3 1410 aa28.49■■■□□ 2.15
PCCB-216ENST00000483687 DENND4BO75064 1496 aaPredicted RBP28.49■■■□□ 2.15
PCCB-216ENST00000483687 MAST1Q9Y2H9 1570 aa28.49■■■□□ 2.15
PCCB-216ENST00000483687 ADGRL2O95490 1459 aa28.48■■■□□ 2.15
PCCB-216ENST00000483687 RRP7BPQ9NSQ0 103 aa28.46■■■□□ 2.15
PCCB-216ENST00000483687 HFM1A2PYH4 1435 aa28.46■■■□□ 2.15
PCCB-216ENST00000483687 ANKRD30AQ9BXX3 1397 aa28.46■■■□□ 2.15
PCCB-216ENST00000483687 NCOA1Q15788 1441 aa28.45■■■□□ 2.14
PCCB-216ENST00000483687 SPAG9O60271 1321 aaKnown RBP28.44■■■□□ 2.14
PCCB-216ENST00000483687 RICTORQ6R327 1708 aa28.44■■■□□ 2.14
PCCB-216ENST00000483687 KDM5CP41229 1560 aa28.43■■■□□ 2.14
PCCB-216ENST00000483687 RAPGEF3O95398 923 aa28.43■■■□□ 2.14
PCCB-216ENST00000483687 SETD5Q9C0A6 1442 aa28.42■■■□□ 2.14
PCCB-216ENST00000483687 GCC2Q8IWJ2 1684 aa28.42■■■□□ 2.14
PCCB-216ENST00000483687 NAIPQ13075 1403 aa28.42■■■□□ 2.14
PCCB-216ENST00000483687 ZFYVE16Q7Z3T8 1539 aa28.41■■■□□ 2.14
PCCB-216ENST00000483687 RTEL1-TNFRSF6BF6WH68 1400 aa28.4■■■□□ 2.14
PCCB-216ENST00000483687 INO80Q9ULG1 1556 aaPredicted RBP28.4■■■□□ 2.14
PCCB-216ENST00000483687 ATP7AQ04656 1500 aa28.39■■■□□ 2.14
PCCB-216ENST00000483687 PLXNC1O60486 1568 aa28.39■■■□□ 2.13
PCCB-216ENST00000483687 MYT1LQ9UL68 1186 aa28.38■■■□□ 2.13
PCCB-216ENST00000483687 FRMPD1Q5SYB0 1578 aa28.37■■■□□ 2.13
PCCB-216ENST00000483687 HECW2Q9P2P5 1572 aa28.36■■■□□ 2.13
PCCB-216ENST00000483687 RAB3GAP2Q9H2M9 1393 aa28.36■■■□□ 2.13
PCCB-216ENST00000483687 KIF15Q9NS87 1388 aa28.36■■■□□ 2.13
PCCB-216ENST00000483687 KIDINS220Q9ULH0 1771 aa28.35■■■□□ 2.13
PCCB-216ENST00000483687 MLH3Q9UHC1 1453 aa28.34■■■□□ 2.13
PCCB-216ENST00000483687 COL17A1Q9UMD9 1497 aaPredicted RBP28.33■■■□□ 2.13
PCCB-216ENST00000483687 ZMYM4Q5VZL5 1548 aa28.3■■■□□ 2.12
PCCB-216ENST00000483687 KDM6BO15054 1643 aa28.28■■■□□ 2.12
PCCB-216ENST00000483687 ANKRD50Q9ULJ7 1429 aa28.28■■■□□ 2.12
PCCB-216ENST00000483687 DUOX2Q9NRD8 1548 aa28.27■■■□□ 2.12
PCCB-216ENST00000483687 HRCP23327 699 aa28.25■■■□□ 2.11
PCCB-216ENST00000483687 ABCA6Q8N139 1617 aa28.24■■■□□ 2.11
PCCB-216ENST00000483687 MAGI2Q86UL8 1455 aa28.23■■■□□ 2.11
PCCB-216ENST00000483687 ERBINQ96RT1 1412 aa28.21■■■□□ 2.11
PCCB-216ENST00000483687 DIP2CQ9Y2E4 1556 aa28.2■■■□□ 2.1
PCCB-216ENST00000483687 YEATS2Q9ULM3 1422 aa28.19■■■□□ 2.1
PCCB-216ENST00000483687 DHX29Q7Z478 1369 aaKnown RBP28.17■■■□□ 2.1
PCCB-216ENST00000483687 A2MP01023 1474 aa28.16■■■□□ 2.1
PCCB-216ENST00000483687 TRIM52Q96A61 297 aa28.13■■■□□ 2.09
PCCB-216ENST00000483687 ACIN1Q9UKV3 1341 aaKnown RBP28.13■■■□□ 2.09
PCCB-216ENST00000483687 ARHGEF40Q8TER5 1519 aa28.12■■■□□ 2.09
PCCB-216ENST00000483687 EIF2AK4Q9P2K8 1649 aaKnown RBP28.12■■■□□ 2.09
PCCB-216ENST00000483687 ATP10AO60312 1499 aa28.09■■■□□ 2.09
PCCB-216ENST00000483687 DHX57Q6P158 1386 aaKnown RBP28.07■■■□□ 2.08
PCCB-216ENST00000483687 CCER1Q8TC90 406 aaPredicted RBP28.06■■■□□ 2.08
PCCB-216ENST00000483687 UNC13BO14795 1591 aa28.06■■■□□ 2.08
PCCB-216ENST00000483687 KIF3BO15066 747 aa28.05■■■□□ 2.08
PCCB-216ENST00000483687 REREQ9P2R6 1566 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms